| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025843
Identifier: 238025843
GI number: 238025843
Start: 177425
End: 177748
Strand: Reverse
Name: 238025843
Synonym: bglu_1g01690
Alternate gene names: NA
Gene position: 177748-177425 (Counterclockwise)
Preceding gene: 238025844
Following gene: 238025842
Centisome position: 4.55
GC content: 67.28
Gene sequence:
>324_bases ATGGGAGAAACGGACATGGAACAGCACACCCTGGTAAGCCAGGTCCTGGCGATGACGCACGACATCGAGCGCGCGGTGCG CCTGGCCGACTGGGCCAGCGTCGAGCGGCTGGTGGCGGCACGCAACCCCTACCTGATGTCGATCGAGGCCGAGCAGTCGC CCGAGAGCCTGCTGATGATCCGCGAGATCCAGGCCATCGACGCGGCCGTGCTCGCCGAATCGACGCAGACGCGCGACGAG CTGCAGGTCGAATACCGCAGCGCGATCGAGCGCGTCAACGCGGCTCGCCAGTACAGCCAGACCGCCGCCGCGCTGCACTA TTGA
Upstream 100 bases:
>100_bases CACGGTGCTGGCCGCGATGACGACCAACCAGAACTACCTGACCCAGCTGTTCGGCGGCACCAACAGCGCCGGCGCGCTCG CCACCAACAAGTAAGCGGTC
Downstream 100 bases:
>100_bases GCGCGAACCGATCCGAATAAACACAATTCACGCGCACGAGCGCGTGCTCGTTCACCTCCAAGCCCGCCCCGCGCGGGCTT TTTTTTGCTTCGTCACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGETDMEQHTLVSQVLAMTHDIERAVRLADWASVERLVAARNPYLMSIEAEQSPESLLMIREIQAIDAAVLAESTQTRDE LQVEYRSAIERVNAARQYSQTAAALHY
Sequences:
>Translated_107_residues MGETDMEQHTLVSQVLAMTHDIERAVRLADWASVERLVAARNPYLMSIEAEQSPESLLMIREIQAIDAAVLAESTQTRDE LQVEYRSAIERVNAARQYSQTAAALHY >Mature_106_residues GETDMEQHTLVSQVLAMTHDIERAVRLADWASVERLVAARNPYLMSIEAEQSPESLLMIREIQAIDAAVLAESTQTRDEL QVEYRSAIERVNAARQYSQTAAALHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12075; Mature: 11944
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGETDMEQHTLVSQVLAMTHDIERAVRLADWASVERLVAARNPYLMSIEAEQSPESLLMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH REIQAIDAAVLAESTQTRDELQVEYRSAIERVNAARQYSQTAAALHY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GETDMEQHTLVSQVLAMTHDIERAVRLADWASVERLVAARNPYLMSIEAEQSPESLLMI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH REIQAIDAAVLAESTQTRDELQVEYRSAIERVNAARQYSQTAAALHY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA