Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025822

Identifier: 238025822

GI number: 238025822

Start: 150316

End: 151128

Strand: Reverse

Name: 238025822

Synonym: bglu_1g01470

Alternate gene names: NA

Gene position: 151128-150316 (Counterclockwise)

Preceding gene: 238025825

Following gene: 238025821

Centisome position: 3.87

GC content: 64.08

Gene sequence:

>813_bases
ATGGCAACCAACAAAACGAAGTTTTTCCGCGTAGCAGTCGAAGGCGCGACTGTCGACGGCCGCGAAATCAAGCGTGAATG
GCTCACGCAGATGGCGAAGAACTACAACCGCGAACTGTACGGCGCACGCCTGAACATCGAGCACCTGAAGGGATGGGCAC
CGCTCTCGGCCACCAACCCGTTCGGCGCATACGGCGACGTGATCGCGCTGAAGGCATCCGAGATCGAAGACGGCCCGCTG
AAAGGCAAGATGGGGCTGTACGCGCAGCTCGATCCGACCGACGAGCTGGTCGCGCTGTCGAAGAAACGCCAGAAGGTTTT
CACGTCGATCGAAGTCAATCCCGACTTCGCCGACATCGGCGAGGCGTATCTGGTCGGCCTGGCCGCGACCGACGATCCGG
CGAGCCTCGGCACCGAAGCCCTGCAATTCGCAGCACGTCGTTCGAACAACCTGTTCTCGGCCGCGTGCGAAACGTTGATC
GAGTTCGACGGCGAGCCCGAATCAACGAGCCTGCTGTCTATTGTGAAGAGCATGTTCGCGCGCAATCGCTCGACCGACGA
CCAACGCGACGCCGACGTGCGCCACGCAGTCGAAGAAATCGCCGGTTTCGTGAGCCAGCAGGGCTGCGACGTCGCCGCGC
TGCGCGTCGACCTCACCGCCGCGCAGCAAGACGCGGCCGCCGCGAAAAAGCGCGCCGACGAAGCGGTCACCGCCGTCGAA
GCACTGACCACGAAGCTGTCGGCGACCGATAACGGCGCACCGCGGCGCCAGCTGTCGACCGGCTCGACCGGCGAGCTCGC
GACCGACTGCTGA

Upstream 100 bases:

>100_bases
TACGTACCCGTGCGAGCAACATACGCCGCTCGTTGAGCCGTAGCGCGTGAAGGTCGAACATGAGAACCACATTCACTGAC
CCACGGTTCGACCTCTCTCT

Downstream 100 bases:

>100_bases
TCCCTTCCACGCTCACACCCCGGAGAATCCAACTCATGAAGAAGGAAACGCGCCAAGCGTACCGAAAGTACGCCACGCAA
ATTGCCAAGCTGAACGACAC

Product: phage capsid scaffolding protein (GPO)

Products: NA

Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; V Protein Bacteriophage; Scaffold Protein; Presumed Capsid-Scaffolding Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Scaffold; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MATNKTKFFRVAVEGATVDGREIKREWLTQMAKNYNRELYGARLNIEHLKGWAPLSATNPFGAYGDVIALKASEIEDGPL
KGKMGLYAQLDPTDELVALSKKRQKVFTSIEVNPDFADIGEAYLVGLAATDDPASLGTEALQFAARRSNNLFSAACETLI
EFDGEPESTSLLSIVKSMFARNRSTDDQRDADVRHAVEEIAGFVSQQGCDVAALRVDLTAAQQDAAAAKKRADEAVTAVE
ALTTKLSATDNGAPRRQLSTGSTGELATDC

Sequences:

>Translated_270_residues
MATNKTKFFRVAVEGATVDGREIKREWLTQMAKNYNRELYGARLNIEHLKGWAPLSATNPFGAYGDVIALKASEIEDGPL
KGKMGLYAQLDPTDELVALSKKRQKVFTSIEVNPDFADIGEAYLVGLAATDDPASLGTEALQFAARRSNNLFSAACETLI
EFDGEPESTSLLSIVKSMFARNRSTDDQRDADVRHAVEEIAGFVSQQGCDVAALRVDLTAAQQDAAAAKKRADEAVTAVE
ALTTKLSATDNGAPRRQLSTGSTGELATDC
>Mature_269_residues
ATNKTKFFRVAVEGATVDGREIKREWLTQMAKNYNRELYGARLNIEHLKGWAPLSATNPFGAYGDVIALKASEIEDGPLK
GKMGLYAQLDPTDELVALSKKRQKVFTSIEVNPDFADIGEAYLVGLAATDDPASLGTEALQFAARRSNNLFSAACETLIE
FDGEPESTSLLSIVKSMFARNRSTDDQRDADVRHAVEEIAGFVSQQGCDVAALRVDLTAAQQDAAAAKKRADEAVTAVEA
LTTKLSATDNGAPRRQLSTGSTGELATDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29082; Mature: 28951

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNKTKFFRVAVEGATVDGREIKREWLTQMAKNYNRELYGARLNIEHLKGWAPLSATNP
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHCCCCCCCCCCC
FGAYGDVIALKASEIEDGPLKGKMGLYAQLDPTDELVALSKKRQKVFTSIEVNPDFADIG
CCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCHHHCC
EAYLVGLAATDDPASLGTEALQFAARRSNNLFSAACETLIEFDGEPESTSLLSIVKSMFA
HHHEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RNRSTDDQRDADVRHAVEEIAGFVSQQGCDVAALRVDLTAAQQDAAAAKKRADEAVTAVE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
ALTTKLSATDNGAPRRQLSTGSTGELATDC
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATNKTKFFRVAVEGATVDGREIKREWLTQMAKNYNRELYGARLNIEHLKGWAPLSATNP
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHCCCCCCCCCCC
FGAYGDVIALKASEIEDGPLKGKMGLYAQLDPTDELVALSKKRQKVFTSIEVNPDFADIG
CCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCHHHCC
EAYLVGLAATDDPASLGTEALQFAARRSNNLFSAACETLIEFDGEPESTSLLSIVKSMFA
HHHEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RNRSTDDQRDADVRHAVEEIAGFVSQQGCDVAALRVDLTAAQQDAAAAKKRADEAVTAVE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
ALTTKLSATDNGAPRRQLSTGSTGELATDC
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA