| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025821
Identifier: 238025821
GI number: 238025821
Start: 149267
End: 150280
Strand: Reverse
Name: 238025821
Synonym: bglu_1g01460
Alternate gene names: NA
Gene position: 150280-149267 (Counterclockwise)
Preceding gene: 238025822
Following gene: 238025820
Centisome position: 3.85
GC content: 59.76
Gene sequence:
>1014_bases ATGAAGAAGGAAACGCGCCAAGCGTACCGAAAGTACGCCACGCAAATTGCCAAGCTGAACGACACCGACGACGTATCGCA GAAATTCGCTGTCGAGCCGTCCGTCCAGCAAACGGTGGAAACCAAAATGCAGGAATCGAGCGCATTCCTGAAGAGCATCA ACGTTCTGCCCGTGACCGAGCTGGAAGGCGAAAAGCTCGGCCTGTCGGTATCCGGTCCGATCGCGAGCCGCACCGACACA ACGAAGGCCGAACGTCAGCCAGTCGATCCGACCGCGCTCGATAGCAACCGCTACCGCTGCGAGAAAACCGACTACGACAC GGCCATTACGTACCGCAAGCTCGACGCCTGGGCAAAATTCCCCGACTTCCAACAGCGCATCCGCAATGTGATCCTCAACC AGTCCGCGCTCGACCGGATCATGATCGGCTGGAACGGCGTTAAGGCAGCACTGTCGACGGACAAAGCAGCAAACCCGCTG TTGCAGGACGTGAACATCGGTTGGCTGCAACAGTATCGCGACCGTGCGTCGCACCGCGTGCTGCACGAAGGCGCGAAGGA AGCCGGCAAGGTGCTCGTCGGTAAGGGCGGTGACTACGTAAATCTCGACGCGCTCGTGATGGACATTGTGTCGTCGATGA TCGACCCGTGGTTCCAGGAAGATACGGGGCTCGTCGTGATCTGCGGCCGCGAGCTGCTGCACGACAAGTATTTCCCGATC GTCAACACGACGCAGGCACCGACCGAGCAGCTCGCGGCCGACCTGATCGTCAGCCAGAAGCGCATCGGCAACCTGCCGGC CGTGCGTGTGCCGTTCTTCCCGAAGCGCGCGATGATGGTGACGAAGCTGGAAAACCTGTCGATCTACTTCCAGGAAGGCG CACGCCGTCGCTCGCTGATCGACAACCCGAAGCGCGACCAAATCGAGAACTACGAGTCGTCGAACGACGCGTATGTCGTC GAAGACTTTGGTTGCGGCTGTGTCTCGGAAAACATCGAGCTGGTGGCGGCATGA
Upstream 100 bases:
>100_bases ATAACGGCGCACCGCGGCGCCAGCTGTCGACCGGCTCGACCGGCGAGCTCGCGACCGACTGCTGATCCCTTCCACGCTCA CACCCCGGAGAATCCAACTC
Downstream 100 bases:
>100_bases CGATTAACACGCCCGCTCGCGCGCACTTCGCGCGCGTATCGGCCGCCCGCGCGGCGGCCGCGACGGCGCCCGGTCAGACG ATGGCCGGTGCGACGCCGTA
Product: Gp2, phage major capsid protein, P2 family
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Capsid Proteins; Phage Capsid Protein; Phage Capsid Protein; Capsid; Phage Gene; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKKETRQAYRKYATQIAKLNDTDDVSQKFAVEPSVQQTVETKMQESSAFLKSINVLPVTELEGEKLGLSVSGPIASRTDT TKAERQPVDPTALDSNRYRCEKTDYDTAITYRKLDAWAKFPDFQQRIRNVILNQSALDRIMIGWNGVKAALSTDKAANPL LQDVNIGWLQQYRDRASHRVLHEGAKEAGKVLVGKGGDYVNLDALVMDIVSSMIDPWFQEDTGLVVICGRELLHDKYFPI VNTTQAPTEQLAADLIVSQKRIGNLPAVRVPFFPKRAMMVTKLENLSIYFQEGARRRSLIDNPKRDQIENYESSNDAYVV EDFGCGCVSENIELVAA
Sequences:
>Translated_337_residues MKKETRQAYRKYATQIAKLNDTDDVSQKFAVEPSVQQTVETKMQESSAFLKSINVLPVTELEGEKLGLSVSGPIASRTDT TKAERQPVDPTALDSNRYRCEKTDYDTAITYRKLDAWAKFPDFQQRIRNVILNQSALDRIMIGWNGVKAALSTDKAANPL LQDVNIGWLQQYRDRASHRVLHEGAKEAGKVLVGKGGDYVNLDALVMDIVSSMIDPWFQEDTGLVVICGRELLHDKYFPI VNTTQAPTEQLAADLIVSQKRIGNLPAVRVPFFPKRAMMVTKLENLSIYFQEGARRRSLIDNPKRDQIENYESSNDAYVV EDFGCGCVSENIELVAA >Mature_337_residues MKKETRQAYRKYATQIAKLNDTDDVSQKFAVEPSVQQTVETKMQESSAFLKSINVLPVTELEGEKLGLSVSGPIASRTDT TKAERQPVDPTALDSNRYRCEKTDYDTAITYRKLDAWAKFPDFQQRIRNVILNQSALDRIMIGWNGVKAALSTDKAANPL LQDVNIGWLQQYRDRASHRVLHEGAKEAGKVLVGKGGDYVNLDALVMDIVSSMIDPWFQEDTGLVVICGRELLHDKYFPI VNTTQAPTEQLAADLIVSQKRIGNLPAVRVPFFPKRAMMVTKLENLSIYFQEGARRRSLIDNPKRDQIENYESSNDAYVV EDFGCGCVSENIELVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37868; Mature: 37868
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKETRQAYRKYATQIAKLNDTDDVSQKFAVEPSVQQTVETKMQESSAFLKSINVLPVTE CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECC LEGEKLGLSVSGPIASRTDTTKAERQPVDPTALDSNRYRCEKTDYDTAITYRKLDAWAKF CCCCEECEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC PDFQQRIRNVILNQSALDRIMIGWNGVKAALSTDKAANPLLQDVNIGWLQQYRDRASHRV HHHHHHHHHHHHCHHHHHHEEECCCCHHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHH LHEGAKEAGKVLVGKGGDYVNLDALVMDIVSSMIDPWFQEDTGLVVICGRELLHDKYFPI HHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHCHHHCCCCCEEEEECHHHHHCCCCCC VNTTQAPTEQLAADLIVSQKRIGNLPAVRVPFFPKRAMMVTKLENLSIYFQEGARRRSLI CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCEEEECCCCHHHHHC DNPKRDQIENYESSNDAYVVEDFGCGCVSENIELVAA CCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEC >Mature Secondary Structure MKKETRQAYRKYATQIAKLNDTDDVSQKFAVEPSVQQTVETKMQESSAFLKSINVLPVTE CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECC LEGEKLGLSVSGPIASRTDTTKAERQPVDPTALDSNRYRCEKTDYDTAITYRKLDAWAKF CCCCEECEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC PDFQQRIRNVILNQSALDRIMIGWNGVKAALSTDKAANPLLQDVNIGWLQQYRDRASHRV HHHHHHHHHHHHCHHHHHHEEECCCCHHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHH LHEGAKEAGKVLVGKGGDYVNLDALVMDIVSSMIDPWFQEDTGLVVICGRELLHDKYFPI HHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHCHHHCCCCCEEEEECHHHHHCCCCCC VNTTQAPTEQLAADLIVSQKRIGNLPAVRVPFFPKRAMMVTKLENLSIYFQEGARRRSLI CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCEEEECCCCHHHHHC DNPKRDQIENYESSNDAYVVEDFGCGCVSENIELVAA CCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA