| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025809
Identifier: 238025809
GI number: 238025809
Start: 143333
End: 144031
Strand: Reverse
Name: 238025809
Synonym: bglu_1g01340
Alternate gene names: NA
Gene position: 144031-143333 (Counterclockwise)
Preceding gene: 238025811
Following gene: 238025808
Centisome position: 3.69
GC content: 66.09
Gene sequence:
>699_bases ATGGATGCAAACGAAACTCACCGCAAAGCGCGCAACGCCGTTAGGAAGGGATCGATACTCGATATCGACCACGCGAACGC CTTGTGCCGCGTCGCAGTCGGCGAATCAGACGACGACGGCCTGCAAACGAACTGGATTCCCTGGATCGCGGGCTCGGCTG GCACCACGCGCGATTGGCTTCCACCGACGAGGGGTGAGCAGGTCGTGTTGCTCTGCCCGATGGGAGACCCGGCACAGGCC GTCGCCTTGCGCGGCTTCTATTCGGACGCGGCGCCGGCGCCCGACGCCTCGCCGAACACGCATACGCGCGTCTATCCGGA CGGCGCGCGCGTGACGTATGACCATGCCGGCCACTCGCTCGTGGCCGAGCTGCCGGCGGGCGCGACGGTGCGCATCGTCG CGCCCGTATCCGTCACGGTCGAAACGAAGGCCGCCACGATCAAGGCAGACACGGCGACCATCGATGCCGCGAACACGACC TGCACCGGCTCGCTCACGGTCAAGGGTCCATTTGCGTTCGAATCGGGCATGACCGGCAAGGGCGGCACCGAAGGCGGCCG CGGCTCCGTGATGCGAATCGACGGCTCGGCCGCCTTTACTGGCGATGTCACCGCCGGCCAGGTCAGTCTGCAATCGCACA AGCACCAGGCACAAGGCGAAAACGCGATTACCAGCCAGCCGATCTCAGGTGCCGCATGA
Upstream 100 bases:
>100_bases GGGGCCATGTCGCACCCGCGCGTGCCTAACACACCGTACTGACCGCCAACACAAACGGCATCGCTCGCACCACGCGCGAG GCTCCGGCAACATTGTCGGC
Downstream 100 bases:
>100_bases AGGGGATGAACGCCGCGACCGGCCGCGCGATCGGCGGCACCGATCACCTGGCGCAGTCGATCGCACGCATCCTCTCGACA CCGCTTGGCACCTGCATCCA
Product: bacteriophage baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Phage-Related Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Baseplate Assembly Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MDANETHRKARNAVRKGSILDIDHANALCRVAVGESDDDGLQTNWIPWIAGSAGTTRDWLPPTRGEQVVLLCPMGDPAQA VALRGFYSDAAPAPDASPNTHTRVYPDGARVTYDHAGHSLVAELPAGATVRIVAPVSVTVETKAATIKADTATIDAANTT CTGSLTVKGPFAFESGMTGKGGTEGGRGSVMRIDGSAAFTGDVTAGQVSLQSHKHQAQGENAITSQPISGAA
Sequences:
>Translated_232_residues MDANETHRKARNAVRKGSILDIDHANALCRVAVGESDDDGLQTNWIPWIAGSAGTTRDWLPPTRGEQVVLLCPMGDPAQA VALRGFYSDAAPAPDASPNTHTRVYPDGARVTYDHAGHSLVAELPAGATVRIVAPVSVTVETKAATIKADTATIDAANTT CTGSLTVKGPFAFESGMTGKGGTEGGRGSVMRIDGSAAFTGDVTAGQVSLQSHKHQAQGENAITSQPISGAA >Mature_232_residues MDANETHRKARNAVRKGSILDIDHANALCRVAVGESDDDGLQTNWIPWIAGSAGTTRDWLPPTRGEQVVLLCPMGDPAQA VALRGFYSDAAPAPDASPNTHTRVYPDGARVTYDHAGHSLVAELPAGATVRIVAPVSVTVETKAATIKADTATIDAANTT CTGSLTVKGPFAFESGMTGKGGTEGGRGSVMRIDGSAAFTGDVTAGQVSLQSHKHQAQGENAITSQPISGAA
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23888; Mature: 23888
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANETHRKARNAVRKGSILDIDHANALCRVAVGESDDDGLQTNWIPWIAGSAGTTRDWL CCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCC PPTRGEQVVLLCPMGDPAQAVALRGFYSDAAPAPDASPNTHTRVYPDGARVTYDHAGHSL CCCCCCEEEEEECCCCCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEE VAELPAGATVRIVAPVSVTVETKAATIKADTATIDAANTTCTGSLTVKGPFAFESGMTGK EEECCCCCEEEEEEEEEEEEEECEEEEEECCEEEECCCCEEEEEEEECCCCCCCCCCCCC GGTEGGRGSVMRIDGSAAFTGDVTAGQVSLQSHKHQAQGENAITSQPISGAA CCCCCCCCCEEEECCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDANETHRKARNAVRKGSILDIDHANALCRVAVGESDDDGLQTNWIPWIAGSAGTTRDWL CCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCC PPTRGEQVVLLCPMGDPAQAVALRGFYSDAAPAPDASPNTHTRVYPDGARVTYDHAGHSL CCCCCCEEEEEECCCCCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEE VAELPAGATVRIVAPVSVTVETKAATIKADTATIDAANTTCTGSLTVKGPFAFESGMTGK EEECCCCCEEEEEEEEEEEEEECEEEEEECCEEEECCCCEEEEEEEECCCCCCCCCCCCC GGTEGGRGSVMRIDGSAAFTGDVTAGQVSLQSHKHQAQGENAITSQPISGAA CCCCCCCCCEEEECCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA