| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025808
Identifier: 238025808
GI number: 238025808
Start: 142974
End: 143336
Strand: Reverse
Name: 238025808
Synonym: bglu_1g01330
Alternate gene names: NA
Gene position: 143336-142974 (Counterclockwise)
Preceding gene: 238025809
Following gene: 238025807
Centisome position: 3.67
GC content: 67.77
Gene sequence:
>363_bases ATGAAGGGGATGAACGCCGCGACCGGCCGCGCGATCGGCGGCACCGATCACCTGGCGCAGTCGATCGCACGCATCCTCTC GACACCGCTTGGCACCTGCATCCAGCGCCGCACCTTCGGCTCGGAGCTGCCCGAGCTCGTTGACGCACCGAACAACGGGG CCACGCGCATCCGCCTCTACGCCGCGACCGTCACCGCACTGATGCGCTGGGAACCGCGCCTGACCGTTACGCGCGTCCAG CTCGTAGCAGCGGGGGCGGATCTGCTCGACGGGCGCCAGTACATCGACATCGAAGGATGGACCGACGAGCGCGACGAGCT GACCACGCTGCGCGTGCCGATCTCGAATGGAACCAAGGCATGA
Upstream 100 bases:
>100_bases TTACTGGCGATGTCACCGCCGGCCAGGTCAGTCTGCAATCGCACAAGCACCAGGCACAAGGCGAAAACGCGATTACCAGC CAGCCGATCTCAGGTGCCGC
Downstream 100 bases:
>100_bases GAACCACCCCGATTGACCTGTCCCAGCTGCCGGCGCCGAGCATCGTCGATGCGATCGACTTTGAGACGCTGTACGCGCAG CGTCGCGCCAGTCTGCTGGC
Product: bacteriophage baseplate assembly protein W
Products: NA
Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; GpW/GP25 Family Protein; Phage P2 Baseplate Assembly W Protein; Phage-Related Baseplate Protein; Bacteriophage Baseplate Assembly Protein W; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKGMNAATGRAIGGTDHLAQSIARILSTPLGTCIQRRTFGSELPELVDAPNNGATRIRLYAATVTALMRWEPRLTVTRVQ LVAAGADLLDGRQYIDIEGWTDERDELTTLRVPISNGTKA
Sequences:
>Translated_120_residues MKGMNAATGRAIGGTDHLAQSIARILSTPLGTCIQRRTFGSELPELVDAPNNGATRIRLYAATVTALMRWEPRLTVTRVQ LVAAGADLLDGRQYIDIEGWTDERDELTTLRVPISNGTKA >Mature_120_residues MKGMNAATGRAIGGTDHLAQSIARILSTPLGTCIQRRTFGSELPELVDAPNNGATRIRLYAATVTALMRWEPRLTVTRVQ LVAAGADLLDGRQYIDIEGWTDERDELTTLRVPISNGTKA
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13021; Mature: 13021
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMNAATGRAIGGTDHLAQSIARILSTPLGTCIQRRTFGSELPELVDAPNNGATRIRLY CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEH AATVTALMRWEPRLTVTRVQLVAAGADLLDGRQYIDIEGWTDERDELTTLRVPISNGTKA HHHHHHHHHCCCCCCHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MKGMNAATGRAIGGTDHLAQSIARILSTPLGTCIQRRTFGSELPELVDAPNNGATRIRLY CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEH AATVTALMRWEPRLTVTRVQLVAAGADLLDGRQYIDIEGWTDERDELTTLRVPISNGTKA HHHHHHHHHCCCCCCHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA