| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025807
Identifier: 238025807
GI number: 238025807
Start: 142072
End: 142977
Strand: Reverse
Name: 238025807
Synonym: bglu_1g01320
Alternate gene names: NA
Gene position: 142977-142072 (Counterclockwise)
Preceding gene: 238025808
Following gene: 339905955
Centisome position: 3.66
GC content: 66.89
Gene sequence:
>906_bases ATGAGAACCACCCCGATTGACCTGTCCCAGCTGCCGGCGCCGAGCATCGTCGATGCGATCGACTTTGAGACGCTGTACGC GCAGCGTCGCGCCAGTCTGCTGGCTCTTTACCCGGCCGACCAACAGGCCGAAATCGCCGCAACCCTCGCGCTCGAATCCG AACCGCTGGCCCGGTTGATGCAGGAAAGCGCGTACCGCGAAATGCTGCTGCGCCAGCTCGTCAACGACAAGGCACGCGGC GTGCTGCTCGCCTACGCGAGCGGCAGCACGCTGGACCACATCGCCGCCCTGTTCGACGTTGACCGCCTGCTGATCTCGGC CGCTGACCCGGAAAACAACATCGCGGCGGTATATGAAGACGACGACAGCCTGCGCGAGCGCGTGCAGCTGGCGCCGCGTG GCTTCTCCGTCGCCGGCCCGGAGGAAGCCTACGAATTTCACGCGCGCTCAGCGGATGGCCGCGTTCTATCGGCCTCGGCG AAAAGCCCCGAGCCCTGCGTGATGGTTGTGTCGGTTCTGTCGCGCGACGGCGACGGCACCGCCGATGCCGCGCTGCTCGC CACCGTGCGGGCCGCCCTCGAAGGCAAGCGCCCTCTGTCCGACGAAGTGATCGTGCAATCGGCGGAAGTCGTGCCTTACA CGATCCGGGCAACGCTGCGCTTCTTCTCTGGCCCCGACCGGTCGGTCGCGCTCGCGGAAGCGAAGAAGCGCACCGCGCAG TTCGCGAACGACATGCACCGCATCGGCATGGAAGTGACCGTCGACGGCCTGTTCGCCGCGATGCGTGTGCCAGGCGTGCA AAAGGTGCTGATGGATTCGCCGGCCGGCGGCGTCCCGATCACGGGAGCACAGGCGCCGTTCTGCACCGGTATCGAGCTGG TCGACGGGGGCGTGGCCGATGAATAG
Upstream 100 bases:
>100_bases ATCTGCTCGACGGGCGCCAGTACATCGACATCGAAGGATGGACCGACGAGCGCGACGAGCTGACCACGCTGCGCGTGCCG ATCTCGAATGGAACCAAGGC
Downstream 100 bases:
>100_bases CCTGCTGCCTCCTAGCGCCACCGTGTTGGAGCGCCGGATTGCCGAGGCAAGCGCACCGGCCACCGCGGTCCCGGTCACGC TCGACACGCTCATGGACCCC
Product: bacteriophage baseplate assembly protein J
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRTTPIDLSQLPAPSIVDAIDFETLYAQRRASLLALYPADQQAEIAATLALESEPLARLMQESAYREMLLRQLVNDKARG VLLAYASGSTLDHIAALFDVDRLLISAADPENNIAAVYEDDDSLRERVQLAPRGFSVAGPEEAYEFHARSADGRVLSASA KSPEPCVMVVSVLSRDGDGTADAALLATVRAALEGKRPLSDEVIVQSAEVVPYTIRATLRFFSGPDRSVALAEAKKRTAQ FANDMHRIGMEVTVDGLFAAMRVPGVQKVLMDSPAGGVPITGAQAPFCTGIELVDGGVADE
Sequences:
>Translated_301_residues MRTTPIDLSQLPAPSIVDAIDFETLYAQRRASLLALYPADQQAEIAATLALESEPLARLMQESAYREMLLRQLVNDKARG VLLAYASGSTLDHIAALFDVDRLLISAADPENNIAAVYEDDDSLRERVQLAPRGFSVAGPEEAYEFHARSADGRVLSASA KSPEPCVMVVSVLSRDGDGTADAALLATVRAALEGKRPLSDEVIVQSAEVVPYTIRATLRFFSGPDRSVALAEAKKRTAQ FANDMHRIGMEVTVDGLFAAMRVPGVQKVLMDSPAGGVPITGAQAPFCTGIELVDGGVADE >Mature_301_residues MRTTPIDLSQLPAPSIVDAIDFETLYAQRRASLLALYPADQQAEIAATLALESEPLARLMQESAYREMLLRQLVNDKARG VLLAYASGSTLDHIAALFDVDRLLISAADPENNIAAVYEDDDSLRERVQLAPRGFSVAGPEEAYEFHARSADGRVLSASA KSPEPCVMVVSVLSRDGDGTADAALLATVRAALEGKRPLSDEVIVQSAEVVPYTIRATLRFFSGPDRSVALAEAKKRTAQ FANDMHRIGMEVTVDGLFAAMRVPGVQKVLMDSPAGGVPITGAQAPFCTGIELVDGGVADE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32171; Mature: 32171
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTPIDLSQLPAPSIVDAIDFETLYAQRRASLLALYPADQQAEIAATLALESEPLARLM CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHEEEEECCHHHHHHH QESAYREMLLRQLVNDKARGVLLAYASGSTLDHIAALFDVDRLLISAADPENNIAAVYED HHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC DDSLRERVQLAPRGFSVAGPEEAYEFHARSADGRVLSASAKSPEPCVMVVSVLSRDGDGT CHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCC ADAALLATVRAALEGKRPLSDEVIVQSAEVVPYTIRATLRFFSGPDRSVALAEAKKRTAQ HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEHEEHHHHHCCCCCCCHHHHHHHHHHH FANDMHRIGMEVTVDGLFAAMRVPGVQKVLMDSPAGGVPITGAQAPFCTGIELVDGGVAD HHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC E C >Mature Secondary Structure MRTTPIDLSQLPAPSIVDAIDFETLYAQRRASLLALYPADQQAEIAATLALESEPLARLM CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHEEEEECCHHHHHHH QESAYREMLLRQLVNDKARGVLLAYASGSTLDHIAALFDVDRLLISAADPENNIAAVYED HHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC DDSLRERVQLAPRGFSVAGPEEAYEFHARSADGRVLSASAKSPEPCVMVVSVLSRDGDGT CHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCC ADAALLATVRAALEGKRPLSDEVIVQSAEVVPYTIRATLRFFSGPDRSVALAEAKKRTAQ HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEHEEHHHHHCCCCCCCHHHHHHHHHHH FANDMHRIGMEVTVDGLFAAMRVPGVQKVLMDSPAGGVPITGAQAPFCTGIELVDGGVAD HHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA