Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025798

Identifier: 238025798

GI number: 238025798

Start: 132337

End: 132786

Strand: Reverse

Name: 238025798

Synonym: bglu_1g01230

Alternate gene names: NA

Gene position: 132786-132337 (Counterclockwise)

Preceding gene: 238025799

Following gene: 238025797

Centisome position: 3.4

GC content: 65.33

Gene sequence:

>450_bases
ATGCTCATGTCACTCGACCAGTTCGTTTTCAGCCTCACCTCGGCGCCCTTCCACGAGCTGTCGCGGCGCCGAGACTGGAA
GCACGCCCGGAAGTCGCGGGTCGGCGCCAGGGATTCGCGCCAGTTCGCCGGCGAAGGCGAGGACACGATCACGTTAACGG
GCATGGTTGCGCCTGGCGTGATCGGCGATGCCGCATCGATCGACGCCCTGGCCGCGATGGCCGATCACGGCGATGCTTAC
GTGCTCGTCGACGGCGCAGGCCACGCGTATGGCGCCTACGTGATAACCGGACTTGAGGAGCGGCAGTGCTACCACACTGC
CGAAGGGATCCCGCGTCGCATCGACTTCACGCTCACCATCGAGCGCGTCGACGATGAGGTGCTACGGCAAACGCCGGACG
CGCCGTATGACGATCCCGACAACGACGATACCGACGACCAGGAGGCGTGA

Upstream 100 bases:

>100_bases
CAAGCGATTGCGCGCGCCGTGGCCGCCGAGCTGGACAAGCGCGACCGTGCGCAGCGCGCTCGCACCAGCGCACGTCTCTC
GGATTGAACAGGAACCGCTC

Downstream 100 bases:

>100_bases
TGCCGGCGAATTCCAACAGCCGCACCCCTGATGAACGCCGGCGCATGGCGCGTGTCGAGCGCGAACCCGATTACCGGATC
ACGATCGCCGGCCGCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Tail Fiber Protein; Phage-Related Protein; Phage Protein U; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Phage Tail Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Fels-2 Prophage Protein; Bacteriophage P2 Tail Protein GPU; Tail Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLMSLDQFVFSLTSAPFHELSRRRDWKHARKSRVGARDSRQFAGEGEDTITLTGMVAPGVIGDAASIDALAAMADHGDAY
VLVDGAGHAYGAYVITGLEERQCYHTAEGIPRRIDFTLTIERVDDEVLRQTPDAPYDDPDNDDTDDQEA

Sequences:

>Translated_149_residues
MLMSLDQFVFSLTSAPFHELSRRRDWKHARKSRVGARDSRQFAGEGEDTITLTGMVAPGVIGDAASIDALAAMADHGDAY
VLVDGAGHAYGAYVITGLEERQCYHTAEGIPRRIDFTLTIERVDDEVLRQTPDAPYDDPDNDDTDDQEA
>Mature_149_residues
MLMSLDQFVFSLTSAPFHELSRRRDWKHARKSRVGARDSRQFAGEGEDTITLTGMVAPGVIGDAASIDALAAMADHGDAY
VLVDGAGHAYGAYVITGLEERQCYHTAEGIPRRIDFTLTIERVDDEVLRQTPDAPYDDPDNDDTDDQEA

Specific function: Unknown

COG id: COG3499

COG function: function code R; Phage protein U

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16402; Mature: 16402

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMSLDQFVFSLTSAPFHELSRRRDWKHARKSRVGARDSRQFAGEGEDTITLTGMVAPGV
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
IGDAASIDALAAMADHGDAYVLVDGAGHAYGAYVITGLEERQCYHTAEGIPRRIDFTLTI
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEE
ERVDDEVLRQTPDAPYDDPDNDDTDDQEA
ECCCHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLMSLDQFVFSLTSAPFHELSRRRDWKHARKSRVGARDSRQFAGEGEDTITLTGMVAPGV
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
IGDAASIDALAAMADHGDAYVLVDGAGHAYGAYVITGLEERQCYHTAEGIPRRIDFTLTI
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEE
ERVDDEVLRQTPDAPYDDPDNDDTDDQEA
ECCCHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA