| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025776
Identifier: 238025776
GI number: 238025776
Start: 110956
End: 112074
Strand: Reverse
Name: 238025776
Synonym: bglu_1g01000
Alternate gene names: NA
Gene position: 112074-110956 (Counterclockwise)
Preceding gene: 238025777
Following gene: 238025775
Centisome position: 2.87
GC content: 71.4
Gene sequence:
>1119_bases ATGGTGCGTAAGGTGTTTTCGGACAGAGCGCGCGCGCGCGGGCGAACCTGGCGCGCGCTCGCGCCAGCGCTCGCGGCCTG CCTCGCGCTGGCAGCCGCGGCGCAGGCGCGCGCGGCGATGAACTTTTGCGCGGCGCCCGCGCTGCAGAGCAACGAGGTGA CCTCGGCCGAGCCGGGCGTGCAGGCGCTGGTGCGCAGCGTCGAGGCGCGCGTCAACGAGCAGCCGAAGGCGCTCGCCCAC CTCCATACCGAGGGCCTGCTGCCGCACGAGGGCATTCGCGACGCGAGCGAGGCCGCGCTCAACGACATGGAGCTGATGCG CGACGCGGCGCTTGCCTGGCGCGTGACCAACGACGCGCGCTATCTCGCGCTCGTGAACCGCTTCCTGCTGGCGTGGACGA CCACCTACCAGCCCGATTTCAACCCGATCGACGAGACCCGCTTCGAAAGCCTGATCGTGGCCTACGACATGACCGCGAGC ACGCTGCCGGTGAAGACGCGCAACGCCGCCGCCGCGTTCATCGACAAGCTCGGGGCCGGCTACGTCGCGCAGATCGAGGC GCAGAAGCGCCCGCTCACGGGCACCTGGCGCAACAACTGGCAGAGCCACCGGATCAAGCTGATCGCGCTGGCCGCCTTCA CGCTCGGCGACCGCAAGATGATGAACGCCGCGCAGCGCCTGTTCGTCGAGCACCTGGCCGACAACATCGCCCCCGACGGC ACCACGCTCGACTTCACCGAGCGCGACGCCGTGCATTACGCCGTCTACGACCTGCAGCCGCTCGTGACGGCCGCGCTCGC CGCGCGGCGCTTCAACCGCAACTGGCTGCGCGAGCGCGGCGCCAACGGCGCGACGCTCGAGGCCGCGCTCGACTGGCTGG TGCCATATGCACGCGGCGAGAAGACCCACGAGGAGTTCGTGAACTCCACGGTGGGGTTCGACGCGAAGCGCCGCGAGGCC GGCCTGCCCGGCTACTCGGGGCCATGGTCGCCGAAGAACGCCACCGAACTGTTCTACCTGGCGGCCCGCCTGGACGGCCG CTACACCCGCGTCGCGCAGCTGCTCGCGCCGCAGCCGCCCGCCTGGGTGGCCGCGTGCCTGCCGCTGCCGGCCCGTTAA
Upstream 100 bases:
>100_bases CGACTACGCCTGAGTCCTGCGCGCCAGGCGGCGCGTTCGCGTTCGCTTCCAAGTCCGGATAACATCACACACCGCCATTC AGCCAATCGAGGAGTTCCGC
Downstream 100 bases:
>100_bases CCCCGCATCCCCCGAATCACAGGAAACCCCATGGCAGTCAGCGTGTTCGATCTTTTCAAAATCGGGATTGGCCCGTCCAG CTCGCACACGGTGGGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MVRKVFSDRARARGRTWRALAPALAACLALAAAAQARAAMNFCAAPALQSNEVTSAEPGVQALVRSVEARVNEQPKALAH LHTEGLLPHEGIRDASEAALNDMELMRDAALAWRVTNDARYLALVNRFLLAWTTTYQPDFNPIDETRFESLIVAYDMTAS TLPVKTRNAAAAFIDKLGAGYVAQIEAQKRPLTGTWRNNWQSHRIKLIALAAFTLGDRKMMNAAQRLFVEHLADNIAPDG TTLDFTERDAVHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLEAALDWLVPYARGEKTHEEFVNSTVGFDAKRREA GLPGYSGPWSPKNATELFYLAARLDGRYTRVAQLLAPQPPAWVAACLPLPAR
Sequences:
>Translated_372_residues MVRKVFSDRARARGRTWRALAPALAACLALAAAAQARAAMNFCAAPALQSNEVTSAEPGVQALVRSVEARVNEQPKALAH LHTEGLLPHEGIRDASEAALNDMELMRDAALAWRVTNDARYLALVNRFLLAWTTTYQPDFNPIDETRFESLIVAYDMTAS TLPVKTRNAAAAFIDKLGAGYVAQIEAQKRPLTGTWRNNWQSHRIKLIALAAFTLGDRKMMNAAQRLFVEHLADNIAPDG TTLDFTERDAVHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLEAALDWLVPYARGEKTHEEFVNSTVGFDAKRREA GLPGYSGPWSPKNATELFYLAARLDGRYTRVAQLLAPQPPAWVAACLPLPAR >Mature_372_residues MVRKVFSDRARARGRTWRALAPALAACLALAAAAQARAAMNFCAAPALQSNEVTSAEPGVQALVRSVEARVNEQPKALAH LHTEGLLPHEGIRDASEAALNDMELMRDAALAWRVTNDARYLALVNRFLLAWTTTYQPDFNPIDETRFESLIVAYDMTAS TLPVKTRNAAAAFIDKLGAGYVAQIEAQKRPLTGTWRNNWQSHRIKLIALAAFTLGDRKMMNAAQRLFVEHLADNIAPDG TTLDFTERDAVHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLEAALDWLVPYARGEKTHEEFVNSTVGFDAKRREA GLPGYSGPWSPKNATELFYLAARLDGRYTRVAQLLAPQPPAWVAACLPLPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41061; Mature: 41061
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRKVFSDRARARGRTWRALAPALAACLALAAAAQARAAMNFCAAPALQSNEVTSAEPGV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH QALVRSVEARVNEQPKALAHLHTEGLLPHEGIRDASEAALNDMELMRDAALAWRVTNDAR HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHH YLALVNRFLLAWTTTYQPDFNPIDETRFESLIVAYDMTASTLPVKTRNAAAAFIDKLGAG HHHHHHHHHHHHEECCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCC YVAQIEAQKRPLTGTWRNNWQSHRIKLIALAAFTLGDRKMMNAAQRLFVEHLADNIAPDG EEEEEECCCCCCCCCHHCCCCHHHEEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCCC TTLDFTERDAVHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLEAALDWLVPYARGE CEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC KTHEEFVNSTVGFDAKRREAGLPGYSGPWSPKNATELFYLAARLDGRYTRVAQLLAPQPP HHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC AWVAACLPLPAR HHHHHCCCCCCC >Mature Secondary Structure MVRKVFSDRARARGRTWRALAPALAACLALAAAAQARAAMNFCAAPALQSNEVTSAEPGV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH QALVRSVEARVNEQPKALAHLHTEGLLPHEGIRDASEAALNDMELMRDAALAWRVTNDAR HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHH YLALVNRFLLAWTTTYQPDFNPIDETRFESLIVAYDMTASTLPVKTRNAAAAFIDKLGAG HHHHHHHHHHHHEECCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCC YVAQIEAQKRPLTGTWRNNWQSHRIKLIALAAFTLGDRKMMNAAQRLFVEHLADNIAPDG EEEEEECCCCCCCCCHHCCCCHHHEEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCCC TTLDFTERDAVHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLEAALDWLVPYARGE CEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC KTHEEFVNSTVGFDAKRREAGLPGYSGPWSPKNATELFYLAARLDGRYTRVAQLLAPQPP HHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC AWVAACLPLPAR HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA