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The map label for this gene is fliN [H]

Identifier: 238025699

GI number: 238025699

Start: 21340

End: 21774

Strand: Reverse

Name: fliN [H]

Synonym: bglu_1g00210

Alternate gene names: 238025699

Gene position: 21774-21340 (Counterclockwise)

Preceding gene: 238025700

Following gene: 238025698

Centisome position: 0.56

GC content: 66.67

Gene sequence:

>435_bases
ATGACTGAGCTGAACCCGACGCCCGAAGGCAAGCAAGCCGGCCCCGGTGAGGAGTCGTCGCTGGACGATTGGGCCGCCGC
GCTCGCCGAGCAGAACGACCAGCCGATCGCCTCCGGCGCGGGTGGCGCGGGCGTGTTCCAGCCGCTGTCGAAGGCGGCCT
CGAACGCGACCCACAACGACATCGACATGATTCTCGACATTCCCGTCAAGATGACCGTCGAACTGGGCCGCACCAAGATC
GCGATCCGCAACCTGCTGCAGCTCGCGCAGGGCTCGGTGGTGGAGCTCGACGGCCTGGCCGGCGAGCCGATGGACGTGCT
CGTGAACGGCTGCCTGATCGCGCAGGGCGAAGTGGTGGTGGTGAACGACAAGTTCGGCATCCGCCTGACCGACATCATCA
CGCCGTCCGAGCGGATCCGGAAGCTGAACCGATGA

Upstream 100 bases:

>100_bases
GTGCCGGTGATGGAATGCGGCTACGGGATTTTCAATGGGCAATATGCGCTGCGGGTGAACCGGATGATCAGCGCGAGCGA
TACGATGAAGGAAGGTGGAT

Downstream 100 bases:

>100_bases
GCGACGCCGTGCGTCGCGCCGCATCGGCGCGCGTGTCACGCCCGTCGGGCAGATCGCGCCCGGCCGCCGCGACGACCGCG
CTCGCCGCGGCGGGCCTCGT

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTELNPTPEGKQAGPGEESSLDDWAAALAEQNDQPIASGAGGAGVFQPLSKAASNATHNDIDMILDIPVKMTVELGRTKI
AIRNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGIRLTDIITPSERIRKLNR

Sequences:

>Translated_144_residues
MTELNPTPEGKQAGPGEESSLDDWAAALAEQNDQPIASGAGGAGVFQPLSKAASNATHNDIDMILDIPVKMTVELGRTKI
AIRNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGIRLTDIITPSERIRKLNR
>Mature_143_residues
TELNPTPEGKQAGPGEESSLDDWAAALAEQNDQPIASGAGGAGVFQPLSKAASNATHNDIDMILDIPVKMTVELGRTKIA
IRNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGIRLTDIITPSERIRKLNR

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=126, Percent_Identity=60.3174603174603, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 15214; Mature: 15082

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELNPTPEGKQAGPGEESSLDDWAAALAEQNDQPIASGAGGAGVFQPLSKAASNATHND
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
IDMILDIPVKMTVELGRTKIAIRNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVV
CEEEEECCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCEEECCCCEEE
VNDKFGIRLTDIITPSERIRKLNR
EECCCCEEEEEEECCHHHHHHCCC
>Mature Secondary Structure 
TELNPTPEGKQAGPGEESSLDDWAAALAEQNDQPIASGAGGAGVFQPLSKAASNATHND
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
IDMILDIPVKMTVELGRTKIAIRNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVV
CEEEEECCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCEEECCCCEEE
VNDKFGIRLTDIITPSERIRKLNR
EECCCCEEEEEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2651416; 9097040; 9278503 [H]