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The map label for this gene is glxA [H]

Identifier: 339717967

GI number: 339717967

Start: 595386

End: 596513

Strand: Reverse

Name: glxA [H]

Synonym: NA

Alternate gene names: 339717967

Gene position: 596513-595386 (Counterclockwise)

Preceding gene: 238023954

Following gene: 238023944

Centisome position: 21.1

GC content: 72.52

Gene sequence:

>1128_bases
ATGACGCCCGACCTGCCCGCCTCGCTGCTGTCCGCCGATGCCGCCCCCACCCGGCTGCGCTTCGGCATCGTGCTGTTGCC
GAATTTCACGCTCACCGCGTTTTCCGGTTTCGTCGACATGCTGCGGCTGTCGGCCGACGACGGCGACCACAGCAAGCCGG
TGCGCTGCGCCTGGACCGTGATCGGCGACACGCTCGCGCCGGTGCGCGCGAGCTGCGGCATCCAGATCACGCCGTGGCAG
ACCTTCGACGAGGCCGAGCCGTTCGACTACGTGGTGGTGGTGGGCGGGCTGCTGCATTCGGGGCCGCAGGCCGGCCCCGA
GACGCTGCGCTTCATCCGCGATGCGGCGGCGGCCGGCGCGAACATGGTGGGCATCTGCACCGGCGTGTTCGCGCTGATGC
GCGCGGGCGTGCTCGACGCGCACCGGATCTGCGTGAGCTGGTTCCACTACTGGGATTTCATCGAGCGCTTCCCGAACGTC
GACCCGCAGCGGCTGATCGCCGACCGCCTGTTCGTGATCGACCGCCGCCGCATCACCTGCTCGGGCGGGCGCGCCTCGAT
CGACGTGGCCGCCGCGATCCTGCTGCGCCACTTCGATCACGCCACGGTGCAGAAGGCGCTGCGGATCCTGCTGGTGGGCG
AAATGCAGAAGGGCAACGCGCCGCAGCCGCACCCGCCGGGGCTCGAGCCCGCCACGCATCCGAAGGTCAAGCGCGCGATC
CTGCTGATGGAGCAGCATGTGGGGCGCGCGCTGCCGCTCGAGGAGCTGGCCTGCAAGCTGGATCTGTCGGCGCGCCAGCT
GGAACGGCTGTTCAAGGCCGAGACGGGCAGGAGCCCGCAGGCTTACGCCAAGCAGGTGCGGCTGCGCACCGCCGCCTGGC
TGCTGACGAGCTCGGACCGCACGGTGGCGGACATCGCGTCGAGCTGCGGCTTCGCCGATGCCTCGCACCTGGGGCGCGAG
TTCCGCAAGCAGTTCGACGCGACGCCCGCCGCGTATCGGGACAAGGGCGGGGCCGCAGCGGCGGTGCCGGGCGAGACGGC
CGAAGACGCCGGGCCGGCCCCGGACGCGGCCGGCTGCGAGGCGGGCGACGCCGCGCGCACGGCCACCGGCGCCGCCGAGG
CGCCGTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:
NA

Sequences:

>Translated_375_residues
MTPDLPASLLSADAAPTRLRFGIVLLPNFTLTAFSGFVDMLRLSADDGDHSKPVRCAWTVIGDTLAPVRASCGIQITPWQ
TFDEAEPFDYVVVVGGLLHSGPQAGPETLRFIRDAAAAGANMVGICTGVFALMRAGVLDAHRICVSWFHYWDFIERFPNV
DPQRLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAI
LLMEQHVGRALPLEELACKLDLSARQLERLFKAETGRSPQAYAKQVRLRTAAWLLTSSDRTVADIASSCGFADASHLGRE
FRKQFDATPAAYRDKGGAAAAVPGETAEDAGPAPDAAGCEAGDAARTATGAAEAP
>Mature_374_residues
TPDLPASLLSADAAPTRLRFGIVLLPNFTLTAFSGFVDMLRLSADDGDHSKPVRCAWTVIGDTLAPVRASCGIQITPWQT
FDEAEPFDYVVVVGGLLHSGPQAGPETLRFIRDAAAAGANMVGICTGVFALMRAGVLDAHRICVSWFHYWDFIERFPNVD
PQRLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAIL
LMEQHVGRALPLEELACKLDLSARQLERLFKAETGRSPQAYAKQVRLRTAAWLLTSSDRTVADIASSCGFADASHLGREF
RKQFDATPAAYRDKGGAAAAVPGETAEDAGPAPDAAGCEAGDAARTATGAAEAP

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=154, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40222; Mature: 40091

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLPASLLSADAAPTRLRFGIVLLPNFTLTAFSGFVDMLRLSADDGDHSKPVRCAWTV
CCCCCCHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
IGDTLAPVRASCGIQITPWQTFDEAEPFDYVVVVGGLLHSGPQAGPETLRFIRDAAAAGA
HHCHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCC
NMVGICTGVFALMRAGVLDAHRICVSWFHYWDFIERFPNVDPQRLIADRLFVIDRRRITC
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCEEEE
SGGRASIDVAAAILLRHFDHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LLMEQHVGRALPLEELACKLDLSARQLERLFKAETGRSPQAYAKQVRLRTAAWLLTSSDR
HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCC
TVADIASSCGFADASHLGREFRKQFDATPAAYRDKGGAAAAVPGETAEDAGPAPDAAGCE
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
AGDAARTATGAAEAP
CCCCHHHCCCCCCCC
>Mature Secondary Structure 
TPDLPASLLSADAAPTRLRFGIVLLPNFTLTAFSGFVDMLRLSADDGDHSKPVRCAWTV
CCCCCHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
IGDTLAPVRASCGIQITPWQTFDEAEPFDYVVVVGGLLHSGPQAGPETLRFIRDAAAAGA
HHCHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCC
NMVGICTGVFALMRAGVLDAHRICVSWFHYWDFIERFPNVDPQRLIADRLFVIDRRRITC
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCEEEE
SGGRASIDVAAAILLRHFDHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LLMEQHVGRALPLEELACKLDLSARQLERLFKAETGRSPQAYAKQVRLRTAAWLLTSSDR
HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCC
TVADIASSCGFADASHLGREFRKQFDATPAAYRDKGGAAAAVPGETAEDAGPAPDAAGCE
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
AGDAARTATGAAEAP
CCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]