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The map label for this gene is yxjL [H]

Identifier: 238025567

GI number: 238025567

Start: 2807953

End: 2808633

Strand: Direct

Name: yxjL [H]

Synonym: bglu_2g22640

Alternate gene names: 238025567

Gene position: 2807953-2808633 (Clockwise)

Preceding gene: 238025566

Following gene: 238025569

Centisome position: 99.31

GC content: 71.95

Gene sequence:

>681_bases
ATGACCCTTGCCTCTCCCGGCGCCAGTCCGCCGCCCCGACAGCCGGCCCAGCCCGGACCGTGCGCCCGCCTGCTGCTGGT
GGACGACCACCCGCTGGTGCGCGACGGCCTCAAGATGCGCCTCGAGGCGGTGCCCGGCTTCGTGGTGGCGGGCGAGGCCG
GCAACGCCGCCGACGCGCTCGCGCTCGCCGGGACGCTCAAGCCCGACCTCGCGCTGATGGACGTCGGCATGCAGGGCATG
AACGGCATCGCGCTCGCCGCCGCGTTCCACGAACGTTTTCCCGCGATCCGGGTGGTGATGCTGTCGATGCACGACAACGT
CGAATACGTGACGCAGGCCGTGCGCGCCGGCGCGAGCGGCTACCTGCTGAAGGATTCGCCCGCCAGCGAGATCATTCGCG
GCATCGTCGCGGTGCTGGCCGGCCAGACCTTCTTCAGCGAGGGGCTGGCGGCGCGGATGATCCAGGCGAGCGCCGGGGCG
GGGCCGCTCGAGCGGCTCACGCCGCGCGAGCGCGACATCCTCGATGCGCTCGCCGAGGGGCTCTCGAGCAAGCAGATCGC
GCTGCACAACGGGCTGTCGGTGCGCACCGTCGAGACCCACCGGCTCAACCTGAAGCGCAAGCTCGGCATCGAGGGGCAGG
CCGAGCTGATCAAGTTCGCGGTCGAGCACCGGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCGACGCGATCGGCGGCACGCTGGCGATCCGCTCGCAGCCAGGCCATACCGTCGTTTCCGTGCGCGTGCCGCTGCCCGCC
ACCCAGACAGGAGCCCGACG

Downstream 100 bases:

>100_bases
GGCCATGCGGCTGCGCCGGGGAGGCGGCCCGCCGGCACCCGGCCTGCGGCACCCGATCCTTCCCTGTACGCATCGACGGC
CGCGCTGGCGCGCGACCGGG

Product: LuxR family DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTLASPGASPPPRQPAQPGPCARLLLVDDHPLVRDGLKMRLEAVPGFVVAGEAGNAADALALAGTLKPDLALMDVGMQGM
NGIALAAAFHERFPAIRVVMLSMHDNVEYVTQAVRAGASGYLLKDSPASEIIRGIVAVLAGQTFFSEGLAARMIQASAGA
GPLERLTPRERDILDALAEGLSSKQIALHNGLSVRTVETHRLNLKRKLGIEGQAELIKFAVEHRRR

Sequences:

>Translated_226_residues
MTLASPGASPPPRQPAQPGPCARLLLVDDHPLVRDGLKMRLEAVPGFVVAGEAGNAADALALAGTLKPDLALMDVGMQGM
NGIALAAAFHERFPAIRVVMLSMHDNVEYVTQAVRAGASGYLLKDSPASEIIRGIVAVLAGQTFFSEGLAARMIQASAGA
GPLERLTPRERDILDALAEGLSSKQIALHNGLSVRTVETHRLNLKRKLGIEGQAELIKFAVEHRRR
>Mature_225_residues
TLASPGASPPPRQPAQPGPCARLLLVDDHPLVRDGLKMRLEAVPGFVVAGEAGNAADALALAGTLKPDLALMDVGMQGMN
GIALAAAFHERFPAIRVVMLSMHDNVEYVTQAVRAGASGYLLKDSPASEIIRGIVAVLAGQTFFSEGLAARMIQASAGAG
PLERLTPRERDILDALAEGLSSKQIALHNGLSVRTVETHRLNLKRKLGIEGQAELIKFAVEHRRR

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=191, Percent_Identity=38.7434554973822, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788222, Length=204, Percent_Identity=31.8627450980392, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1787473, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790102, Length=191, Percent_Identity=33.5078534031414, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786747, Length=199, Percent_Identity=28.643216080402, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788546, Length=200, Percent_Identity=25, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788712, Length=200, Percent_Identity=25, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23976; Mature: 23845

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLASPGASPPPRQPAQPGPCARLLLVDDHPLVRDGLKMRLEAVPGFVVAGEAGNAADAL
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHH
ALAGTLKPDLALMDVGMQGMNGIALAAAFHERFPAIRVVMLSMHDNVEYVTQAVRAGASG
HHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHCCCCC
YLLKDSPASEIIRGIVAVLAGQTFFSEGLAARMIQASAGAGPLERLTPRERDILDALAEG
EEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHC
LSSKQIALHNGLSVRTVETHRLNLKRKLGIEGQAELIKFAVEHRRR
CCCCEEEEECCCEEEEEHHHHHCHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLASPGASPPPRQPAQPGPCARLLLVDDHPLVRDGLKMRLEAVPGFVVAGEAGNAADAL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHH
ALAGTLKPDLALMDVGMQGMNGIALAAAFHERFPAIRVVMLSMHDNVEYVTQAVRAGASG
HHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHCCCCC
YLLKDSPASEIIRGIVAVLAGQTFFSEGLAARMIQASAGAGPLERLTPRERDILDALAEG
EEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHC
LSSKQIALHNGLSVRTVETHRLNLKRKLGIEGQAELIKFAVEHRRR
CCCCEEEEECCCEEEEEHHHHHCHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]