| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025569
Identifier: 238025569
GI number: 238025569
Start: 2809791
End: 2812421
Strand: Direct
Name: 238025569
Synonym: bglu_2g22660
Alternate gene names: NA
Gene position: 2809791-2812421 (Clockwise)
Preceding gene: 238025567
Following gene: 238025570
Centisome position: 99.38
GC content: 70.92
Gene sequence:
>2631_bases ATGTTGAGAACCCTATTCGTCCGACTCGTTGCCTGGTCCGTGCGGCGCCCGCTGCTGGTCGTCGTCCTGTCGCTCGTGAT CGCCGCGCTCGGCGGCGTCTATGCCGTCCAGCACTTCAGGATCAACACCGACGTCAGCAAGCTGCTCGACAACGAGCCGC AATGGGCCGCGCTCGGCGACGCGATCGACCAGGCGTTCCCGCAGCGCAGCCAGACGATCCTCGCGGTGGTGGAGGCGCCG GCGCCCGAATTCGCCTCGGCGGCGGCCGACGCGCTCGCCGCGGCGCTCGACCGCGACACGCGCGCCGGCCGCATCGGCCA GGTCTCGCTGCCGGCCGGCGGGCCGCTGTTCGAACATGACGCGCTGCTGTTCCTGTCGCCGGCCGAACTCGCCAGCACCG TCTCGAAGCTGACCAGCGCGCGCCCGCTCGTCAATACGCTGGCGAAGGACCCGAGCGTGACGGGCCTCGCCACCACGCTG TCGACCACGCTCGGTCAGCCGCTGCTGACGGGCCAGGTCACGCTGCCCGGCATGAAGACGCTGCTCGGCCGCGCGGCGGC CACCGTCGACGAGGTGCTGGCCGGCCGCCCGGCCGCGTTCTCGTGGCGCGCGCTGGTGGACGGCGACGCCGCGAAGCAGC CCGCGTTCGCGTTCGTGACCGTCGAGCCCCAGATCAACTACGGCGCGCTGAAGGCGGGCGAGCAGACCGAGCAGACGATC CGCGCCACCGCCGCCTCGCTCGGCCTCGACAAGCGCTTCGGCGCGGTGGTGCGCCTGACCGGCGAGCAGCCGCTCGCCGA CGAGGAATTCGCCTCGGTGGAGGACGGCGCGGCCATCAACGGCATCGGCACGATCGTGGTGGTGCTCGTGATCCTGTGGC TCGCGCTGCGCTCCAAGCGGATGATCGGCGCGGTGCTCGTCACGCTGGTGGTCGGCCTGATCGTGACGGCCGCGCTCGGC CTCGCGATGGTCGGCTCGCTGAACATGATCTCGGTCGCGTTCATGGTGCTGTTCGTCGGACTCGGCGTCGATTTCGCGAT CCAGTACGGCGTGAAGTACCGCGAGGAACGCTACCGCGACCCGGATCTGGACCATGCGCTGCTGGGCGCCGCGCACTCGA TGGGCGTGCCGCTGTCGCTCGCCACCGCGGCGGTGGCGGCGAGCTTCTTCTCGTTCCTGCCCACCGCCTACCGCGGCGTG TCGGAGCTGGGCCTGATCGCGGGGGTGGGCATGTTCGTCGCGCTGCTCACCACCATGACGCTGCTGCCCGCGCTGCTCAA GCTGCTGCACCCGCCCGGCGAGACCAAGGCGCCGGGCTTCCCGCGCCTCGCACCGGTGGACGACTACCTGGACCGCCACC GCAAGCCGATCCTGATCGGCACGCTGGTGGTGGTGATCGGCGCGCTGCCGCTGCTCACGCGGCTGCACTTCGACTTCAAC CCGCTGCACCTGAAGGATCCGCACAGCGAATCGATGGCCACGCTGATCGCGCTGAAGGATTCGCCCGAGGCCTCGGTCAA CGACGTGCGCATGCTCGCGCCGTCGCTGGCCGCCGCGGACGCGGCCGCCGCGCGGCTCGCGAAGCTGCCCGAGGTGGGCC GCACCACCACGCTGTCGTCGTTCCTGCCGGCCGACCAGCCGCAGAAGCTCGCCATCATCAAGACGGCCGCCGACGCCCTG CTGCCCGCGCTGACCCAGCCCGCCGCGCCGCCCGCCAGCGATGCGCAGCGCGTGGCGGCGCTCAAGCGCGCCTCGGCACT GCTCGGCTACGCCGCGGAGGACCACCCGGGGCCGGGTGCCGACGAGGCGAAGCATCTCTCGCAGTCGCTGGCCAAGCTTG CCGCGGCCGACGTGGCCACGCGCGATCGCGCCGAGAACGCGTTCTCGGCCACGCTGAAGATCGCGCTCGGCCAGCTCGCC GCGCTGCTGCAGCCCTACGAGGTCACGCGCGCGAACCTGCCGCCGCAGATGGTGCGCGACTGGGTGGCGCCGGACGGCCG CGCGCTCGTGCAGATCTCGCCCAAGGTGCCGCCCGGCGTCGATTCCGGCGACGACGTGATGCTGCGCCACTTCGCGCAGG CCGTGAAGCGCGCCGAGCCGGCCACCATCGGCGGGCCGATCTCGATCCTGCATTCGGCGAACACCATCATCCGCGCGTTC CTGCAGGCGGCCGGGCTGTCGATCCTGGCCATCACGGTGCTGCTCTGGATCACGCTGCGCCGCTTCGGCGACGTACTGCG CACGCTGATTCCGCTGCTGGTGTCGGGCATCGTCACGCTCGAGCTGTGCGTGGTGTTCGGCATGTCGCTGAACTTCGCGA ACATCATCGCGCTGCCGCTGATGCTCGGCGTGGGCGTGGCGTTCAAGGTGTATTTCGTGATGGCGTGGCGCGCCGGCCAG ACCGGCCTGCTGCAATCGAGCCTCACGCATGCGGTGCTGTTCAGCGCCGCGACCACCGCCACCGCGTTCGGCAGCCTGTG GCTGTCGCACCACCCGGGTACCGCGAGCATGGGCAAGCTACTCGCGCTGGCCCTGTCCTGTACGCTGATCGGTGCCGTAG TGTTCCAGCCCGTGCTGATGGGCAAACCGCGCGTGCCACGCGCGCCCCAATCCCCGGAAATCAATGAATAA
Upstream 100 bases:
>100_bases CCGGCCGGGCCGCGACCCGCGCGGCGGGTTGCCGCCCCGGAAACCGCCGCGCCGGTATACTTGGCCACTTTGCCCGATCG CGGGCCACGCCAGCCTGCCC
Downstream 100 bases:
>100_bases ACAGCGAATCATGGCCGGCGCCCTGAGCGCCGGCGCCCTGCTGCTCGGCGGTTGCGCGACCGGCCCCAACAAGACCGCCG GCGACCCGCTCGAGCCGATG
Product: efflux pump, RND superfamily protein
Products: NA
Alternate protein names: RND Superfamily Exporter; Acriflavin Resistance Plasma Membrane Protein; SecD/SecF Family Protein Export Membrane Protein; RND Efflux Transporter; Exporter Of RND Superfamily Protein-Like Protein; Efflux Pump RND Superfamily Protein; RND Family Efflux Pump; Exporter Of RND Superfamily; Protein Export Membrane Protein; Transporter Exporter RND Family
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MLRTLFVRLVAWSVRRPLLVVVLSLVIAALGGVYAVQHFRINTDVSKLLDNEPQWAALGDAIDQAFPQRSQTILAVVEAP APEFASAAADALAAALDRDTRAGRIGQVSLPAGGPLFEHDALLFLSPAELASTVSKLTSARPLVNTLAKDPSVTGLATTL STTLGQPLLTGQVTLPGMKTLLGRAAATVDEVLAGRPAAFSWRALVDGDAAKQPAFAFVTVEPQINYGALKAGEQTEQTI RATAASLGLDKRFGAVVRLTGEQPLADEEFASVEDGAAINGIGTIVVVLVILWLALRSKRMIGAVLVTLVVGLIVTAALG LAMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERYRDPDLDHALLGAAHSMGVPLSLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALLTTMTLLPALLKLLHPPGETKAPGFPRLAPVDDYLDRHRKPILIGTLVVVIGALPLLTRLHFDFN PLHLKDPHSESMATLIALKDSPEASVNDVRMLAPSLAAADAAAARLAKLPEVGRTTTLSSFLPADQPQKLAIIKTAADAL LPALTQPAAPPASDAQRVAALKRASALLGYAAEDHPGPGADEAKHLSQSLAKLAAADVATRDRAENAFSATLKIALGQLA ALLQPYEVTRANLPPQMVRDWVAPDGRALVQISPKVPPGVDSGDDVMLRHFAQAVKRAEPATIGGPISILHSANTIIRAF LQAAGLSILAITVLLWITLRRFGDVLRTLIPLLVSGIVTLELCVVFGMSLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGKLLALALSCTLIGAVVFQPVLMGKPRVPRAPQSPEINE
Sequences:
>Translated_876_residues MLRTLFVRLVAWSVRRPLLVVVLSLVIAALGGVYAVQHFRINTDVSKLLDNEPQWAALGDAIDQAFPQRSQTILAVVEAP APEFASAAADALAAALDRDTRAGRIGQVSLPAGGPLFEHDALLFLSPAELASTVSKLTSARPLVNTLAKDPSVTGLATTL STTLGQPLLTGQVTLPGMKTLLGRAAATVDEVLAGRPAAFSWRALVDGDAAKQPAFAFVTVEPQINYGALKAGEQTEQTI RATAASLGLDKRFGAVVRLTGEQPLADEEFASVEDGAAINGIGTIVVVLVILWLALRSKRMIGAVLVTLVVGLIVTAALG LAMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERYRDPDLDHALLGAAHSMGVPLSLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALLTTMTLLPALLKLLHPPGETKAPGFPRLAPVDDYLDRHRKPILIGTLVVVIGALPLLTRLHFDFN PLHLKDPHSESMATLIALKDSPEASVNDVRMLAPSLAAADAAAARLAKLPEVGRTTTLSSFLPADQPQKLAIIKTAADAL LPALTQPAAPPASDAQRVAALKRASALLGYAAEDHPGPGADEAKHLSQSLAKLAAADVATRDRAENAFSATLKIALGQLA ALLQPYEVTRANLPPQMVRDWVAPDGRALVQISPKVPPGVDSGDDVMLRHFAQAVKRAEPATIGGPISILHSANTIIRAF LQAAGLSILAITVLLWITLRRFGDVLRTLIPLLVSGIVTLELCVVFGMSLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGKLLALALSCTLIGAVVFQPVLMGKPRVPRAPQSPEINE >Mature_876_residues MLRTLFVRLVAWSVRRPLLVVVLSLVIAALGGVYAVQHFRINTDVSKLLDNEPQWAALGDAIDQAFPQRSQTILAVVEAP APEFASAAADALAAALDRDTRAGRIGQVSLPAGGPLFEHDALLFLSPAELASTVSKLTSARPLVNTLAKDPSVTGLATTL STTLGQPLLTGQVTLPGMKTLLGRAAATVDEVLAGRPAAFSWRALVDGDAAKQPAFAFVTVEPQINYGALKAGEQTEQTI RATAASLGLDKRFGAVVRLTGEQPLADEEFASVEDGAAINGIGTIVVVLVILWLALRSKRMIGAVLVTLVVGLIVTAALG LAMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERYRDPDLDHALLGAAHSMGVPLSLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALLTTMTLLPALLKLLHPPGETKAPGFPRLAPVDDYLDRHRKPILIGTLVVVIGALPLLTRLHFDFN PLHLKDPHSESMATLIALKDSPEASVNDVRMLAPSLAAADAAAARLAKLPEVGRTTTLSSFLPADQPQKLAIIKTAADAL LPALTQPAAPPASDAQRVAALKRASALLGYAAEDHPGPGADEAKHLSQSLAKLAAADVATRDRAENAFSATLKIALGQLA ALLQPYEVTRANLPPQMVRDWVAPDGRALVQISPKVPPGVDSGDDVMLRHFAQAVKRAEPATIGGPISILHSANTIIRAF LQAAGLSILAITVLLWITLRRFGDVLRTLIPLLVSGIVTLELCVVFGMSLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGKLLALALSCTLIGAVVFQPVLMGKPRVPRAPQSPEINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92105; Mature: 92105
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTLFVRLVAWSVRRPLLVVVLSLVIAALGGVYAVQHFRINTDVSKLLDNEPQWAALGD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCHHHHHH AIDQAFPQRSQTILAVVEAPAPEFASAAADALAAALDRDTRAGRIGQVSLPAGGPLFEHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC ALLFLSPAELASTVSKLTSARPLVNTLAKDPSVTGLATTLSTTLGQPLLTGQVTLPGMKT CEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCEECCHHHH LLGRAAATVDEVLAGRPAAFSWRALVDGDAAKQPAFAFVTVEPQINYGALKAGEQTEQTI HHHHHHHHHHHHHCCCCCCEEEHEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH RATAASLGLDKRFGAVVRLTGEQPLADEEFASVEDGAAINGIGTIVVVLVILWLALRSKR HHHHHHHCCHHHCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MIGAVLVTLVVGLIVTAALGLAMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERYRD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCC PDLDHALLGAAHSMGVPLSLATAAVAASFFSFLPTAYRGVSELGLIAGVGMFVALLTTMT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPALLKLLHPPGETKAPGFPRLAPVDDYLDRHRKPILIGTLVVVIGALPLLTRLHFDFN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC PLHLKDPHSESMATLIALKDSPEASVNDVRMLAPSLAAADAAAARLAKLPEVGRTTTLSS CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FLPADQPQKLAIIKTAADALLPALTQPAAPPASDAQRVAALKRASALLGYAAEDHPGPGA HCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEAKHLSQSLAKLAAADVATRDRAENAFSATLKIALGQLAALLQPYEVTRANLPPQMVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHH WVAPDGRALVQISPKVPPGVDSGDDVMLRHFAQAVKRAEPATIGGPISILHSANTIIRAF HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LQAAGLSILAITVLLWITLRRFGDVLRTLIPLLVSGIVTLELCVVFGMSLNFANIIALPL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MLGVGVAFKVYFVMAWRAGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGKL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LALALSCTLIGAVVFQPVLMGKPRVPRAPQSPEINE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRTLFVRLVAWSVRRPLLVVVLSLVIAALGGVYAVQHFRINTDVSKLLDNEPQWAALGD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCHHHHHH AIDQAFPQRSQTILAVVEAPAPEFASAAADALAAALDRDTRAGRIGQVSLPAGGPLFEHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC ALLFLSPAELASTVSKLTSARPLVNTLAKDPSVTGLATTLSTTLGQPLLTGQVTLPGMKT CEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCEECCHHHH LLGRAAATVDEVLAGRPAAFSWRALVDGDAAKQPAFAFVTVEPQINYGALKAGEQTEQTI HHHHHHHHHHHHHCCCCCCEEEHEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH RATAASLGLDKRFGAVVRLTGEQPLADEEFASVEDGAAINGIGTIVVVLVILWLALRSKR HHHHHHHCCHHHCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MIGAVLVTLVVGLIVTAALGLAMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERYRD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCC PDLDHALLGAAHSMGVPLSLATAAVAASFFSFLPTAYRGVSELGLIAGVGMFVALLTTMT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPALLKLLHPPGETKAPGFPRLAPVDDYLDRHRKPILIGTLVVVIGALPLLTRLHFDFN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC PLHLKDPHSESMATLIALKDSPEASVNDVRMLAPSLAAADAAAARLAKLPEVGRTTTLSS CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FLPADQPQKLAIIKTAADALLPALTQPAAPPASDAQRVAALKRASALLGYAAEDHPGPGA HCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEAKHLSQSLAKLAAADVATRDRAENAFSATLKIALGQLAALLQPYEVTRANLPPQMVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHH WVAPDGRALVQISPKVPPGVDSGDDVMLRHFAQAVKRAEPATIGGPISILHSANTIIRAF HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LQAAGLSILAITVLLWITLRRFGDVLRTLIPLLVSGIVTLELCVVFGMSLNFANIIALPL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MLGVGVAFKVYFVMAWRAGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGKL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LALALSCTLIGAVVFQPVLMGKPRVPRAPQSPEINE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA