| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025552
Identifier: 238025552
GI number: 238025552
Start: 2790961
End: 2792154
Strand: Reverse
Name: 238025552
Synonym: bglu_2g22490
Alternate gene names: NA
Gene position: 2792154-2790961 (Counterclockwise)
Preceding gene: 238025553
Following gene: 238025551
Centisome position: 98.76
GC content: 72.45
Gene sequence:
>1194_bases ATGATCGACCAACGGATGACGCGCGCCGCGCTCGCGGCCGCGCTGGGGATGTTTTTTGCCTGCGCCGCGCCGCTCGCGAG CGCGGCCGACACGCTGCGGCCCGAGGTGGCCAAGCCGCTCGCGGCCGCGCAGGAGCTTTATCGCGCGCACAAGTATCGCG ATGCGCTCGGCAAGATCGCGCTTGCGCAGGCCGTGCCGAACAAGACCCCCTACGAGGCGGTGACGGTGGACGAAATGCGC GGCGCCGCGGCGATCGCGGCTGGCGATGCGGGCGCCGCCGAACAGGCCTACGAGGCCGTGCTGGCCTCGGGCCACGCGAG CCCCGCCGACGAGCAGCGCACGGCCGCCGCGCTGGCCGGGCTCTATTTCCAGCAGAAGAACTATCCGCTCGCGATCCGCA CCGCGCAGCGCTATCAGAAGGCGGGCGGCGGCGATCCCGAGATGCGCACGCTGCTGCTGCAGTCGTACTACCTGTCGAAC GACTGCAAGCCGGTGGTGGCCACGCTCAGGCCCGCGCTCGAGGCCGACACGCGCGCGGGCCGCGTGCCCGAGGAGGCGTC GCTGCAGATGCTGGCCACCTGCGCGCAGCGCACCGGCGACGGCGCGACCTATCGCGCCGCGCTCGAATCGCTGGTGGTCC ACCATCCGAATCCGGCCTATCAGACCCAGCTGTTCGACGCGATCCGCACGCGGCCCGGCTATCTGTCCTCGCTCGACCTC GACCTGTACCGGCTGCGGCGTGCCAGCGGCGGCCTGACGAGCGCCGCCGACTACATGGAGATGACGCAGCTCGCGATCGT GGCCGGCTCGACGGCCGAAGCCAAGCAGGTGGTGGACCAGGGTTTCGCCTCGGGCGTGCTCGGCCACGATGCCCAGGCCG AGCGCGAGAAGCGCCTGCAGGCGCTGGCCGCCAAGCGCGCGGTGGCGCCGCCCGATCCGGCCAACCCGGTCGATCCGGTA GACGCGGGGCTCAACCAGGTGTTCGCCGGCAAGGCGGCCGAAGGCCTCGCGCAGATCCGGCAGGCGATCGCCAAGGGCGG CCTCGCGCATCCGGATCTGGCGCAGCTGCGCCTCGGCGAGGCGTACTACGTCGCGGGCGACAAGCCCCGCGCGGTGCAGG CCTGGCGCGCCGTCAACGGGAACGACGGGACAGCCGACCTCGCGCGGCTGTGGACCCTCGTCGCGGCGAAATGA
Upstream 100 bases:
>100_bases GACGTGGCCGGCGTGCTGGCCGCCGCGCAGCGCGTCGGGGCGACCAAGATCGGCCTGATCGGCAACGAACAGTATATGCA GTAACGAACCGGGCACTTCG
Downstream 100 bases:
>100_bases ATCACGAACGGGACAGCGAGCGACCATGGCCTCGTTCAGCGATGAATCGACGTCGGCCGCGGCCGCGATCGGCGCGCGAA TGCGCGCGCTGCGCCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIDQRMTRAALAAALGMFFACAAPLASAADTLRPEVAKPLAAAQELYRAHKYRDALGKIALAQAVPNKTPYEAVTVDEMR GAAAIAAGDAGAAEQAYEAVLASGHASPADEQRTAAALAGLYFQQKNYPLAIRTAQRYQKAGGGDPEMRTLLLQSYYLSN DCKPVVATLRPALEADTRAGRVPEEASLQMLATCAQRTGDGATYRAALESLVVHHPNPAYQTQLFDAIRTRPGYLSSLDL DLYRLRRASGGLTSAADYMEMTQLAIVAGSTAEAKQVVDQGFASGVLGHDAQAEREKRLQALAAKRAVAPPDPANPVDPV DAGLNQVFAGKAAEGLAQIRQAIAKGGLAHPDLAQLRLGEAYYVAGDKPRAVQAWRAVNGNDGTADLARLWTLVAAK
Sequences:
>Translated_397_residues MIDQRMTRAALAAALGMFFACAAPLASAADTLRPEVAKPLAAAQELYRAHKYRDALGKIALAQAVPNKTPYEAVTVDEMR GAAAIAAGDAGAAEQAYEAVLASGHASPADEQRTAAALAGLYFQQKNYPLAIRTAQRYQKAGGGDPEMRTLLLQSYYLSN DCKPVVATLRPALEADTRAGRVPEEASLQMLATCAQRTGDGATYRAALESLVVHHPNPAYQTQLFDAIRTRPGYLSSLDL DLYRLRRASGGLTSAADYMEMTQLAIVAGSTAEAKQVVDQGFASGVLGHDAQAEREKRLQALAAKRAVAPPDPANPVDPV DAGLNQVFAGKAAEGLAQIRQAIAKGGLAHPDLAQLRLGEAYYVAGDKPRAVQAWRAVNGNDGTADLARLWTLVAAK >Mature_397_residues MIDQRMTRAALAAALGMFFACAAPLASAADTLRPEVAKPLAAAQELYRAHKYRDALGKIALAQAVPNKTPYEAVTVDEMR GAAAIAAGDAGAAEQAYEAVLASGHASPADEQRTAAALAGLYFQQKNYPLAIRTAQRYQKAGGGDPEMRTLLLQSYYLSN DCKPVVATLRPALEADTRAGRVPEEASLQMLATCAQRTGDGATYRAALESLVVHHPNPAYQTQLFDAIRTRPGYLSSLDL DLYRLRRASGGLTSAADYMEMTQLAIVAGSTAEAKQVVDQGFASGVLGHDAQAEREKRLQALAAKRAVAPPDPANPVDPV DAGLNQVFAGKAAEGLAQIRQAIAKGGLAHPDLAQLRLGEAYYVAGDKPRAVQAWRAVNGNDGTADLARLWTLVAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41963; Mature: 41963
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDQRMTRAALAAALGMFFACAAPLASAADTLRPEVAKPLAAAQELYRAHKYRDALGKIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQAVPNKTPYEAVTVDEMRGAAAIAAGDAGAAEQAYEAVLASGHASPADEQRTAAALAG HHHHCCCCCCCCEEEHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LYFQQKNYPLAIRTAQRYQKAGGGDPEMRTLLLQSYYLSNDCKPVVATLRPALEADTRAG HHHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC RVPEEASLQMLATCAQRTGDGATYRAALESLVVHHPNPAYQTQLFDAIRTRPGYLSSLDL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH DLYRLRRASGGLTSAADYMEMTQLAIVAGSTAEAKQVVDQGFASGVLGHDAQAEREKRLQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALAAKRAVAPPDPANPVDPVDAGLNQVFAGKAAEGLAQIRQAIAKGGLAHPDLAQLRLGE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC AYYVAGDKPRAVQAWRAVNGNDGTADLARLWTLVAAK EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIDQRMTRAALAAALGMFFACAAPLASAADTLRPEVAKPLAAAQELYRAHKYRDALGKIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQAVPNKTPYEAVTVDEMRGAAAIAAGDAGAAEQAYEAVLASGHASPADEQRTAAALAG HHHHCCCCCCCCEEEHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LYFQQKNYPLAIRTAQRYQKAGGGDPEMRTLLLQSYYLSNDCKPVVATLRPALEADTRAG HHHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC RVPEEASLQMLATCAQRTGDGATYRAALESLVVHHPNPAYQTQLFDAIRTRPGYLSSLDL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH DLYRLRRASGGLTSAADYMEMTQLAIVAGSTAEAKQVVDQGFASGVLGHDAQAEREKRLQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALAAKRAVAPPDPANPVDPVDAGLNQVFAGKAAEGLAQIRQAIAKGGLAHPDLAQLRLGE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC AYYVAGDKPRAVQAWRAVNGNDGTADLARLWTLVAAK EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA