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The map label for this gene is ycjC [C]

Identifier: 238025551

GI number: 238025551

Start: 2790360

End: 2790935

Strand: Reverse

Name: ycjC [C]

Synonym: bglu_2g22480

Alternate gene names: 238025551

Gene position: 2790935-2790360 (Counterclockwise)

Preceding gene: 238025552

Following gene: 238025550

Centisome position: 98.71

GC content: 72.22

Gene sequence:

>576_bases
ATGGCCTCGTTCAGCGATGAATCGACGTCGGCCGCGGCCGCGATCGGCGCGCGAATGCGCGCGCTGCGCCAGCGGCTGAA
GCTCACGCTCGACGAGGTCGCGGCGGCCGCGGGCATCTCGAAGCCGTTCCTGTCGCAGGTCGAGCGCGGCCGCGCCACGC
CGTCGCTGGCCTCGCTGGCCGGCATCGCCCGCGCGCTCGGCGTCACGATGCAGTACTTCGTCGAGGCGCCGAGCGAGGCG
AAGGCGGTCAGGCGCGCGGACACGCTGCAGTTCTTCAGCTTCGCGGATTCGGCCAACTCGTTCGCGCGCATGACCAACCC
GGGCAGCAGCCGCCAGCTCGACGCGGTACTGGTGAGGCTGCCGGCCCGCGAACCGGGCTCTCCGATGCCGTCGGACGCGG
GCGAGCAGTTCCTGTACGTGGTGCGCGGCGAGATCGCGCTGACGCTGAACGGCCGCACGCTGACGCTGAAGCCCGGCGAC
ACCGCGCACTACGAGGCGGCGCTCGCGCAGGCGTGGCGCAACGCGGCCGACGAGGAGGCGTGGGTGGTCTGGGTCGGCAC
GCCGAGACTGTTTTGA

Upstream 100 bases:

>100_bases
GCCTGGCGCGCCGTCAACGGGAACGACGGGACAGCCGACCTCGCGCGGCTGTGGACCCTCGTCGCGGCGAAATGAATCAC
GAACGGGACAGCGAGCGACC

Downstream 100 bases:

>100_bases
CATGGAAGGGAGATGCGGCCGGCAGGGGCGGGTAGCCGGAGCGTAAGACGAAATTCCGGCGCGGCTAGGACGAGCGATCG
GAACGACTCGTTTGCATGAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Cupin 2 Conserved Barrel Domain Protein; MerR Family Transcriptional Regulator; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator MerR Family; Cupin 2 Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcription Regulator; Helix-Turn-Helix Transcriptional Regulator PuuR; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Merr Family; Transcriptional Regulator XRE Family Protein; Transcriptional Regulator Cro/CI Family Protein; Helix-Turn-Helix Protein; XRE Family-Like Protein

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MASFSDESTSAAAAIGARMRALRQRLKLTLDEVAAAAGISKPFLSQVERGRATPSLASLAGIARALGVTMQYFVEAPSEA
KAVRRADTLQFFSFADSANSFARMTNPGSSRQLDAVLVRLPAREPGSPMPSDAGEQFLYVVRGEIALTLNGRTLTLKPGD
TAHYEAALAQAWRNAADEEAWVVWVGTPRLF

Sequences:

>Translated_191_residues
MASFSDESTSAAAAIGARMRALRQRLKLTLDEVAAAAGISKPFLSQVERGRATPSLASLAGIARALGVTMQYFVEAPSEA
KAVRRADTLQFFSFADSANSFARMTNPGSSRQLDAVLVRLPAREPGSPMPSDAGEQFLYVVRGEIALTLNGRTLTLKPGD
TAHYEAALAQAWRNAADEEAWVVWVGTPRLF
>Mature_190_residues
ASFSDESTSAAAAIGARMRALRQRLKLTLDEVAAAAGISKPFLSQVERGRATPSLASLAGIARALGVTMQYFVEAPSEAK
AVRRADTLQFFSFADSANSFARMTNPGSSRQLDAVLVRLPAREPGSPMPSDAGEQFLYVVRGEIALTLNGRTLTLKPGDT
AHYEAALAQAWRNAADEEAWVVWVGTPRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20487; Mature: 20356

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFSDESTSAAAAIGARMRALRQRLKLTLDEVAAAAGISKPFLSQVERGRATPSLASLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH
GIARALGVTMQYFVEAPSEAKAVRRADTLQFFSFADSANSFARMTNPGSSRQLDAVLVRL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHEEEC
PAREPGSPMPSDAGEQFLYVVRGEIALTLNGRTLTLKPGDTAHYEAALAQAWRNAADEEA
CCCCCCCCCCCCCCCCEEEEEECEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCE
WVVWVGTPRLF
EEEEECCCCCC
>Mature Secondary Structure 
ASFSDESTSAAAAIGARMRALRQRLKLTLDEVAAAAGISKPFLSQVERGRATPSLASLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH
GIARALGVTMQYFVEAPSEAKAVRRADTLQFFSFADSANSFARMTNPGSSRQLDAVLVRL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHEEEC
PAREPGSPMPSDAGEQFLYVVRGEIALTLNGRTLTLKPGDTAHYEAALAQAWRNAADEEA
CCCCCCCCCCCCCCCCEEEEEECEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCE
WVVWVGTPRLF
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA