| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025501
Identifier: 238025501
GI number: 238025501
Start: 2724567
End: 2724995
Strand: Direct
Name: 238025501
Synonym: bglu_2g21960
Alternate gene names: NA
Gene position: 2724567-2724995 (Clockwise)
Preceding gene: 238025500
Following gene: 238025504
Centisome position: 96.37
GC content: 56.18
Gene sequence:
>429_bases ATGAGCGTGATCTACGCAGCTTTTGACACACAACGGCATATCTGCGCTTTCGGGGACGATCAATCGATGCCGGAAGCACT GCCATTCATTAAAATCTCAGAGGATGAGCAAGCATGGCTCTTGGAGGGAGCCGCAAACGGCAAGGTGATGGCCGTGGATG ACAAAGAAAGGCCGATCCTGCTTGACCCGGCTCCGCCATCGCCAGATCAAATCCGTGCACGGAACACCGCGTATCGTGAT TGGCTTCTGGAGCGGGCGAGCGTTGCCCTGACACCGCTTCAGACAGCCATGCTACTTGGGAACGCAACAGAGGCAGAGAA GGCGCTGGCACGACAATGGATCGTCTATGCCCGAGCACTCAAAAAGGTTGACCTCGGTGTTGCGCTTCCTGACTGGCCTG CCGCACCGGCAATTGCTGGGTCAAATTAA
Upstream 100 bases:
>100_bases ACCATGACCCAGAATGGTGTGAAGGTTCGAGTCTCCAATGACGCTGGCGTTACGGGGCAATACTGGAAGGTTTTCTACCG GGCTATTGGAGTATAAGAAA
Downstream 100 bases:
>100_bases ACGTCAGGCTGGGTCAAATTAAACGGCGCGCTACTTGGCCTACACCAATCCGGCTACCCGGGTGTTCGCGGCCGACGGCA CGGAGCGCCATCGCGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSVIYAAFDTQRHICAFGDDQSMPEALPFIKISEDEQAWLLEGAANGKVMAVDDKERPILLDPAPPSPDQIRARNTAYRD WLLERASVALTPLQTAMLLGNATEAEKALARQWIVYARALKKVDLGVALPDWPAAPAIAGSN
Sequences:
>Translated_142_residues MSVIYAAFDTQRHICAFGDDQSMPEALPFIKISEDEQAWLLEGAANGKVMAVDDKERPILLDPAPPSPDQIRARNTAYRD WLLERASVALTPLQTAMLLGNATEAEKALARQWIVYARALKKVDLGVALPDWPAAPAIAGSN >Mature_141_residues SVIYAAFDTQRHICAFGDDQSMPEALPFIKISEDEQAWLLEGAANGKVMAVDDKERPILLDPAPPSPDQIRARNTAYRDW LLERASVALTPLQTAMLLGNATEAEKALARQWIVYARALKKVDLGVALPDWPAAPAIAGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15514; Mature: 15383
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIYAAFDTQRHICAFGDDQSMPEALPFIKISEDEQAWLLEGAANGKVMAVDDKERPIL CEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECCCCCCEE LDPAPPSPDQIRARNTAYRDWLLERASVALTPLQTAMLLGNATEAEKALARQWIVYARAL ECCCCCCHHHEHHCCHHHHHHHHHHHHEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKVDLGVALPDWPAAPAIAGSN HHHCCCEECCCCCCCCCCCCCC >Mature Secondary Structure SVIYAAFDTQRHICAFGDDQSMPEALPFIKISEDEQAWLLEGAANGKVMAVDDKERPIL EEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECCCCCCEE LDPAPPSPDQIRARNTAYRDWLLERASVALTPLQTAMLLGNATEAEKALARQWIVYARAL ECCCCCCHHHEHHCCHHHHHHHHHHHHEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKVDLGVALPDWPAAPAIAGSN HHHCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA