| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025500
Identifier: 238025500
GI number: 238025500
Start: 2723606
End: 2724562
Strand: Direct
Name: 238025500
Synonym: bglu_2g21950
Alternate gene names: NA
Gene position: 2723606-2724562 (Clockwise)
Preceding gene: 238025499
Following gene: 238025501
Centisome position: 96.33
GC content: 56.11
Gene sequence:
>957_bases ATGGACTACACAACCAGTATCGACAATGTGGTGCATGGCGGGACCGGGCACCGCATGCACAGCGACAGCATCGCGATGCC GACAGCATGGTCGGGTAATGACGGCAACATGGTGATCTGGAGTCTGATGGAGGTGCTGAGGCTGGGCGGCATCACCGGTA AGGCATTCAACCCAGACGATCCTGCGTCCTACACGCGATTTCGCGATGCGCTGGTCGCAACATTTGCGCCGTTCGATTCG CCGGCATTTAGGGGATCGCCTCAAGCGCCACTTGCCCCGCAGTTCGACAACACGACTCGGCTCGCAACGACGTCTTTTGT TCTGCGTGCACTCGGCTCTTTTTCTGGTTTCGCTGGCACCAAGGCGGATACGACCTTAACTGCGGATTTCGCCGGCTTTG CAATCCAGAGCTACGCGTCCGCATCAATCACAGTGACCTTGCCGTTAGGGGCCACGATGCCAGTCGGCAGCGCTATTACG TTCTTCAACAACGGCACGAGTGGATCGGTGATGGCCATCGCCGTTCAGGGTTTCGACACGATCACCGTTCCCGGTAATCG GGTCGTCGTTATCGCGCTTCAGCCTGGAGAGACGCTCAAATTGATGTCGCGCGGTTCTGGCGAATGGAACATTGTGGGCG GAACAGCTGCGCTGAAATTTTCCACATTGTTCAGTTCATCGCTGGCAGCTACCGGCTTTCAGAGATTGCCAACCGGGTAC ATCGAGCAATGGGGAAGTGGCGTCACAGATGCAAACGGTGAAATCAATTTCGTGTTCCCGAAGCGGTTTCCGACCGCCTG CTTCAACGTCGTCGGAAATCACGCTGGCGTCGGTGCTGCAATGATGATCGTCGTTGATGGAACCATGACCCAGAATGGTG TGAAGGTTCGAGTCTCCAATGACGCTGGCGTTACGGGGCAATACTGGAAGGTTTTCTACCGGGCTATTGGAGTATAA
Upstream 100 bases:
>100_bases AATCTGCTCCCAAGACGGTACTGAAATTGAATGCCTGCTCGCCCGGATCGCTCCGGCGCGCTTTCAAATCAACGTGATTT ATCTGTAGAGAGGCACCTGA
Downstream 100 bases:
>100_bases GAAAATGAGCGTGATCTACGCAGCTTTTGACACACAACGGCATATCTGCGCTTTCGGGGACGATCAATCGATGCCGGAAG CACTGCCATTCATTAAAATC
Product: bacteriophage tail fiber protein
Products: NA
Alternate protein names: Exported Phage Protein; Phage-Related Tail Fibre Protein-Like Protein; Phage-Related Tail Fiber Protein-Like Protein; Tail Collar Domain Protein
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MDYTTSIDNVVHGGTGHRMHSDSIAMPTAWSGNDGNMVIWSLMEVLRLGGITGKAFNPDDPASYTRFRDALVATFAPFDS PAFRGSPQAPLAPQFDNTTRLATTSFVLRALGSFSGFAGTKADTTLTADFAGFAIQSYASASITVTLPLGATMPVGSAIT FFNNGTSGSVMAIAVQGFDTITVPGNRVVVIALQPGETLKLMSRGSGEWNIVGGTAALKFSTLFSSSLAATGFQRLPTGY IEQWGSGVTDANGEINFVFPKRFPTACFNVVGNHAGVGAAMMIVVDGTMTQNGVKVRVSNDAGVTGQYWKVFYRAIGV
Sequences:
>Translated_318_residues MDYTTSIDNVVHGGTGHRMHSDSIAMPTAWSGNDGNMVIWSLMEVLRLGGITGKAFNPDDPASYTRFRDALVATFAPFDS PAFRGSPQAPLAPQFDNTTRLATTSFVLRALGSFSGFAGTKADTTLTADFAGFAIQSYASASITVTLPLGATMPVGSAIT FFNNGTSGSVMAIAVQGFDTITVPGNRVVVIALQPGETLKLMSRGSGEWNIVGGTAALKFSTLFSSSLAATGFQRLPTGY IEQWGSGVTDANGEINFVFPKRFPTACFNVVGNHAGVGAAMMIVVDGTMTQNGVKVRVSNDAGVTGQYWKVFYRAIGV >Mature_318_residues MDYTTSIDNVVHGGTGHRMHSDSIAMPTAWSGNDGNMVIWSLMEVLRLGGITGKAFNPDDPASYTRFRDALVATFAPFDS PAFRGSPQAPLAPQFDNTTRLATTSFVLRALGSFSGFAGTKADTTLTADFAGFAIQSYASASITVTLPLGATMPVGSAIT FFNNGTSGSVMAIAVQGFDTITVPGNRVVVIALQPGETLKLMSRGSGEWNIVGGTAALKFSTLFSSSLAATGFQRLPTGY IEQWGSGVTDANGEINFVFPKRFPTACFNVVGNHAGVGAAMMIVVDGTMTQNGVKVRVSNDAGVTGQYWKVFYRAIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33403; Mature: 33403
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYTTSIDNVVHGGTGHRMHSDSIAMPTAWSGNDGNMVIWSLMEVLRLGGITGKAFNPDD CCCCCCCHHHEECCCCCEECCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCC PASYTRFRDALVATFAPFDSPAFRGSPQAPLAPQFDNTTRLATTSFVLRALGSFSGFAGT CHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC KADTTLTADFAGFAIQSYASASITVTLPLGATMPVGSAITFFNNGTSGSVMAIAVQGFDT CCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCEE ITVPGNRVVVIALQPGETLKLMSRGSGEWNIVGGTAALKFSTLFSSSLAATGFQRLPTGY EEECCCEEEEEEECCCCEEEHHHCCCCCEEEEECHHHEEEHHHHHHHHHHCCHHHCCHHH IEQWGSGVTDANGEINFVFPKRFPTACFNVVGNHAGVGAAMMIVVDGTMTQNGVKVRVSN HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEECC DAGVTGQYWKVFYRAIGV CCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDYTTSIDNVVHGGTGHRMHSDSIAMPTAWSGNDGNMVIWSLMEVLRLGGITGKAFNPDD CCCCCCCHHHEECCCCCEECCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCC PASYTRFRDALVATFAPFDSPAFRGSPQAPLAPQFDNTTRLATTSFVLRALGSFSGFAGT CHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC KADTTLTADFAGFAIQSYASASITVTLPLGATMPVGSAITFFNNGTSGSVMAIAVQGFDT CCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCEE ITVPGNRVVVIALQPGETLKLMSRGSGEWNIVGGTAALKFSTLFSSSLAATGFQRLPTGY EEECCCEEEEEEECCCCEEEHHHCCCCCEEEEECHHHEEEHHHHHHHHHHCCHHHCCHHH IEQWGSGVTDANGEINFVFPKRFPTACFNVVGNHAGVGAAMMIVVDGTMTQNGVKVRVSN HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEECC DAGVTGQYWKVFYRAIGV CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA