| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025489
Identifier: 238025489
GI number: 238025489
Start: 2710414
End: 2710854
Strand: Direct
Name: 238025489
Synonym: bglu_2g21840
Alternate gene names: NA
Gene position: 2710414-2710854 (Clockwise)
Preceding gene: 238025488
Following gene: 238025490
Centisome position: 95.86
GC content: 66.67
Gene sequence:
>441_bases ATGGCGCTGTCCACATATCCGTCTAAGCATGACAGCCAGCTGGTCCGCCGCAAGGCGATGAAAGCCGGCATGAGCGAAGA CCAGTACAAGGATTGGCTGCTGGCGCACTTCGGCGTGCGCTCGGCCGCCGAGCTGTCGGCCAAGCAACGCCGCGAGGCGC ATGCACGTCGGCACAAGCTGCTCGACTTGATGAAGCCGCAGGCCGCGCCTGGCGCATGGAACGAGCCGCAGCCGCGCAAG CTGTCCGCGTTGTGGGCACAGCTCGCGGCGTGCGGCGCGGTGGGCGTGAACACGCCCACCGCATTGGAATCGTGGGCGAC GGGTCGCATTCCGACGCCCGCCGCGCTGCGCTTCGCCCGCGCCGGCCAGTTGCCGTATCTGATCGAAGCCGCGAAGAAAT GGTTACTTCGCGTGCAACCCGATGCCGAAGTGACCGCATGA
Upstream 100 bases:
>100_bases CGTCGAACAGAACAAGCGCACCTCGCATCGATGTTTGCGAACACGGCTCAAGCCCGCGTGTTGCTCGAACACCTGCAACG CAAAGCGAAGGCCCGCTGAC
Downstream 100 bases:
>100_bases ATACGACGCCCCGCATCAACCGTGCTGCGCTGCCCGAGCTGCTGCGCGAACTCATCGACTGCGTCGGTGAGGCGGCTGCG TTCGCGCTGATCGACTGGCG
Product: Mu-like prophage protein gp16
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MALSTYPSKHDSQLVRRKAMKAGMSEDQYKDWLLAHFGVRSAAELSAKQRREAHARRHKLLDLMKPQAAPGAWNEPQPRK LSALWAQLAACGAVGVNTPTALESWATGRIPTPAALRFARAGQLPYLIEAAKKWLLRVQPDAEVTA
Sequences:
>Translated_146_residues MALSTYPSKHDSQLVRRKAMKAGMSEDQYKDWLLAHFGVRSAAELSAKQRREAHARRHKLLDLMKPQAAPGAWNEPQPRK LSALWAQLAACGAVGVNTPTALESWATGRIPTPAALRFARAGQLPYLIEAAKKWLLRVQPDAEVTA >Mature_145_residues ALSTYPSKHDSQLVRRKAMKAGMSEDQYKDWLLAHFGVRSAAELSAKQRREAHARRHKLLDLMKPQAAPGAWNEPQPRKL SALWAQLAACGAVGVNTPTALESWATGRIPTPAALRFARAGQLPYLIEAAKKWLLRVQPDAEVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16136; Mature: 16005
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSTYPSKHDSQLVRRKAMKAGMSEDQYKDWLLAHFGVRSAAELSAKQRREAHARRHKL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LDLMKPQAAPGAWNEPQPRKLSALWAQLAACGAVGVNTPTALESWATGRIPTPAALRFAR HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHH AGQLPYLIEAAKKWLLRVQPDAEVTA CCCCHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure ALSTYPSKHDSQLVRRKAMKAGMSEDQYKDWLLAHFGVRSAAELSAKQRREAHARRHKL CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LDLMKPQAAPGAWNEPQPRKLSALWAQLAACGAVGVNTPTALESWATGRIPTPAALRFAR HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHH AGQLPYLIEAAKKWLLRVQPDAEVTA CCCCHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA