Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025488

Identifier: 238025488

GI number: 238025488

Start: 2708717

End: 2709709

Strand: Direct

Name: 238025488

Synonym: bglu_2g21820

Alternate gene names: NA

Gene position: 2708717-2709709 (Clockwise)

Preceding gene: 238025487

Following gene: 238025489

Centisome position: 95.8

GC content: 62.24

Gene sequence:

>993_bases
ATGACTGCGAAGACCCAAACCGACAACGCCGTGGCTATTCCTGTCGAGTGGCCGGACCATTACAGCGAATCGAACCGCAC
TGAGGCCGCGGCCATCGTCGCGCAACTGAGCGAAATCGGAAAAACACGCTCATGGCTCGCTCGTCTGTCGCGCGTCAACG
TCGGCACGATGTCCACGGTGCTGAACGGAAAGTACGGCACCGAGCCGACGAAGTGGTTGCGCATGATGTCCGACGCGCTC
GCGACGTACACCGGCCGCGCGACGATCACCACGATGCCGCATGTCCAGACGAGCGTGTCTCAGCTCGCGAACGTCGTATG
CGATCGCGCCCGGAGGTACCGCAACTTCGGCGTATTGACGGGCTTCGTCGGTGTCGGCAAGACGGATGCCGTGCGCCAGT
ACAAGGAACAGAACAGCCATACCATCATCATCGACGCCAACCCGAACATGTCGCCGGCCATGATGCTCGATGAGCTGCTG
GCGGCATCGTCGGCCCCTATGGCGCGCACACTCGATGGAAAGTTCTCGTCGATCGCCGAAGCATTGAACGGCACGACGTA
TCTCATCATCGTGGACGAAGCTGAAACGATGATGCCGAGCTGCCTGCATTACCTGCGACGCATTCGCGACAAGGCCGGCA
TCGGCATCGTCCTGGTCGGCACCGATCGGCTGCTGCAGCTCATCAAGCCGAGCTACGGGCAGTTCGATCAAATCCGCTCG
CGTGTCGGTTTCTGGCCGCAGATTGTTCGCGGTGTCTCGCGCGAAGACGCTGGCGCGCTCGCGCAAGCCGCACTGGACGA
CCAGGGCGAGCTGTCCGGCGAAGTGCTGGATGCGCTCTGGCTGTACTGCAGGGGTTCGGCTCGGATGCTCATCGAGAACT
TCATTCCGGCCCTGCGGGACTACGGTCTGAAGAAGAACCACGAACTATCCGCCGACCTGGTGCACGCCGTCGCACGCGAC
GCGCTGCTGCTCGGCGAGCAACGTAGTGCGTGA

Upstream 100 bases:

>100_bases
GGCGCAGCTCCCCGACGTCAGCATTCAACCCGTCATCGATCTGAATCGATCCGCGAAGGGCATCGTGATCGATCTGCTCG
ACAACGAATAAGGAGCGACC

Downstream 100 bases:

>100_bases
GGCCACCATGACGAACCAAACTGATCCGCTTCGCTGTAAGGCGCTGGCCATGCACTTGCTCAACTTCCAGCTGCAGTTCG
AGCAGGAGCGCTCCGTCGCG

Product: putative phage DNA transposition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDAL
ATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELL
AASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS
RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARD
ALLLGEQRSA

Sequences:

>Translated_330_residues
MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDAL
ATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELL
AASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS
RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARD
ALLLGEQRSA
>Mature_329_residues
TAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDALA
TYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLA
ASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRSR
VGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARDA
LLLGEQRSA

Specific function: This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication [H]

COG id: COG2842

COG function: function code R; Uncharacterized ATPase, putative transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009084
- InterPro:   IPR001387 [H]

Pfam domain/function: PF09077 Phage-MuB_C [H]

EC number: NA

Molecular weight: Translated: 36276; Mature: 36145

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTV
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LNGKYGTEPTKWLRMMSDALATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLT
HCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
GFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLAASSAPMARTLDGKFSSIAE
HHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHH
ALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS
HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCHHHHHH
RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRD
HHCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YGLKKNHELSADLVHAVARDALLLGEQRSA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTV
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LNGKYGTEPTKWLRMMSDALATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLT
HCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
GFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLAASSAPMARTLDGKFSSIAE
HHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHH
ALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS
HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCHHHHHH
RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRD
HHCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YGLKKNHELSADLVHAVARDALLLGEQRSA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]