| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025488
Identifier: 238025488
GI number: 238025488
Start: 2708717
End: 2709709
Strand: Direct
Name: 238025488
Synonym: bglu_2g21820
Alternate gene names: NA
Gene position: 2708717-2709709 (Clockwise)
Preceding gene: 238025487
Following gene: 238025489
Centisome position: 95.8
GC content: 62.24
Gene sequence:
>993_bases ATGACTGCGAAGACCCAAACCGACAACGCCGTGGCTATTCCTGTCGAGTGGCCGGACCATTACAGCGAATCGAACCGCAC TGAGGCCGCGGCCATCGTCGCGCAACTGAGCGAAATCGGAAAAACACGCTCATGGCTCGCTCGTCTGTCGCGCGTCAACG TCGGCACGATGTCCACGGTGCTGAACGGAAAGTACGGCACCGAGCCGACGAAGTGGTTGCGCATGATGTCCGACGCGCTC GCGACGTACACCGGCCGCGCGACGATCACCACGATGCCGCATGTCCAGACGAGCGTGTCTCAGCTCGCGAACGTCGTATG CGATCGCGCCCGGAGGTACCGCAACTTCGGCGTATTGACGGGCTTCGTCGGTGTCGGCAAGACGGATGCCGTGCGCCAGT ACAAGGAACAGAACAGCCATACCATCATCATCGACGCCAACCCGAACATGTCGCCGGCCATGATGCTCGATGAGCTGCTG GCGGCATCGTCGGCCCCTATGGCGCGCACACTCGATGGAAAGTTCTCGTCGATCGCCGAAGCATTGAACGGCACGACGTA TCTCATCATCGTGGACGAAGCTGAAACGATGATGCCGAGCTGCCTGCATTACCTGCGACGCATTCGCGACAAGGCCGGCA TCGGCATCGTCCTGGTCGGCACCGATCGGCTGCTGCAGCTCATCAAGCCGAGCTACGGGCAGTTCGATCAAATCCGCTCG CGTGTCGGTTTCTGGCCGCAGATTGTTCGCGGTGTCTCGCGCGAAGACGCTGGCGCGCTCGCGCAAGCCGCACTGGACGA CCAGGGCGAGCTGTCCGGCGAAGTGCTGGATGCGCTCTGGCTGTACTGCAGGGGTTCGGCTCGGATGCTCATCGAGAACT TCATTCCGGCCCTGCGGGACTACGGTCTGAAGAAGAACCACGAACTATCCGCCGACCTGGTGCACGCCGTCGCACGCGAC GCGCTGCTGCTCGGCGAGCAACGTAGTGCGTGA
Upstream 100 bases:
>100_bases GGCGCAGCTCCCCGACGTCAGCATTCAACCCGTCATCGATCTGAATCGATCCGCGAAGGGCATCGTGATCGATCTGCTCG ACAACGAATAAGGAGCGACC
Downstream 100 bases:
>100_bases GGCCACCATGACGAACCAAACTGATCCGCTTCGCTGTAAGGCGCTGGCCATGCACTTGCTCAACTTCCAGCTGCAGTTCG AGCAGGAGCGCTCCGTCGCG
Product: putative phage DNA transposition protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDAL ATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELL AASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARD ALLLGEQRSA
Sequences:
>Translated_330_residues MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDAL ATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELL AASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARD ALLLGEQRSA >Mature_329_residues TAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTVLNGKYGTEPTKWLRMMSDALA TYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLTGFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLA ASSAPMARTLDGKFSSIAEALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRSR VGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRDYGLKKNHELSADLVHAVARDA LLLGEQRSA
Specific function: This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication [H]
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009084 - InterPro: IPR001387 [H]
Pfam domain/function: PF09077 Phage-MuB_C [H]
EC number: NA
Molecular weight: Translated: 36276; Mature: 36145
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTV CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LNGKYGTEPTKWLRMMSDALATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLT HCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH GFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLAASSAPMARTLDGKFSSIAE HHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHH ALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCHHHHHH RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRD HHCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YGLKKNHELSADLVHAVARDALLLGEQRSA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAKTQTDNAVAIPVEWPDHYSESNRTEAAAIVAQLSEIGKTRSWLARLSRVNVGTMSTV CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LNGKYGTEPTKWLRMMSDALATYTGRATITTMPHVQTSVSQLANVVCDRARRYRNFGVLT HCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH GFVGVGKTDAVRQYKEQNSHTIIIDANPNMSPAMMLDELLAASSAPMARTLDGKFSSIAE HHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHH ALNGTTYLIIVDEAETMMPSCLHYLRRIRDKAGIGIVLVGTDRLLQLIKPSYGQFDQIRS HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCHHHHHH RVGFWPQIVRGVSREDAGALAQAALDDQGELSGEVLDALWLYCRGSARMLIENFIPALRD HHCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YGLKKNHELSADLVHAVARDALLLGEQRSA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]