Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025487

Identifier: 238025487

GI number: 238025487

Start: 2707097

End: 2708707

Strand: Direct

Name: 238025487

Synonym: bglu_2g21810

Alternate gene names: NA

Gene position: 2707097-2708707 (Clockwise)

Preceding gene: 238025486

Following gene: 238025488

Centisome position: 95.75

GC content: 63.07

Gene sequence:

>1611_bases
TTGAAATCCGACATCATGACCAGCCGAGTTCCGGCTGCGCTCAATAGCGATCCGTGGCTGATCGCCACCGAAGCGCAGCG
GCAGACGGCTGAGCTGCGTCATCAGCTGATCGGCCCCGGCGTGCAACTGATCCAATCCGGCGCGAGCCTCAACAACGTTG
CAGCGCTGCTGGCCGAGCGCCTGCGCGACACCAATTCGGCAGTCCAGAAACAGCTGCTGGACCGACTGGGTGAGGTGCCG
TCCGTGTCCACCCTGAAGCGATGGCTGTCCGGCTACCGGCGCGAAGGCAAGATCGGCTTGCTGTCGAACCACACCGGCCG
CGTGCGTAAGGATTACGGCTGGGAGCTGCGCGCAACCGCGCTGTACAACTTGCCTAGCAAGCCGACCTACGCTGCGGTCG
CGCTGAAGCTGCGCAAAGAGGGATTCGACACCGCGACCGACTCGCGCGTGACCCGTTACCTGAAGTCATTGCCGGCGACG
CTCGGCGAGAACAGCCCCGCCCGCGTCGGCAAGCATTTGCACAAGCTGCGGCACCAGAAATACCAGCCACGCACGCTCGA
ACAAATCAAGGTCGGCGACATCTACGCGGGCGATGGCCACACGAGCGATTGCTACGTGGCACACCCGAACACGGGCGGTC
TGTTCCGGCCCGAGCTGACCGCGTTCATCGACATTCGGTCGCGGTACGTGCCGGGCTGGTATCTGTCCGAATCGGAATCG
GCGCTGTCGACGGTGTTCGCTCTGTCACACGCGATGCAGACTTACGACCACCTGCCGCTGTTCCTCTACCTCGACCGAGG
TGCAGGCTATCGCGCCAAGATGCTTAACGACCTTGCGACGGGTTTCTATGCCCGCTTTGAAATGGACGTGATCGGTACGT
TGCCGGGCAACCCGCACGGCAAGGGCTGGATCGAACGCTGGTTCCGCACGGTGCGCGACCACCACGACAAGTTTTTCGCG
GGAGGTAGGTTCTACTGCGGCGACGACATGGCCGCAGAGGTGAATCGCCGCCTGTCCGTCGAGGTGCGGTCGGGCAAGCG
CCAGTTGCCGCAGCTAGACGAGTACAGGGCCAGTCTGGCGAACTTCATCCACGAATACAACCACACGCCGATGGACGTGC
TGGATGGCCGCACGCCTGCTCAGGCGTGGGCGTCGCTCCAACGCAACCCGGTCGTGTTGTCCGCCGAAGCAATCGTCCGG
CCGCGGGAGAAACGCACCGTGCGCCGCCAGATGGTCGAACTGCACAAACGTCAGTACTACGCGGCCGAACTGGCGCTGTA
CGACGGCAAGTCGCTGACGATCGAATACGACTTGCACGACGACCGCACGGTGTGGCTGTACGACGCGAAAGACCAGTTCG
TGTGCCAGGCCGCAATCGTCCGCACGGTCGGCGTCGTGCCGCAGTCGCGCCTGGATGAACAGCGCGAAAAGCGCCTGCAA
GGCCAGATCAAGCGCCTGGAGCGCAAGACCGAGGAGGCCCGTGCACGTGCCCAGGACAGCATCACTGTCGAAGAACAACT
GGCGCAGCTCCCCGACGTCAGCATTCAACCCGTCATCGATCTGAATCGATCCGCGAAGGGCATCGTGATCGATCTGCTCG
ACAACGAATAA

Upstream 100 bases:

>100_bases
CCGCCCACGCAAGGTAGGCCGGCCTCGCAACGCCCCGACGAAATAATCCATCCATCCGACCGACTGCCGCCCGAACAGGT
GCGATATGCGATCCGTACTC

Downstream 100 bases:

>100_bases
GGAGCGACCATGACTGCGAAGACCCAAACCGACAACGCCGTGGCTATTCCTGTCGAGTGGCCGGACCATTACAGCGAATC
GAACCGCACTGAGGCCGCGG

Product: transposase

Products: NA

Alternate protein names: Phage Transposase; Transposase-Like Mu; Bacteriophage Transposase A Protein; Bacteriophage Transposase; Integrase Catalytic Region; Transposase A; Integrase Catalytic Subunit; Transposase/Recombinase; Phage Transposition Protein

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKSDIMTSRVPAALNSDPWLIATEAQRQTAELRHQLIGPGVQLIQSGASLNNVAALLAERLRDTNSAVQKQLLDRLGEVP
SVSTLKRWLSGYRREGKIGLLSNHTGRVRKDYGWELRATALYNLPSKPTYAAVALKLRKEGFDTATDSRVTRYLKSLPAT
LGENSPARVGKHLHKLRHQKYQPRTLEQIKVGDIYAGDGHTSDCYVAHPNTGGLFRPELTAFIDIRSRYVPGWYLSESES
ALSTVFALSHAMQTYDHLPLFLYLDRGAGYRAKMLNDLATGFYARFEMDVIGTLPGNPHGKGWIERWFRTVRDHHDKFFA
GGRFYCGDDMAAEVNRRLSVEVRSGKRQLPQLDEYRASLANFIHEYNHTPMDVLDGRTPAQAWASLQRNPVVLSAEAIVR
PREKRTVRRQMVELHKRQYYAAELALYDGKSLTIEYDLHDDRTVWLYDAKDQFVCQAAIVRTVGVVPQSRLDEQREKRLQ
GQIKRLERKTEEARARAQDSITVEEQLAQLPDVSIQPVIDLNRSAKGIVIDLLDNE

Sequences:

>Translated_536_residues
MKSDIMTSRVPAALNSDPWLIATEAQRQTAELRHQLIGPGVQLIQSGASLNNVAALLAERLRDTNSAVQKQLLDRLGEVP
SVSTLKRWLSGYRREGKIGLLSNHTGRVRKDYGWELRATALYNLPSKPTYAAVALKLRKEGFDTATDSRVTRYLKSLPAT
LGENSPARVGKHLHKLRHQKYQPRTLEQIKVGDIYAGDGHTSDCYVAHPNTGGLFRPELTAFIDIRSRYVPGWYLSESES
ALSTVFALSHAMQTYDHLPLFLYLDRGAGYRAKMLNDLATGFYARFEMDVIGTLPGNPHGKGWIERWFRTVRDHHDKFFA
GGRFYCGDDMAAEVNRRLSVEVRSGKRQLPQLDEYRASLANFIHEYNHTPMDVLDGRTPAQAWASLQRNPVVLSAEAIVR
PREKRTVRRQMVELHKRQYYAAELALYDGKSLTIEYDLHDDRTVWLYDAKDQFVCQAAIVRTVGVVPQSRLDEQREKRLQ
GQIKRLERKTEEARARAQDSITVEEQLAQLPDVSIQPVIDLNRSAKGIVIDLLDNE
>Mature_536_residues
MKSDIMTSRVPAALNSDPWLIATEAQRQTAELRHQLIGPGVQLIQSGASLNNVAALLAERLRDTNSAVQKQLLDRLGEVP
SVSTLKRWLSGYRREGKIGLLSNHTGRVRKDYGWELRATALYNLPSKPTYAAVALKLRKEGFDTATDSRVTRYLKSLPAT
LGENSPARVGKHLHKLRHQKYQPRTLEQIKVGDIYAGDGHTSDCYVAHPNTGGLFRPELTAFIDIRSRYVPGWYLSESES
ALSTVFALSHAMQTYDHLPLFLYLDRGAGYRAKMLNDLATGFYARFEMDVIGTLPGNPHGKGWIERWFRTVRDHHDKFFA
GGRFYCGDDMAAEVNRRLSVEVRSGKRQLPQLDEYRASLANFIHEYNHTPMDVLDGRTPAQAWASLQRNPVVLSAEAIVR
PREKRTVRRQMVELHKRQYYAAELALYDGKSLTIEYDLHDDRTVWLYDAKDQFVCQAAIVRTVGVVPQSRLDEQREKRLQ
GQIKRLERKTEEARARAQDSITVEEQLAQLPDVSIQPVIDLNRSAKGIVIDLLDNE

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60859; Mature: 60859

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50994 INTEGRASE ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDIMTSRVPAALNSDPWLIATEAQRQTAELRHQLIGPGVQLIQSGASLNNVAALLAER
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHH
LRDTNSAVQKQLLDRLGEVPSVSTLKRWLSGYRREGKIGLLSNHTGRVRKDYGWELRATA
HHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEE
LYNLPSKPTYAAVALKLRKEGFDTATDSRVTRYLKSLPATLGENSPARVGKHLHKLRHQK
EECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YQPRTLEQIKVGDIYAGDGHTSDCYVAHPNTGGLFRPELTAFIDIRSRYVPGWYLSESES
CCCCHHHHEEECEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHH
ALSTVFALSHAMQTYDHLPLFLYLDRGAGYRAKMLNDLATGFYARFEMDVIGTLPGNPHG
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
KGWIERWFRTVRDHHDKFFAGGRFYCGDDMAAEVNRRLSVEVRSGKRQLPQLDEYRASLA
CHHHHHHHHHHHHHCHHEEECCEEEECCCHHHHHCCEEEEEECCCCCCCCCHHHHHHHHH
NFIHEYNHTPMDVLDGRTPAQAWASLQRNPVVLSAEAIVRPREKRTVRRQMVELHKRQYY
HHHHHHCCCCHHHHCCCCHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHH
AAELALYDGKSLTIEYDLHDDRTVWLYDAKDQFVCQAAIVRTVGVVPQSRLDEQREKRLQ
HHHEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GQIKRLERKTEEARARAQDSITVEEQLAQLPDVSIQPVIDLNRSAKGIVIDLLDNE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCC
>Mature Secondary Structure
MKSDIMTSRVPAALNSDPWLIATEAQRQTAELRHQLIGPGVQLIQSGASLNNVAALLAER
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHH
LRDTNSAVQKQLLDRLGEVPSVSTLKRWLSGYRREGKIGLLSNHTGRVRKDYGWELRATA
HHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEE
LYNLPSKPTYAAVALKLRKEGFDTATDSRVTRYLKSLPATLGENSPARVGKHLHKLRHQK
EECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YQPRTLEQIKVGDIYAGDGHTSDCYVAHPNTGGLFRPELTAFIDIRSRYVPGWYLSESES
CCCCHHHHEEECEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHH
ALSTVFALSHAMQTYDHLPLFLYLDRGAGYRAKMLNDLATGFYARFEMDVIGTLPGNPHG
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
KGWIERWFRTVRDHHDKFFAGGRFYCGDDMAAEVNRRLSVEVRSGKRQLPQLDEYRASLA
CHHHHHHHHHHHHHCHHEEECCEEEECCCHHHHHCCEEEEEECCCCCCCCCHHHHHHHHH
NFIHEYNHTPMDVLDGRTPAQAWASLQRNPVVLSAEAIVRPREKRTVRRQMVELHKRQYY
HHHHHHCCCCHHHHCCCCHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHH
AAELALYDGKSLTIEYDLHDDRTVWLYDAKDQFVCQAAIVRTVGVVPQSRLDEQREKRLQ
HHHEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GQIKRLERKTEEARARAQDSITVEEQLAQLPDVSIQPVIDLNRSAKGIVIDLLDNE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA