| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is bcsB [H]
Identifier: 238025440
GI number: 238025440
Start: 2639859
End: 2642384
Strand: Direct
Name: bcsB [H]
Synonym: bglu_2g21300
Alternate gene names: 238025440
Gene position: 2639859-2642384 (Clockwise)
Preceding gene: 238025439
Following gene: 238025441
Centisome position: 93.37
GC content: 73.48
Gene sequence:
>2526_bases ATGCCGGGCGCGCGGCCGGCCACGAAGCGGGACACGCCGCGCGCCGGACGGCCGGCCGCCGCCGCGCGCGCGGCGGGCCT GCCGCGCGCGGCGCGCGCGCTCGTCTGCGGCCTCGCGCTGCAGTTCGCCATGACGCCGTTCGCGGCGCTGGCCGCCGGCG CCGCGCAGCCGGGCGAGGCCGGCGACGCTCAGGCCGCGACCCGGTCGGGAGCGGTGAGCGGTTCGGTCGGTGCCGTGCCG GCGCCGTCGGCCGCGCGCCGGTTCGATGCGCAGGCCGGCTCGCAGCCGGCCGTCGCGCTGGCCGTGGCGCCGCTGCCGCC CGAGCAGCAGAAGCTGCTCGGCATGCGCCCGCCGACCACCGCCAACCCGGGCACGCTGCTGCCGGGCGGGCGCCGCCAGA CGCTGAGCTTCGCCGATCTCGGCGCGCTCGATCCGCTGCAGCTGCGCGGCACCGAAGGCCAGAACGGCGTGCCGTTCTCG GTGCGCAACGACGAGGTGGTGACCGCCGCCACGCTGCACCTGATCTACAGCTACTCGCCGGCGCTGCTGCCCGACTTGTC GCAGCTGAAGGTGCTGATCAACGGCGAGGTGGCCGCCACGCTGCCGGTGCCGCAATCGCAGGCCGGCACCACGGTGGCGC GCGACGTGCCGCTCGATCCGCGCTTCATCACCGAATTCAACCACCTGAACATCGAGCTGATCGGCCATTACACGCGGCGC TGCGAGGACCCGGCGAACACCACGCTGTGGGCCACCGTCAGCAATGCCAGCTCGCTGGACCTCACCTACGCGTCGCTGCC GGCGAAGGCCGATCTCGGCACGCTGCCCGCGCCGTTCTTCGACCGCCGCGACGTGCGCCGGCTCGAGCTGCCGGTGGTGT TCGCCGAGAAGCCCGACCCGGCCACGCTGGAGGCGGCCGGCACGCTCACCTCGTGGTTCGGCGCGCTGGCCGGCTACCGC GGCGCGCTGTTCCCGGCCCAGGTGGGCAGCCTGCCGCTCACGGGCAACGCGGTGGTGTTCGCGCAGGCCGGCGCGCAGCT GGCCGGCCTGACGTTGCCGGCCGTGACCGGCCCGACCCTCGCGGTGGTGCCGCGCGACGGCAATGCGCGCGGCTCGCTGC TGCTGGTGCTGGGCCGCAACGGCGACGAGCTGAAGACCGCCGCCAGCGCGCTCGCGCTGGGCCAGAGCACGCTGAACGGC AGCCTCGCCACCATCAACCAGCTGGTCACGCTCAAGCCGCGCGCGCCCTACGACGCGCCGAACTGGCTGCCCGCCAACCG CCCGGTCCACCTGGGCGAGCTGGCCGACCCGCGCGCGCTGTCGGTGCAGGGCTACAACGCCGCCCCGATCTCGATCACGC TGCGCGTGCCGCCCGATCTGTTCATGTGGAACACCCCGGGCGCGCCGCTCGACCTGCGCTATCGCTACTCGGTGCGGCCG AAGCCGGACCGCTCGTCGCTGAACGTCAGCGTGAACGGCCACTTCGTGCAGGCGCTGCCGATCCCGGCCGCCGATCCGTC GCGCTCGGGCATCGCGCGCTTTCTGGGCCGCTTCGGCGTGCAGGCCGGCGACACCGGCAGCGCGCGCCACCTCGTGCGGA TTCCGCCGCTGCTGCTCACGCCGCATTCGCAGCTGGAGCTCACCTACTACTACGACATCCCGAACACCGGCGAATGCTCC GGCGCGCTGCTGCCGAACGTGGCGGGCACCATCGAGCCCGATTCGACCATCGACCTGTCGGACTTCCCGCACTACATGGC GCTGCCCGATCTGGCCGCGTTCGCCAACAGCGGCTTCCCGTTCACCCGGCTGGCCGATCTCTCGCAGACTGCGGCGATCC TGCCCGACGCGCCGACGGCCGGCGACTACAGCCTGTTCCTGCTGACCATGGGCCGGATGGGCGAATCGACCGGCTACCCG GTGACCGGCGTGACGGTGGGCGGCCCCGGCGACGTCGAGCGCTTCGCCGACAAGGATCTGCTGGTGCTCGGCGGCCCCGG CCGCCAGCCGCTCCTGCAGCGCTGGGCCAAGCAGATGCCGTTCTCGAGCGACGGCGACGCCGCCACCTTCACGCTGTCCG ACATCGGCCCGCGCATCGCCGACTGGTGGCTCGGCCCGCACGGCATCGAGCGCGCCCCGGCGCGCGCCGATCTCTCGCTC GTGAGCAACGGCGACAGCGCGCTGATCGCCGGCTTCGAATCGCCGCTGCACGCGGGGCGCAGCGTGGTCGCGCTGATCAG CTCGCCGGGCGAGTCGGAGGCCGGCATCACCTCGGCGCTGCTCGACGCCGACGTGCTGCCGCAGGTGCAGGGCGCGATGG ACGTGATCCACGGCCGCTCGGTGACCGTCGCCTCGAACGGCAACACCTACTATCTCGGCAGGCTCCCGCCGTTCGAATAC GCACGCTGGGCGCTGTCGTCACATCCGCTGCTGCTGGCGTTCAGCGGCGTTCTTGCGGCGATCGTGATCGCCGCGCTGTT CTATCGCGCGCTGCGCCGCATCGCTGCGCGCCGACTTCAGGATTGA
Upstream 100 bases:
>100_bases CCACGGACAGCGACGGCAGATGAACCAAGGAAGCACCCTGTCAACTCCCTGCCAAGGCAAGGGCGATGCGGACCACGCCG GCGACGAGACCGGCCGCCAC
Downstream 100 bases:
>100_bases GGCGATGCGTGTCCTGTTCCAGCGCGGCTGCGGCCGCCCACGTCCTGCGCGGCGCCCGCTCGCCGCACTGACCACCGCCG TGGCCGGCCTCGGCGCCTGC
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit [H]
Number of amino acids: Translated: 841; Mature: 840
Protein sequence:
>841_residues MPGARPATKRDTPRAGRPAAAARAAGLPRAARALVCGLALQFAMTPFAALAAGAAQPGEAGDAQAATRSGAVSGSVGAVP APSAARRFDAQAGSQPAVALAVAPLPPEQQKLLGMRPPTTANPGTLLPGGRRQTLSFADLGALDPLQLRGTEGQNGVPFS VRNDEVVTAATLHLIYSYSPALLPDLSQLKVLINGEVAATLPVPQSQAGTTVARDVPLDPRFITEFNHLNIELIGHYTRR CEDPANTTLWATVSNASSLDLTYASLPAKADLGTLPAPFFDRRDVRRLELPVVFAEKPDPATLEAAGTLTSWFGALAGYR GALFPAQVGSLPLTGNAVVFAQAGAQLAGLTLPAVTGPTLAVVPRDGNARGSLLLVLGRNGDELKTAASALALGQSTLNG SLATINQLVTLKPRAPYDAPNWLPANRPVHLGELADPRALSVQGYNAAPISITLRVPPDLFMWNTPGAPLDLRYRYSVRP KPDRSSLNVSVNGHFVQALPIPAADPSRSGIARFLGRFGVQAGDTGSARHLVRIPPLLLTPHSQLELTYYYDIPNTGECS GALLPNVAGTIEPDSTIDLSDFPHYMALPDLAAFANSGFPFTRLADLSQTAAILPDAPTAGDYSLFLLTMGRMGESTGYP VTGVTVGGPGDVERFADKDLLVLGGPGRQPLLQRWAKQMPFSSDGDAATFTLSDIGPRIADWWLGPHGIERAPARADLSL VSNGDSALIAGFESPLHAGRSVVALISSPGESEAGITSALLDADVLPQVQGAMDVIHGRSVTVASNGNTYYLGRLPPFEY ARWALSSHPLLLAFSGVLAAIVIAALFYRALRRIAARRLQD
Sequences:
>Translated_841_residues MPGARPATKRDTPRAGRPAAAARAAGLPRAARALVCGLALQFAMTPFAALAAGAAQPGEAGDAQAATRSGAVSGSVGAVP APSAARRFDAQAGSQPAVALAVAPLPPEQQKLLGMRPPTTANPGTLLPGGRRQTLSFADLGALDPLQLRGTEGQNGVPFS VRNDEVVTAATLHLIYSYSPALLPDLSQLKVLINGEVAATLPVPQSQAGTTVARDVPLDPRFITEFNHLNIELIGHYTRR CEDPANTTLWATVSNASSLDLTYASLPAKADLGTLPAPFFDRRDVRRLELPVVFAEKPDPATLEAAGTLTSWFGALAGYR GALFPAQVGSLPLTGNAVVFAQAGAQLAGLTLPAVTGPTLAVVPRDGNARGSLLLVLGRNGDELKTAASALALGQSTLNG SLATINQLVTLKPRAPYDAPNWLPANRPVHLGELADPRALSVQGYNAAPISITLRVPPDLFMWNTPGAPLDLRYRYSVRP KPDRSSLNVSVNGHFVQALPIPAADPSRSGIARFLGRFGVQAGDTGSARHLVRIPPLLLTPHSQLELTYYYDIPNTGECS GALLPNVAGTIEPDSTIDLSDFPHYMALPDLAAFANSGFPFTRLADLSQTAAILPDAPTAGDYSLFLLTMGRMGESTGYP VTGVTVGGPGDVERFADKDLLVLGGPGRQPLLQRWAKQMPFSSDGDAATFTLSDIGPRIADWWLGPHGIERAPARADLSL VSNGDSALIAGFESPLHAGRSVVALISSPGESEAGITSALLDADVLPQVQGAMDVIHGRSVTVASNGNTYYLGRLPPFEY ARWALSSHPLLLAFSGVLAAIVIAALFYRALRRIAARRLQD >Mature_840_residues PGARPATKRDTPRAGRPAAAARAAGLPRAARALVCGLALQFAMTPFAALAAGAAQPGEAGDAQAATRSGAVSGSVGAVPA PSAARRFDAQAGSQPAVALAVAPLPPEQQKLLGMRPPTTANPGTLLPGGRRQTLSFADLGALDPLQLRGTEGQNGVPFSV RNDEVVTAATLHLIYSYSPALLPDLSQLKVLINGEVAATLPVPQSQAGTTVARDVPLDPRFITEFNHLNIELIGHYTRRC EDPANTTLWATVSNASSLDLTYASLPAKADLGTLPAPFFDRRDVRRLELPVVFAEKPDPATLEAAGTLTSWFGALAGYRG ALFPAQVGSLPLTGNAVVFAQAGAQLAGLTLPAVTGPTLAVVPRDGNARGSLLLVLGRNGDELKTAASALALGQSTLNGS LATINQLVTLKPRAPYDAPNWLPANRPVHLGELADPRALSVQGYNAAPISITLRVPPDLFMWNTPGAPLDLRYRYSVRPK PDRSSLNVSVNGHFVQALPIPAADPSRSGIARFLGRFGVQAGDTGSARHLVRIPPLLLTPHSQLELTYYYDIPNTGECSG ALLPNVAGTIEPDSTIDLSDFPHYMALPDLAAFANSGFPFTRLADLSQTAAILPDAPTAGDYSLFLLTMGRMGESTGYPV TGVTVGGPGDVERFADKDLLVLGGPGRQPLLQRWAKQMPFSSDGDAATFTLSDIGPRIADWWLGPHGIERAPARADLSLV SNGDSALIAGFESPLHAGRSVVALISSPGESEAGITSALLDADVLPQVQGAMDVIHGRSVTVASNGNTYYLGRLPPFEYA RWALSSHPLLLAFSGVLAAIVIAALFYRALRRIAARRLQD
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family [H]
Homologues:
Organism=Escherichia coli, GI1789952, Length=769, Percent_Identity=34.4603381014304, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003920 - InterPro: IPR018513 [H]
Pfam domain/function: PF03170 BcsB [H]
EC number: NA
Molecular weight: Translated: 88075; Mature: 87944
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGARPATKRDTPRAGRPAAAARAAGLPRAARALVCGLALQFAMTPFAALAAGAAQPGEA CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDAQAATRSGAVSGSVGAVPAPSAARRFDAQAGSQPAVALAVAPLPPEQQKLLGMRPPTT CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCC ANPGTLLPGGRRQTLSFADLGALDPLQLRGTEGQNGVPFSVRNDEVVTAATLHLIYSYSP CCCCCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCEEHHEEEEHHHCCCC ALLPDLSQLKVLINGEVAATLPVPQSQAGTTVARDVPLDPRFITEFNHLNIELIGHYTRR CCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCCHHEEECCCEEEEEEECHHHH CEDPANTTLWATVSNASSLDLTYASLPAKADLGTLPAPFFDRRDVRRLELPVVFAEKPDP CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC ATLEAAGTLTSWFGALAGYRGALFPAQVGSLPLTGNAVVFAQAGAQLAGLTLPAVTGPTL CCEEHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECEEECCCCCCEE AVVPRDGNARGSLLLVLGRNGDELKTAASALALGQSTLNGSLATINQLVTLKPRAPYDAP EEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCC NWLPANRPVHLGELADPRALSVQGYNAAPISITLRVPPDLFMWNTPGAPLDLRYRYSVRP CCCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEEECCC KPDRSSLNVSVNGHFVQALPIPAADPSRSGIARFLGRFGVQAGDTGSARHLVRIPPLLLT CCCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEC PHSQLELTYYYDIPNTGECSGALLPNVAGTIEPDSTIDLSDFPHYMALPDLAAFANSGFP CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCHHHHHHHCCCCC FTRLADLSQTAAILPDAPTAGDYSLFLLTMGRMGESTGYPVTGVTVGGPGDVERFADKDL HHHHHHCHHHHEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCCE LVLGGPGRQPLLQRWAKQMPFSSDGDAATFTLSDIGPRIADWWLGPHGIERAPARADLSL EEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHCCCCCCCCCCCCCCCEEE VSNGDSALIAGFESPLHAGRSVVALISSPGESEAGITSALLDADVLPQVQGAMDVIHGRS EECCCCEEEEECCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VTVASNGNTYYLGRLPPFEYARWALSSHPLLLAFSGVLAAIVIAALFYRALRRIAARRLQ EEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC D C >Mature Secondary Structure PGARPATKRDTPRAGRPAAAARAAGLPRAARALVCGLALQFAMTPFAALAAGAAQPGEA CCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDAQAATRSGAVSGSVGAVPAPSAARRFDAQAGSQPAVALAVAPLPPEQQKLLGMRPPTT CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCC ANPGTLLPGGRRQTLSFADLGALDPLQLRGTEGQNGVPFSVRNDEVVTAATLHLIYSYSP CCCCCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCEEHHEEEEHHHCCCC ALLPDLSQLKVLINGEVAATLPVPQSQAGTTVARDVPLDPRFITEFNHLNIELIGHYTRR CCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCCHHEEECCCEEEEEEECHHHH CEDPANTTLWATVSNASSLDLTYASLPAKADLGTLPAPFFDRRDVRRLELPVVFAEKPDP CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC ATLEAAGTLTSWFGALAGYRGALFPAQVGSLPLTGNAVVFAQAGAQLAGLTLPAVTGPTL CCEEHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECEEECCCCCCEE AVVPRDGNARGSLLLVLGRNGDELKTAASALALGQSTLNGSLATINQLVTLKPRAPYDAP EEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCC NWLPANRPVHLGELADPRALSVQGYNAAPISITLRVPPDLFMWNTPGAPLDLRYRYSVRP CCCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEEECCC KPDRSSLNVSVNGHFVQALPIPAADPSRSGIARFLGRFGVQAGDTGSARHLVRIPPLLLT CCCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEC PHSQLELTYYYDIPNTGECSGALLPNVAGTIEPDSTIDLSDFPHYMALPDLAAFANSGFP CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCHHHHHHHCCCCC FTRLADLSQTAAILPDAPTAGDYSLFLLTMGRMGESTGYPVTGVTVGGPGDVERFADKDL HHHHHHCHHHHEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCCE LVLGGPGRQPLLQRWAKQMPFSSDGDAATFTLSDIGPRIADWWLGPHGIERAPARADLSL EEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHCCCCCCCCCCCCCCCEEE VSNGDSALIAGFESPLHAGRSVVALISSPGESEAGITSALLDADVLPQVQGAMDVIHGRS EECCCCEEEEECCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VTVASNGNTYYLGRLPPFEYARWALSSHPLLLAFSGVLAAIVIAALFYRALRRIAARRLQ EEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12019221 [H]