| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is map [H]
Identifier: 238025400
GI number: 238025400
Start: 2580718
End: 2581530
Strand: Direct
Name: map [H]
Synonym: bglu_2g20870
Alternate gene names: 238025400
Gene position: 2580718-2581530 (Clockwise)
Preceding gene: 238025399
Following gene: 238025405
Centisome position: 91.28
GC content: 68.88
Gene sequence:
>813_bases ATGATGGCGCGCGCCCAGAAAGTCACGCTGCGCTCGCAGGCGGAGATCGCGCAGGCGCGCGAGGCGGGCAAGCTCGCGGC CGACGTGCTGCGCATGATCGGCGAACACGTCAAGCCCGGCGTCACCACCGACGAGCTCGACACGCTGTGCCGCGAGTTCA TCGTCGGCGTGCAGCACGCCACCCCCGCGAACATCGGCTACCACGGCTTCCCGAAGACGATCTGCGCATCGGTGAACCAC GTGGTCTGCCACGGCATCCCGTCCGGGCACGTGCTGGAGCACGGCGACATCATCAATATCGACGTGGCCGTGATCAAGGA CGGCTGGTTCGGCGACACCAGCCGCATGTACTTCGTGGGCGAGCCCGACGCGCAGGCCAAGCGCCTGGTGGACACCACCT ACGACGCGATGCGTGCCGGCATCCTCGCGGTGCGGCCCGGCGCGACGCTCGGCGACGTGGGCCACGCGATCCAGAGCGTC GCGCATCAGGCCGGCTACAGCGTGGTGCGCGAATACTGCGGGCACGGCATCGGCACCGTCTACCACGACGAGCCGCAGGT GCTGCACTATGGCCGCCCCGGCCTCGGCATGAAGCTGGTGCCCGGCATGATCTTCACGATCGAGCCGATGCTCAACGCGG GCAAGCCCGAGACCAAGCAGCTCGCCGACGGCTGGACGGTGGTCACGAAGGATCGCTCGCTGTCCGCGCAGTGGGAGCAC ATGGTGGTGGTGACCGACGACGGCTTCGAGGTGCTGACGCCCTGGCCGGAAGGCACCGGCGCTTATGCGCCGATCGGGAC GCCGACCGCCTGA
Upstream 100 bases:
>100_bases TGAACCCGACGCTGGCCTATGGCGACATCTGCCAGCTGCTGCTGCGCGCCGAGGCCGGCGCACCGGCCGATCACGACCAC GCCCCGCTGTCGAAGGTCGC
Downstream 100 bases:
>100_bases GCGCCTGAGCCGCGACGGCGTTCAGGCGGCGGCCGGCTCGCCGAGCCAGCGGTACATCACGAAGCAGTCGACATACCCGA GCGTGCGGTGGCGATAGGCG
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMARAQKVTLRSQAEIAQAREAGKLAADVLRMIGEHVKPGVTTDELDTLCREFIVGVQHATPANIGYHGFPKTICASVNH VVCHGIPSGHVLEHGDIINIDVAVIKDGWFGDTSRMYFVGEPDAQAKRLVDTTYDAMRAGILAVRPGATLGDVGHAIQSV AHQAGYSVVREYCGHGIGTVYHDEPQVLHYGRPGLGMKLVPGMIFTIEPMLNAGKPETKQLADGWTVVTKDRSLSAQWEH MVVVTDDGFEVLTPWPEGTGAYAPIGTPTA
Sequences:
>Translated_270_residues MMARAQKVTLRSQAEIAQAREAGKLAADVLRMIGEHVKPGVTTDELDTLCREFIVGVQHATPANIGYHGFPKTICASVNH VVCHGIPSGHVLEHGDIINIDVAVIKDGWFGDTSRMYFVGEPDAQAKRLVDTTYDAMRAGILAVRPGATLGDVGHAIQSV AHQAGYSVVREYCGHGIGTVYHDEPQVLHYGRPGLGMKLVPGMIFTIEPMLNAGKPETKQLADGWTVVTKDRSLSAQWEH MVVVTDDGFEVLTPWPEGTGAYAPIGTPTA >Mature_270_residues MMARAQKVTLRSQAEIAQAREAGKLAADVLRMIGEHVKPGVTTDELDTLCREFIVGVQHATPANIGYHGFPKTICASVNH VVCHGIPSGHVLEHGDIINIDVAVIKDGWFGDTSRMYFVGEPDAQAKRLVDTTYDAMRAGILAVRPGATLGDVGHAIQSV AHQAGYSVVREYCGHGIGTVYHDEPQVLHYGRPGLGMKLVPGMIFTIEPMLNAGKPETKQLADGWTVVTKDRSLSAQWEH MVVVTDDGFEVLTPWPEGTGAYAPIGTPTA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=247, Percent_Identity=41.7004048582996, Blast_Score=209, Evalue=2e-54, Organism=Homo sapiens, GI40385867, Length=250, Percent_Identity=40.4, Blast_Score=202, Evalue=3e-52, Organism=Escherichia coli, GI1786364, Length=253, Percent_Identity=53.7549407114625, Blast_Score=290, Evalue=6e-80, Organism=Caenorhabditis elegans, GI71996291, Length=241, Percent_Identity=40.2489626556017, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6323273, Length=251, Percent_Identity=38.6454183266932, Blast_Score=203, Evalue=2e-53, Organism=Drosophila melanogaster, GI21355531, Length=257, Percent_Identity=40.8560311284047, Blast_Score=201, Evalue=5e-52, Organism=Drosophila melanogaster, GI24583427, Length=246, Percent_Identity=40.2439024390244, Blast_Score=191, Evalue=4e-49,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29074; Mature: 29074
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMARAQKVTLRSQAEIAQAREAGKLAADVLRMIGEHVKPGVTTDELDTLCREFIVGVQHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC TPANIGYHGFPKTICASVNHVVCHGIPSGHVLEHGDIINIDVAVIKDGWFGDTSRMYFVG CCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEECCCEEEEEEEEEECCCCCCCCEEEEEE EPDAQAKRLVDTTYDAMRAGILAVRPGATLGDVGHAIQSVAHQAGYSVVREYCGHGIGTV CCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YHDEPQVLHYGRPGLGMKLVPGMIFTIEPMLNAGKPETKQLADGWTVVTKDRSLSAQWEH ECCCCCEEECCCCCCCCEECCCEEEEEEHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEE MVVVTDDGFEVLTPWPEGTGAYAPIGTPTA EEEEECCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MMARAQKVTLRSQAEIAQAREAGKLAADVLRMIGEHVKPGVTTDELDTLCREFIVGVQHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC TPANIGYHGFPKTICASVNHVVCHGIPSGHVLEHGDIINIDVAVIKDGWFGDTSRMYFVG CCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEECCCEEEEEEEEEECCCCCCCCEEEEEE EPDAQAKRLVDTTYDAMRAGILAVRPGATLGDVGHAIQSVAHQAGYSVVREYCGHGIGTV CCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YHDEPQVLHYGRPGLGMKLVPGMIFTIEPMLNAGKPETKQLADGWTVVTKDRSLSAQWEH ECCCCCEEECCCCCCCCEECCCEEEEEEHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEE MVVVTDDGFEVLTPWPEGTGAYAPIGTPTA EEEEECCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]