| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025405
Identifier: 238025405
GI number: 238025405
Start: 2589411
End: 2589860
Strand: Direct
Name: 238025405
Synonym: bglu_2g20920
Alternate gene names: NA
Gene position: 2589411-2589860 (Clockwise)
Preceding gene: 238025400
Following gene: 238025407
Centisome position: 91.58
GC content: 54.89
Gene sequence:
>450_bases ATGACGACTCGACCTGTCAAGCCAACCAGCACCAGGGGGGGATCTTGCCTCGGCAAATCTTCGGAACCCGGATTCACCCT CATCGAGACGCTGATCGCACTCGCCATCATCGCCATCAGCTTTGCCGCGGCCTCGCGCTCGATCATGATGATGGTCAATT CCGAGGATACGCTCAGGGTGACGACGCTGGCGCATTACTCCGCGGACAATGAATTGACCGAAATAAGGCTGCGCGAGGCA TGGCTGCCGGCCGGTGAAAAACGATACCCGTGCCCGCAAGGAAATTATCTTTTCATTTGCACCCGATCCGTTTCCTACAC CATAAAACGCGGCATCGAGAGGATTGACATAAGCGTGTCGCTGCCTCCCAAGCCGCATCGTTATGCAAGCATGTCTTCTT ATTTTTACGACCCGATTCGGGATTTAGGCCGCGTCAATCCAGACGATTGA
Upstream 100 bases:
>100_bases GAGCCAGTTCAACTCCTCGGCCGAGGGGGTGCCGCCGGCAGGCTTTCCCGCACGTCCGGTGGCGATGCATCGCCGGGCGT TATTTTTTCATCGGCCGACT
Downstream 100 bases:
>100_bases CTTCGCTTGCACTAGCAATCGCGCGGCGCTGTCGCTGATCGAGCGTGCCAGCATGCGGCCGGCGCGTTGGGCTGCAATAT GGTTTAACCGACGCCGCCGT
Product: general secretion pathway protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTTRPVKPTSTRGGSCLGKSSEPGFTLIETLIALAIIAISFAAASRSIMMMVNSEDTLRVTTLAHYSADNELTEIRLREA WLPAGEKRYPCPQGNYLFICTRSVSYTIKRGIERIDISVSLPPKPHRYASMSSYFYDPIRDLGRVNPDD
Sequences:
>Translated_149_residues MTTRPVKPTSTRGGSCLGKSSEPGFTLIETLIALAIIAISFAAASRSIMMMVNSEDTLRVTTLAHYSADNELTEIRLREA WLPAGEKRYPCPQGNYLFICTRSVSYTIKRGIERIDISVSLPPKPHRYASMSSYFYDPIRDLGRVNPDD >Mature_148_residues TTRPVKPTSTRGGSCLGKSSEPGFTLIETLIALAIIAISFAAASRSIMMMVNSEDTLRVTTLAHYSADNELTEIRLREAW LPAGEKRYPCPQGNYLFICTRSVSYTIKRGIERIDISVSLPPKPHRYASMSSYFYDPIRDLGRVNPDD
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16606; Mature: 16475
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRPVKPTSTRGGSCLGKSSEPGFTLIETLIALAIIAISFAAASRSIMMMVNSEDTLRV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE TTLAHYSADNELTEIRLREAWLPAGEKRYPCPQGNYLFICTRSVSYTIKRGIERIDISVS EEEEEECCCCCHHHEEEHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEE LPPKPHRYASMSSYFYDPIRDLGRVNPDD CCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTRPVKPTSTRGGSCLGKSSEPGFTLIETLIALAIIAISFAAASRSIMMMVNSEDTLRV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE TTLAHYSADNELTEIRLREAWLPAGEKRYPCPQGNYLFICTRSVSYTIKRGIERIDISVS EEEEEECCCCCHHHEEEHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEE LPPKPHRYASMSSYFYDPIRDLGRVNPDD CCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA