| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025363
Identifier: 238025363
GI number: 238025363
Start: 2526370
End: 2527371
Strand: Direct
Name: 238025363
Synonym: bglu_2g20390
Alternate gene names: NA
Gene position: 2526370-2527371 (Clockwise)
Preceding gene: 238025360
Following gene: 238025364
Centisome position: 89.36
GC content: 71.56
Gene sequence:
>1002_bases ATGACCTCGCCTACCTCACCCGCGGCCAGCGCGCGCCTGGACAGCCAGTTGGGCCTGCTGCTGCGTTACGCGACGCTGGC CCCGTCGAGCCACAACTCCCAGCCGTGGCACTTCGTCCTCAACGACAACACGATCGCGCTGTGCGCCGACCGCATGCGCG CGCTGGCCGTGATCGACCCCTACGACCGCGAGCTGATCATCAGTTGCGGGGCGGCGCTGCTCAACCTGCGCGTCGCGCTC AGCCGGGCCGGGCTCGCCTACACCATCAGTCCGTTTCCCTCCGAGGTCGATCCCGATCTGCTCGCGCTGGTGCGCGTGTG CAACGACGGCTACATCGACACGGCGCTCGCCGCGCTCGCCGATGCCATCCCGAAACGCGTCACGACCCGCGCCGCGTTCG AGCCCGAGGCGGTTCCGCAGGCGCTGCAGCAGGTCCTGACGTCGGCCGTCATCGCCGAAGGCGCCGGCGCCGTCACGGTC GACTCGATCGCGCAGCGCAGGCAGATCGCCGAGCTGGTCGCCGAGGCCGATCACCAGCAGTTCCGCGATCCGCGCTTCCG TCGCGAGCTGGCCAGCTGGATCGACCCGCGCCGCCATCTGGACGGCATGCCGGCGTTCGCGGCCGGGGTGCCGTCCCTGC TCGACTTCGCCGCGCCGCTGGTGACCAGCGCGGTACGGACTTTCGATCTCGGCAACGGCCTGGCGGCGCTGCATCACCAA CTGGTGGACGCGTCGCCGCTGATCGTCTGCATCACCACCGCGAACGACGACCGCGAGGCCTGGCTGGCCGCCGGCCAGGC CCTGGAGCGGATGCTGCTCGCCGCCACCGACGCCGGCTATACGGCCTCCTACCTGAACCAGCCGATCGAGACGAGCGGCC CGCGGGCCGCGCTATGCCGTCTGCTCGGCCTGCACGGCACCCCGCAATTGCTGCTGCGGATCGGCCGCGGCCCGCAGCTG CCTCACTCGCCGCGCCGCCCGCTGCAGGACGTGGTGTCGTGA
Upstream 100 bases:
>100_bases GCATCCCGTCGCGCGCTTGACATGAGTCAATGGCGATGCGAAGCCGGCTGACAGGATGTGGTGGCATCGCGCCGCCGGCC GGCGCTCTGGAGATCGCCGA
Downstream 100 bases:
>100_bases CGGCCCGCCGATCGTTGCGGAGCCGGCCGCCGGCCCGAATGAGGCTCACCTGGCCGCCCGCCCTCGCCCTGCTGGTCATG CTGGCGACGAACAGCCCTGC
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTSPTSPAASARLDSQLGLLLRYATLAPSSHNSQPWHFVLNDNTIALCADRMRALAVIDPYDRELIISCGAALLNLRVAL SRAGLAYTISPFPSEVDPDLLALVRVCNDGYIDTALAALADAIPKRVTTRAAFEPEAVPQALQQVLTSAVIAEGAGAVTV DSIAQRRQIAELVAEADHQQFRDPRFRRELASWIDPRRHLDGMPAFAAGVPSLLDFAAPLVTSAVRTFDLGNGLAALHHQ LVDASPLIVCITTANDDREAWLAAGQALERMLLAATDAGYTASYLNQPIETSGPRAALCRLLGLHGTPQLLLRIGRGPQL PHSPRRPLQDVVS
Sequences:
>Translated_333_residues MTSPTSPAASARLDSQLGLLLRYATLAPSSHNSQPWHFVLNDNTIALCADRMRALAVIDPYDRELIISCGAALLNLRVAL SRAGLAYTISPFPSEVDPDLLALVRVCNDGYIDTALAALADAIPKRVTTRAAFEPEAVPQALQQVLTSAVIAEGAGAVTV DSIAQRRQIAELVAEADHQQFRDPRFRRELASWIDPRRHLDGMPAFAAGVPSLLDFAAPLVTSAVRTFDLGNGLAALHHQ LVDASPLIVCITTANDDREAWLAAGQALERMLLAATDAGYTASYLNQPIETSGPRAALCRLLGLHGTPQLLLRIGRGPQL PHSPRRPLQDVVS >Mature_332_residues TSPTSPAASARLDSQLGLLLRYATLAPSSHNSQPWHFVLNDNTIALCADRMRALAVIDPYDRELIISCGAALLNLRVALS RAGLAYTISPFPSEVDPDLLALVRVCNDGYIDTALAALADAIPKRVTTRAAFEPEAVPQALQQVLTSAVIAEGAGAVTVD SIAQRRQIAELVAEADHQQFRDPRFRRELASWIDPRRHLDGMPAFAAGVPSLLDFAAPLVTSAVRTFDLGNGLAALHHQL VDASPLIVCITTANDDREAWLAAGQALERMLLAATDAGYTASYLNQPIETSGPRAALCRLLGLHGTPQLLLRIGRGPQLP HSPRRPLQDVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 35718; Mature: 35587
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTSPAASARLDSQLGLLLRYATLAPSSHNSQPWHFVLNDNTIALCADRMRALAVIDP CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEECC YDRELIISCGAALLNLRVALSRAGLAYTISPFPSEVDPDLLALVRVCNDGYIDTALAALA CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH DAIPKRVTTRAAFEPEAVPQALQQVLTSAVIAEGAGAVTVDSIAQRRQIAELVAEADHQQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH FRDPRFRRELASWIDPRRHLDGMPAFAAGVPSLLDFAAPLVTSAVRTFDLGNGLAALHHQ HCCHHHHHHHHHHHCHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LVDASPLIVCITTANDDREAWLAAGQALERMLLAATDAGYTASYLNQPIETSGPRAALCR HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHH LLGLHGTPQLLLRIGRGPQLPHSPRRPLQDVVS HHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure TSPTSPAASARLDSQLGLLLRYATLAPSSHNSQPWHFVLNDNTIALCADRMRALAVIDP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEECC YDRELIISCGAALLNLRVALSRAGLAYTISPFPSEVDPDLLALVRVCNDGYIDTALAALA CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH DAIPKRVTTRAAFEPEAVPQALQQVLTSAVIAEGAGAVTVDSIAQRRQIAELVAEADHQQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH FRDPRFRRELASWIDPRRHLDGMPAFAAGVPSLLDFAAPLVTSAVRTFDLGNGLAALHHQ HCCHHHHHHHHHHHCHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LVDASPLIVCITTANDDREAWLAAGQALERMLLAATDAGYTASYLNQPIETSGPRAALCR HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHH LLGLHGTPQLLLRIGRGPQLPHSPRRPLQDVVS HHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]