| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025360
Identifier: 238025360
GI number: 238025360
Start: 2523664
End: 2524494
Strand: Direct
Name: 238025360
Synonym: bglu_2g20360
Alternate gene names: NA
Gene position: 2523664-2524494 (Clockwise)
Preceding gene: 238025359
Following gene: 238025363
Centisome position: 89.26
GC content: 72.56
Gene sequence:
>831_bases ATGAGCTATCGAACCCTGATCGTCCATCTCGACGACAGCCAGCGCTGCCGCACCCGCACCGCGCTGGCCCTCGCGCTGAG CGCGCGCTGGAACGCCCATCTGATCGGCCTCTACGTGGTCTGCCAGGATCTGCTGGAGCCGCTGCGCCGGCCCGGCGAGC CGCTCGCACTCGGCGAGTACGAGCGCCTGGGCGAGCAGCGCCGCACGGCGGCCGAGCAGCGCTTCCTGGCGGCTGCCGAG GCCGCCGGACGCAGCGTGCAATGGCAGGCGCCCGCGGGCGACGCGGTGCGGACCGTGATCCGGCATGCGCACCATGCCGA CCTGATGCTGCTTGGACAGGAGGATCCGAACGACCGCCTGAGTCATGTCGCCGGCCATTTCGTCGAGGACGTGGTGATGG GTGCCGGGCGACCGATCCTGGTGCTGCCGCGCGCGGGCGCGGTCGCAAGCTGCGGCGAGAACGTGCTGGTGGGCTGGGAC GGCAAACGCGAAGCCGCCCGCGCGCTGGCCGACGCGCTGCCGCTGCTGGCGCACGCGCATCTGGTCAACGTGGTGACGGT CGAGCACGGCGGCACCGATCCCGACGCGCCGGCCGGCGTCGACGTGGCGGCCTACCTGGAGCGCCATCGGGTGCGCGCCG CCTTCTCGACCGTGCCGCGCGAGCGCGCGGCCGGCACCGGAGCGAGCTTGCTGGACCGCGCGGCCGAGTTGCATGCCGAC CTGATCGTGATGGGCCTGTACAGTCACGCCCGCAGGTACGAGCGCATCCTGGGCGGCGCCACGCGCACGGTCCTCGACAG GATGACGGTGCCCGTGCTGTTCTCGCACTGA
Upstream 100 bases:
>100_bases GGTCAGCGCGAGCGGCCCGGGCGGGCCGATGATGAACCGCGCCACGGCCACGCCGGGCAGCCGCCCGGCCGCGTCCGGCC TCGATCGACAAGGAGCCGTC
Downstream 100 bases:
>100_bases TCCGGCGCGCCGCCGGGGCCGCGCCCGCCGGCGTGCTCGGGATCTCGCCCGCCGCTCAGCGCGCCGGCAGCTCCCGCACC ACCAGCACCGGCCGGCCGGC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSYRTLIVHLDDSQRCRTRTALALALSARWNAHLIGLYVVCQDLLEPLRRPGEPLALGEYERLGEQRRTAAEQRFLAAAE AAGRSVQWQAPAGDAVRTVIRHAHHADLMLLGQEDPNDRLSHVAGHFVEDVVMGAGRPILVLPRAGAVASCGENVLVGWD GKREAARALADALPLLAHAHLVNVVTVEHGGTDPDAPAGVDVAAYLERHRVRAAFSTVPRERAAGTGASLLDRAAELHAD LIVMGLYSHARRYERILGGATRTVLDRMTVPVLFSH
Sequences:
>Translated_276_residues MSYRTLIVHLDDSQRCRTRTALALALSARWNAHLIGLYVVCQDLLEPLRRPGEPLALGEYERLGEQRRTAAEQRFLAAAE AAGRSVQWQAPAGDAVRTVIRHAHHADLMLLGQEDPNDRLSHVAGHFVEDVVMGAGRPILVLPRAGAVASCGENVLVGWD GKREAARALADALPLLAHAHLVNVVTVEHGGTDPDAPAGVDVAAYLERHRVRAAFSTVPRERAAGTGASLLDRAAELHAD LIVMGLYSHARRYERILGGATRTVLDRMTVPVLFSH >Mature_275_residues SYRTLIVHLDDSQRCRTRTALALALSARWNAHLIGLYVVCQDLLEPLRRPGEPLALGEYERLGEQRRTAAEQRFLAAAEA AGRSVQWQAPAGDAVRTVIRHAHHADLMLLGQEDPNDRLSHVAGHFVEDVVMGAGRPILVLPRAGAVASCGENVLVGWDG KREAARALADALPLLAHAHLVNVVTVEHGGTDPDAPAGVDVAAYLERHRVRAAFSTVPRERAAGTGASLLDRAAELHADL IVMGLYSHARRYERILGGATRTVLDRMTVPVLFSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29954; Mature: 29822
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRTLIVHLDDSQRCRTRTALALALSARWNAHLIGLYVVCQDLLEPLRRPGEPLALGEY CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH ERLGEQRRTAAEQRFLAAAEAAGRSVQWQAPAGDAVRTVIRHAHHADLMLLGQEDPNDRL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHH SHVAGHFVEDVVMGAGRPILVLPRAGAVASCGENVLVGWDGKREAARALADALPLLAHAH HHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH LVNVVTVEHGGTDPDAPAGVDVAAYLERHRVRAAFSTVPRERAAGTGASLLDRAAELHAD HHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH LIVMGLYSHARRYERILGGATRTVLDRMTVPVLFSH HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECC >Mature Secondary Structure SYRTLIVHLDDSQRCRTRTALALALSARWNAHLIGLYVVCQDLLEPLRRPGEPLALGEY CCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH ERLGEQRRTAAEQRFLAAAEAAGRSVQWQAPAGDAVRTVIRHAHHADLMLLGQEDPNDRL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHH SHVAGHFVEDVVMGAGRPILVLPRAGAVASCGENVLVGWDGKREAARALADALPLLAHAH HHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH LVNVVTVEHGGTDPDAPAGVDVAAYLERHRVRAAFSTVPRERAAGTGASLLDRAAELHAD HHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH LIVMGLYSHARRYERILGGATRTVLDRMTVPVLFSH HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA