| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025340
Identifier: 238025340
GI number: 238025340
Start: 2501927
End: 2502364
Strand: Direct
Name: 238025340
Synonym: bglu_2g20140
Alternate gene names: NA
Gene position: 2501927-2502364 (Clockwise)
Preceding gene: 238025332
Following gene: 238025342
Centisome position: 88.49
GC content: 56.39
Gene sequence:
>438_bases ATGGAGATCCCGATGACCAAGAAATGCTACTCGACGGTAATTACGGTTAAATACCGGGAAACCGACGGACTCGGGCACGT CAGCAGCCCGGTTTATTACGACTACCTGCAGCATGCCTATCTGACGTTCATGCATGATTTGCTGGAATTGCCTTATTCGG AGAAGTTACCGCACGTCATGGTCAAGACGTCGTGCGAGTATCTGAAGCCCGCTCATTACGGGGATACCATTACGGTGCGC AGCAGCATCACCCGGTTCGGATCGAAAAGCTTCGAGCTCGAACACCTGATGACGCGGGACAACGGCTCGGCCGGAGACGA CGCGATCGTTGCCCGCGCGCTGTCGACCCATGTGATGTTCGACTACGCGCGCAATGCGACGATGCAGGTTCCCGAAGAAT TCAAGGCGCGGGTTCTGGCGTTCCAGGGCGCCATCTGA
Upstream 100 bases:
>100_bases CCGCCGCCCCGGCCCGCCGATCTGCCAGTTTTTACAGTAGCCGGAATTATTAATTCAATATATTTTCACCTGGAGAAAAT GCGCCGCCGGCGCCTCGCAC
Downstream 100 bases:
>100_bases CAAGCGGATTGCCGGGGCGGGCGCCCCGGATCCCTCCTATGCGAATACGATCAAGCCCATCAGCACGGCCTTCACGACCG CATTTGTCCGGTTCGAGGCG
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MEIPMTKKCYSTVITVKYRETDGLGHVSSPVYYDYLQHAYLTFMHDLLELPYSEKLPHVMVKTSCEYLKPAHYGDTITVR SSITRFGSKSFELEHLMTRDNGSAGDDAIVARALSTHVMFDYARNATMQVPEEFKARVLAFQGAI
Sequences:
>Translated_145_residues MEIPMTKKCYSTVITVKYRETDGLGHVSSPVYYDYLQHAYLTFMHDLLELPYSEKLPHVMVKTSCEYLKPAHYGDTITVR SSITRFGSKSFELEHLMTRDNGSAGDDAIVARALSTHVMFDYARNATMQVPEEFKARVLAFQGAI >Mature_145_residues MEIPMTKKCYSTVITVKYRETDGLGHVSSPVYYDYLQHAYLTFMHDLLELPYSEKLPHVMVKTSCEYLKPAHYGDTITVR SSITRFGSKSFELEHLMTRDNGSAGDDAIVARALSTHVMFDYARNATMQVPEEFKARVLAFQGAI
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16494; Mature: 16494
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPMTKKCYSTVITVKYRETDGLGHVSSPVYYDYLQHAYLTFMHDLLELPYSEKLPHVM CCCCCCHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VKTSCEYLKPAHYGDTITVRSSITRFGSKSFELEHLMTRDNGSAGDDAIVARALSTHVMF HHHCHHHCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DYARNATMQVPEEFKARVLAFQGAI HHHCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MEIPMTKKCYSTVITVKYRETDGLGHVSSPVYYDYLQHAYLTFMHDLLELPYSEKLPHVM CCCCCCHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VKTSCEYLKPAHYGDTITVRSSITRFGSKSFELEHLMTRDNGSAGDDAIVARALSTHVMF HHHCHHHCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DYARNATMQVPEEFKARVLAFQGAI HHHCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA