| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fusA [H]
Identifier: 238025329
GI number: 238025329
Start: 2490671
End: 2492119
Strand: Direct
Name: fusA [H]
Synonym: bglu_2g20030
Alternate gene names: 238025329
Gene position: 2490671-2492119 (Clockwise)
Preceding gene: 238025328
Following gene: 238025330
Centisome position: 88.09
GC content: 72.74
Gene sequence:
>1449_bases ATGTCCAAGTTCCTTGCTTCGATTCGAATATGGGGTCCGGTTGTTTCAGCGACCGTCGCGGCGGCCGTCATGGCCGGTTG CGCGCCGTTCGGCCAGCAGCCGGCGCGGCAGGCGATCACCCCGCTGGCGCAGTTCGATCCGGGCCTCGCGCTGCGCTCGG CCAGGGGCCGGGCCGACGTGGACGCGCACTGGTGGCGCGCGTTCGGCGACCCGCAGCTCGACCGCGTGCTGGCCGACGCG CTGGCCGACGCGCCGTCGTTGAAGGCGCAGCGCGCCCGCGTGGACGAAGCGCTCGCGCAAGCCGACGTCAGCGCGGCGGC TTCGCTGCCGCGGCTCGGCGCCTCGGCCAGCGCACTGCCGCAGCGGCTGCCGCGCAGCTACAACGTGCCGCCGCCCGCCG CCGGCCACTGGCAAGTCAACGCGCAAGCGCTGCTGAATGCGTCGTTCGATCTCGACGTTGCCGGGCGCCTGCGCGCCCTG ACCCGCGCCGCCACACTGCGCGCCGACCAGCAGCAGGCGCTCGAACGCGCGGCCACCGTGTCGTTGCAGGCCGCGCTGGT CGAAACCTATCTGCAGCTCGCGCTCGAGCTGCAACTGCTGGAGATTGCGCAGGATACGCTGCGGCAGCAGGACTATCTGC TGCGCCTCACCCGCCAGCGCGCCGCCGCGGGACTCGACATGCCGGCAGCGGTCGCGCGTGCCGGCGAGCCGCTGCCGCTC GCCGCGGCCGAGGTCGAGCGGCAGCACGCGGCCGTCGCCCTGCTGCGCCACCGGCTCGCCGCGCTCGTCGGACGCGGGCC CGGCTATGCGGATACGCTCACCCCAGCGCCGGGCGTGCTGCGCGCGCTGGCGCCCTTGCCCGCGACGCTGCCGGCCGCGC TCGTCGGCCGCCGGCCCGACATCCTGGCGGCCCGCTACCGGGTCGAGGCCGAGTCGGCCGGCATCGATGCCGCCCGCGCG TCGTTCTACCCGGACATCAACCTGCTGGCGTTTGCCGGCGTGCAGAGCTTTGGCTTTCGCGCGCTGCTTCACGGCAGCAG CGGAGCGTTCGGCGCAGGCCCCGCCATCACGCTGCCGATCTTCGAAGGCGGCCGGCTGCGTGCCGGCCTGCGCGCGCAGA CCGACGCCTACAACGCCGCCGTCGCCGACTACGACGACACCGTGGTCCATGCACTCGCGCAAGTCAGCGACTCGCTCGTC CAGCTCGACTCGCTGGCCCGGCAGCGCGACCTGACTGTCGAGGCACTGGCGCGCGCGCAGTCGACCTACGAGATCGAAAC ACGGCGATACCAAAAAGGCATTTCCGGCTACCTGGACGTGCTGCTGGCTGAAACGCGGCTGCTCGAAGACCGCCGATCGG TCGCTCGCGCCGACACCTCACTTGCCGTCGAACACGTCCGGCTGATCGCCGCGCTCGGTGGCGCAACCAACCCAGGAGCC CAGCCATGA
Upstream 100 bases:
>100_bases CCGGCACTGGCATTTCTGCCAGTTGCTGCTTGTTCAAGAATATCTAAAGATATATTTTTAGATAGGTTGCATTCGCCAAT CGGACTCGTGGAAACCGATC
Downstream 100 bases:
>100_bases ACCGCACCGACAATCCGCAGGCTGCCGCGGGCGCGGCCGCACCCCCGCCCGCCGAACCCGCGCTGCCCGACAGGCGCCGC CGCTACTTCCGCTGGTTCTT
Product: RND efflux system outer membrane lipoprotein NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MSKFLASIRIWGPVVSATVAAAVMAGCAPFGQQPARQAITPLAQFDPGLALRSARGRADVDAHWWRAFGDPQLDRVLADA LADAPSLKAQRARVDEALAQADVSAAASLPRLGASASALPQRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRAL TRAATLRADQQQALERAATVSLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRAAAGLDMPAAVARAGEPLPL AAAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLRALAPLPATLPAALVGRRPDILAARYRVEAESAGIDAARA SFYPDINLLAFAGVQSFGFRALLHGSSGAFGAGPAITLPIFEGGRLRAGLRAQTDAYNAAVADYDDTVVHALAQVSDSLV QLDSLARQRDLTVEALARAQSTYEIETRRYQKGISGYLDVLLAETRLLEDRRSVARADTSLAVEHVRLIAALGGATNPGA QP
Sequences:
>Translated_482_residues MSKFLASIRIWGPVVSATVAAAVMAGCAPFGQQPARQAITPLAQFDPGLALRSARGRADVDAHWWRAFGDPQLDRVLADA LADAPSLKAQRARVDEALAQADVSAAASLPRLGASASALPQRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRAL TRAATLRADQQQALERAATVSLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRAAAGLDMPAAVARAGEPLPL AAAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLRALAPLPATLPAALVGRRPDILAARYRVEAESAGIDAARA SFYPDINLLAFAGVQSFGFRALLHGSSGAFGAGPAITLPIFEGGRLRAGLRAQTDAYNAAVADYDDTVVHALAQVSDSLV QLDSLARQRDLTVEALARAQSTYEIETRRYQKGISGYLDVLLAETRLLEDRRSVARADTSLAVEHVRLIAALGGATNPGA QP >Mature_481_residues SKFLASIRIWGPVVSATVAAAVMAGCAPFGQQPARQAITPLAQFDPGLALRSARGRADVDAHWWRAFGDPQLDRVLADAL ADAPSLKAQRARVDEALAQADVSAAASLPRLGASASALPQRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRALT RAATLRADQQQALERAATVSLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRAAAGLDMPAAVARAGEPLPLA AAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLRALAPLPATLPAALVGRRPDILAARYRVEAESAGIDAARAS FYPDINLLAFAGVQSFGFRALLHGSSGAFGAGPAITLPIFEGGRLRAGLRAQTDAYNAAVADYDDTVVHALAQVSDSLVQ LDSLARQRDLTVEALARAQSTYEIETRRYQKGISGYLDVLLAETRLLEDRRSVARADTSLAVEHVRLIAALGGATNPGAQ P
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=432, Percent_Identity=28.4722222222222, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI1786785, Length=414, Percent_Identity=28.0193236714976, Blast_Score=138, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 50999; Mature: 50867
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFLASIRIWGPVVSATVAAAVMAGCAPFGQQPARQAITPLAQFDPGLALRSARGRADV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCCHHHHCCCCCCCC DAHWWRAFGDPQLDRVLADALADAPSLKAQRARVDEALAQADVSAAASLPRLGASASALP CHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH QRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRALTRAATLRADQQQALERAATV HHCCCCCCCCCCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRAAAGLDMPAAVARAGEPLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC AAAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLRALAPLPATLPAALVGRRPD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCC ILAARYRVEAESAGIDAARASFYPDINLLAFAGVQSFGFRALLHGSSGAFGAGPAITLPI HHHHHHEECHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEE FEGGRLRAGLRAQTDAYNAAVADYDDTVVHALAQVSDSLVQLDSLARQRDLTVEALARAQ ECCCCCCCCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH STYEIETRRYQKGISGYLDVLLAETRLLEDRRSVARADTSLAVEHVRLIAALGGATNPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QP CC >Mature Secondary Structure SKFLASIRIWGPVVSATVAAAVMAGCAPFGQQPARQAITPLAQFDPGLALRSARGRADV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCCHHHHCCCCCCCC DAHWWRAFGDPQLDRVLADALADAPSLKAQRARVDEALAQADVSAAASLPRLGASASALP CHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH QRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRALTRAATLRADQQQALERAATV HHCCCCCCCCCCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRAAAGLDMPAAVARAGEPLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC AAAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLRALAPLPATLPAALVGRRPD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCC ILAARYRVEAESAGIDAARASFYPDINLLAFAGVQSFGFRALLHGSSGAFGAGPAITLPI HHHHHHEECHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEE FEGGRLRAGLRAQTDAYNAAVADYDDTVVHALAQVSDSLVQLDSLARQRDLTVEALARAQ ECCCCCCCCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH STYEIETRRYQKGISGYLDVLLAETRLLEDRRSVARADTSLAVEHVRLIAALGGATNPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]