| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is aroK [H]
Identifier: 238025328
GI number: 238025328
Start: 2490027
End: 2490512
Strand: Direct
Name: aroK [H]
Synonym: bglu_2g20020
Alternate gene names: 238025328
Gene position: 2490027-2490512 (Clockwise)
Preceding gene: 238025327
Following gene: 238025329
Centisome position: 88.07
GC content: 72.02
Gene sequence:
>486_bases TTGATCGGCATGCCCGGCGCGGGCAAGACGACCGTCGGCGCGGCGCTGGCGGCGGCACTCGGCCGGCCGTTCGCGGATTC GGACCGGGAGCTCGAGCAGCGCTTCGGCGCCCCGCTTTCCACGCTGTTTCCGATGCCGACGTTCCGCGCCCGCGAAGCCG ACGTGATCGACGCCCTGTCGCGGCGCGACACGCTGGTACTCGCCACCGGCGGCGGCGCGGTGCTGCGCGACGACACCCGC GCGCGCCTCAAGGCGCGCTGCCACGTGATCTATCTGATCAGCGACATCGACGCGCTGTATCGGCGCACCCGCCGCCATTC GGCGCGCCCGCTCCTGAACGTGCCCGATCCGCGCGCCATGCTGAGCGAGTTGCAGCGGACCCGCGATCCGCTGTATCGGG CCTGCGCGCACCGCCTGCTCGACACGCGCGACGCATCGATCGAAGAAATCGTCGCGGCCGCCCTCACCGAGCCTGCCCAT TCCTGA
Upstream 100 bases:
>100_bases TCGCCAAGACGGTGCGCCTGCGCCGCATCACGGCGGCGACGCGCCGGACCGATTCGCTGCGGAGCCGGCTGTGAGGGCAG GGCGCCATCCGAGAATCGCC
Downstream 100 bases:
>100_bases CGGCCGCGCGTGCGCTTCCCCGCGCCGCGCCCGGCTTCGCCCCGCCCCGTCCGAAACCCCGGCACTGGCATTTCTGCCAG TTGCTGCTTGTTCAAGAATA
Product: Shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIGMPGAGKTTVGAALAAALGRPFADSDRELEQRFGAPLSTLFPMPTFRAREADVIDALSRRDTLVLATGGGAVLRDDTR ARLKARCHVIYLISDIDALYRRTRRHSARPLLNVPDPRAMLSELQRTRDPLYRACAHRLLDTRDASIEEIVAAALTEPAH S
Sequences:
>Translated_161_residues MIGMPGAGKTTVGAALAAALGRPFADSDRELEQRFGAPLSTLFPMPTFRAREADVIDALSRRDTLVLATGGGAVLRDDTR ARLKARCHVIYLISDIDALYRRTRRHSARPLLNVPDPRAMLSELQRTRDPLYRACAHRLLDTRDASIEEIVAAALTEPAH S >Mature_161_residues MIGMPGAGKTTVGAALAAALGRPFADSDRELEQRFGAPLSTLFPMPTFRAREADVIDALSRRDTLVLATGGGAVLRDDTR ARLKARCHVIYLISDIDALYRRTRRHSARPLLNVPDPRAMLSELQRTRDPLYRACAHRLLDTRDASIEEIVAAALTEPAH S
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=150, Percent_Identity=43.3333333333333, Blast_Score=114, Evalue=3e-27, Organism=Escherichia coli, GI1786587, Length=150, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 17659; Mature: 17659
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGMPGAGKTTVGAALAAALGRPFADSDRELEQRFGAPLSTLFPMPTFRAREADVIDALS CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH RRDTLVLATGGGAVLRDDTRARLKARCHVIYLISDIDALYRRTRRHSARPLLNVPDPRAM CCCEEEEEECCCCEEECHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LSELQRTRDPLYRACAHRLLDTRDASIEEIVAAALTEPAHS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MIGMPGAGKTTVGAALAAALGRPFADSDRELEQRFGAPLSTLFPMPTFRAREADVIDALS CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH RRDTLVLATGGGAVLRDDTRARLKARCHVIYLISDIDALYRRTRRHSARPLLNVPDPRAM CCCEEEEEECCCCEEECHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LSELQRTRDPLYRACAHRLLDTRDASIEEIVAAALTEPAHS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA