| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025325
Identifier: 238025325
GI number: 238025325
Start: 2486728
End: 2487132
Strand: Direct
Name: 238025325
Synonym: bglu_2g19990
Alternate gene names: NA
Gene position: 2486728-2487132 (Clockwise)
Preceding gene: 238025324
Following gene: 238025326
Centisome position: 87.95
GC content: 64.94
Gene sequence:
>405_bases GTGTCCATCCAGCCCGGCCTTTGTGCCCGCGCCACGCATCGCGTCGATACGATCTCGCTTGCCGATCAGTGGGGCGGCGA AGCGCACGCGCTGGCCAGCCCGATCATGATCATCTTCATCGAGCAGACCTGCATGCAGGCAACGGACCACCTGCTCGGCG CCGACCTGATGACGGTCGGCTATCACTTCGAGATCAAGCATCTCGCGCCCACGCCGCCCGACTGGGAGGTCACGGTCGAC GCCGAGCTGATCTCGGTGGATGGTCGCATGATGACCTACAAGGTATCGGTTAGCGATGCGGCTGGCGTAGTCGGCGAAGG CACCCATACACGCTGCGCGGTCGGCCGCGACAGTTTTCACGAGCGGCTTGCCGAACGCCGTGACAGCGCGCCGGTCGCAC CATGA
Upstream 100 bases:
>100_bases CGCACGCAACATCTTCAGCCAGTTGCAGCGCCGCGCCAGCGCCGCGCACAAGCAAGCCGCCTGAGCGCTCATTTTCTCTC TCGTCCCGAAGGAGTCTGCC
Downstream 100 bases:
>100_bases GCGCCGCGGGAGGAGGCACGCCGATGCGCTCGCTGCCGCTGCAGGGTCTGCGCCTGCCGCTCATCGCGTCACCCATGTTG ATCGCCAGCTACCCCGAGAT
Product: thioesterase family protein
Products: NA
Alternate protein names: Thioesterase Superfamily Protein; Thioesterase Superfamily; Thioesterase; Thioesterase/Thiol Ester Dehydrase-Isomerase
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVD AELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP
Sequences:
>Translated_134_residues MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVD AELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP >Mature_133_residues SIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVDA ELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP
Specific function: Unknown
COG id: COG5496
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14527; Mature: 14395
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVG CCCCCCCCCHHHCCCEEEEEHHHCCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEEE YHFEIKHLAPTPPDWEVTVDAELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFH EEEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHH ERLAERRDSAPVAP HHHHHHCCCCCCCC >Mature Secondary Structure SIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVG CCCCCCCCHHHCCCEEEEEHHHCCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEEE YHFEIKHLAPTPPDWEVTVDAELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFH EEEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHH ERLAERRDSAPVAP HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA