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The map label for this gene is yngJ [H]

Identifier: 238025324

GI number: 238025324

Start: 2485540

End: 2486691

Strand: Direct

Name: yngJ [H]

Synonym: bglu_2g19980

Alternate gene names: 238025324

Gene position: 2485540-2486691 (Clockwise)

Preceding gene: 238025323

Following gene: 238025325

Centisome position: 87.91

GC content: 69.1

Gene sequence:

>1152_bases
ATGAACTTCGAATTCACGCCCGATCAACACGCTGCTGCCGCGACCTATCGCGCCATCGCGCTGCGTCACGTCGCGTCGTC
ACCGCGTCGCGGATTCGACTGGGCAAGCTGGCGGGCGCTATCCGAGGCAGGTTTGTGGCGCACGCTGGGCGCCGACCGCG
ACGCCGGCCCGGACACCGCGTCGAATGGGTTCATCGCCGCGTTCGAGGCGATCGTTGCAACGACGAGATCGATCGGTTTT
GCGATGGCGCTCGCGAATCAGGCCACCGTGATCCGCGCCCTGCTGCGCCACGGCACACCGGCTCAGCGCGAGCGCCTGCT
GCCGGCGCTGATGGCCGGCGCGGTGGCCGCCACGGCGATCTCGGAGAAAGGCACCGGCACCGAAATCCGCGCCCTGCAGA
CTCGCGTCACGCCGGACGGCCAGGCGCTGCGGCTGGACGGCCACAAGTACAACATCAGCCACGCCCCCGACGCGGCACTC
GTCCTCGTCGCCGCGAGCACCACGCAGGACGGTCGCCCCGGCACGGCGCTGGTTCTTCTCGATCCGCAACGCAGCGGCGT
GACACGCAGCGATCCTCAGGACACCCTCGGTGTCGCCGATCTGCCGATCGGCGACATGAACTTCAACGGCGTCGCGCTCG
GAACCGACGACTTGCTTTGCAGCCCGAAGGACGGGCTGCCTGTCCTGATGGACATCGCTTCGATGAACCGGGCGCTGTTC
GGCCTGCTGTGCGCGGACGTGGTCGGGCCGTTCCTCGACGACGCGCTCGCCTACGTTCGCGAACGCGGCGCGCTCGGCGT
GACGCTCGACACGCATCAGCACGTCCAGCGGCGGCTCGTCGACATCCACGTCGGTTCGGAACGCTCGCGCTGGATGGCAC
TCGCCGCGCTCGACCAGTTGCGAGCCGGCACCCCGTCTGCGCTTGCGAGCTGCTCGGTGGCGAAACTGGGCGGTGCCCGC
GACCTGATCCAGGCCGCGTTGCACCTGCTTGCGATCTACGGCAGCGACGGCTATCGCCGCGGCCCGCTCTCGACTTTCGT
TGCCGACGCGCTCGCGATGGGAACCGCGGGCGGCACCGAAGAAATGCACGCACGCAACATCTTCAGCCAGTTGCAGCGCC
GCGCCAGCGCCGCGCACAAGCAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GTGGCGCCCCCACCGCGACGATTGCGAAAACTGACAGTTTCTCCGTCCCGATGTTTTGGATAGATTGGACACACCCCATC
CGCATCGCATCAGGGACGCC

Downstream 100 bases:

>100_bases
GCGCTCATTTTCTCTCTCGTCCCGAAGGAGTCTGCCGTGTCCATCCAGCCCGGCCTTTGTGCCCGCGCCACGCATCGCGT
CGATACGATCTCGCTTGCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNFEFTPDQHAAAATYRAIALRHVASSPRRGFDWASWRALSEAGLWRTLGADRDAGPDTASNGFIAAFEAIVATTRSIGF
AMALANQATVIRALLRHGTPAQRERLLPALMAGAVAATAISEKGTGTEIRALQTRVTPDGQALRLDGHKYNISHAPDAAL
VLVAASTTQDGRPGTALVLLDPQRSGVTRSDPQDTLGVADLPIGDMNFNGVALGTDDLLCSPKDGLPVLMDIASMNRALF
GLLCADVVGPFLDDALAYVRERGALGVTLDTHQHVQRRLVDIHVGSERSRWMALAALDQLRAGTPSALASCSVAKLGGAR
DLIQAALHLLAIYGSDGYRRGPLSTFVADALAMGTAGGTEEMHARNIFSQLQRRASAAHKQAA

Sequences:

>Translated_383_residues
MNFEFTPDQHAAAATYRAIALRHVASSPRRGFDWASWRALSEAGLWRTLGADRDAGPDTASNGFIAAFEAIVATTRSIGF
AMALANQATVIRALLRHGTPAQRERLLPALMAGAVAATAISEKGTGTEIRALQTRVTPDGQALRLDGHKYNISHAPDAAL
VLVAASTTQDGRPGTALVLLDPQRSGVTRSDPQDTLGVADLPIGDMNFNGVALGTDDLLCSPKDGLPVLMDIASMNRALF
GLLCADVVGPFLDDALAYVRERGALGVTLDTHQHVQRRLVDIHVGSERSRWMALAALDQLRAGTPSALASCSVAKLGGAR
DLIQAALHLLAIYGSDGYRRGPLSTFVADALAMGTAGGTEEMHARNIFSQLQRRASAAHKQAA
>Mature_383_residues
MNFEFTPDQHAAAATYRAIALRHVASSPRRGFDWASWRALSEAGLWRTLGADRDAGPDTASNGFIAAFEAIVATTRSIGF
AMALANQATVIRALLRHGTPAQRERLLPALMAGAVAATAISEKGTGTEIRALQTRVTPDGQALRLDGHKYNISHAPDAAL
VLVAASTTQDGRPGTALVLLDPQRSGVTRSDPQDTLGVADLPIGDMNFNGVALGTDDLLCSPKDGLPVLMDIASMNRALF
GLLCADVVGPFLDDALAYVRERGALGVTLDTHQHVQRRLVDIHVGSERSRWMALAALDQLRAGTPSALASCSVAKLGGAR
DLIQAALHLLAIYGSDGYRRGPLSTFVADALAMGTAGGTEEMHARNIFSQLQRRASAAHKQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958414, Length=348, Percent_Identity=22.9885057471264, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI226958412, Length=331, Percent_Identity=23.2628398791541, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4501859, Length=270, Percent_Identity=28.1481481481481, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI4501857, Length=289, Percent_Identity=23.1833910034602, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI4557233, Length=313, Percent_Identity=24.2811501597444, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI76496475, Length=322, Percent_Identity=22.6708074534161, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4557235, Length=322, Percent_Identity=22.6708074534161, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI21361497, Length=314, Percent_Identity=23.5668789808917, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17538396, Length=332, Percent_Identity=24.0963855421687, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=394, Percent_Identity=25.6345177664975, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=347, Percent_Identity=23.342939481268, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=396, Percent_Identity=22.2222222222222, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=328, Percent_Identity=21.9512195121951, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=265, Percent_Identity=23.0188679245283, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71985184, Length=277, Percent_Identity=25.6317689530686, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=212, Percent_Identity=25.9433962264151, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71985192, Length=240, Percent_Identity=25.8333333333333, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=279, Percent_Identity=21.1469534050179, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=291, Percent_Identity=26.8041237113402, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355753, Length=343, Percent_Identity=24.4897959183673, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281363737, Length=266, Percent_Identity=24.812030075188, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24660351, Length=297, Percent_Identity=25.5892255892256, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24652780, Length=311, Percent_Identity=25.08038585209, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666513, Length=289, Percent_Identity=22.4913494809689, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356377, Length=280, Percent_Identity=23.9285714285714, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40455; Mature: 40455

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEFTPDQHAAAATYRAIALRHVASSPRRGFDWASWRALSEAGLWRTLGADRDAGPDTA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCC
SNGFIAAFEAIVATTRSIGFAMALANQATVIRALLRHGTPAQRERLLPALMAGAVAATAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SEKGTGTEIRALQTRVTPDGQALRLDGHKYNISHAPDAALVLVAASTTQDGRPGTALVLL
HCCCCCCEEHEEEEECCCCCCEEEECCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEE
DPQRSGVTRSDPQDTLGVADLPIGDMNFNGVALGTDDLLCSPKDGLPVLMDIASMNRALF
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHH
GLLCADVVGPFLDDALAYVRERGALGVTLDTHQHVQRRLVDIHVGSERSRWMALAALDQL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
RAGTPSALASCSVAKLGGARDLIQAALHLLAIYGSDGYRRGPLSTFVADALAMGTAGGTE
HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH
EMHARNIFSQLQRRASAAHKQAA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFEFTPDQHAAAATYRAIALRHVASSPRRGFDWASWRALSEAGLWRTLGADRDAGPDTA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCC
SNGFIAAFEAIVATTRSIGFAMALANQATVIRALLRHGTPAQRERLLPALMAGAVAATAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SEKGTGTEIRALQTRVTPDGQALRLDGHKYNISHAPDAALVLVAASTTQDGRPGTALVLL
HCCCCCCEEHEEEEECCCCCCEEEECCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEE
DPQRSGVTRSDPQDTLGVADLPIGDMNFNGVALGTDDLLCSPKDGLPVLMDIASMNRALF
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHH
GLLCADVVGPFLDDALAYVRERGALGVTLDTHQHVQRRLVDIHVGSERSRWMALAALDQL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
RAGTPSALASCSVAKLGGARDLIQAALHLLAIYGSDGYRRGPLSTFVADALAMGTAGGTE
HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH
EMHARNIFSQLQRRASAAHKQAA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]