| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025290
Identifier: 238025290
GI number: 238025290
Start: 2439569
End: 2440771
Strand: Direct
Name: 238025290
Synonym: bglu_2g19640
Alternate gene names: NA
Gene position: 2439569-2440771 (Clockwise)
Preceding gene: 238025289
Following gene: 238025295
Centisome position: 86.29
GC content: 66.5
Gene sequence:
>1203_bases ATGATCATCAAACCGCGCGTGCGTGGCTTCATCTGCGTGACCACTCACCCCGTCGGCTGCGAAGCCAACGTCAAAGAACA AATCGACTACGTGGTCAAGCAAGGCCCGATCGCCGACGGTCCGAAGAAGGTGCTGGTGATCGGCTCGTCGACGGGCTACG GCCTTGCCGCGCGCATCTCGGCGGCGTTCGCCTCGGGCGCGGACACGCTCGGCGTGTGCTTCGAGCGCGCCGGCAGCGAC AGCAAGCCGGGCACGGCCGGCTGGTACAACACGGCGGCGTTCGAGAAATTCGCCAAGGCCGAGGGCCGCTATGCGAGGAC GATCAATGGAGACGCGTTCTCCGACGAAGTGAAGCGCGTCACGCTCGAGACCATCAAGGCCGACCTCGGCCAGGTGGATC TGGTGGTCTACAGCCTGGCCTCGCCGCGCCGCACGCATCCGAAGACGGGCGTGGTGCATCAGTCCACGCTCAAGCCGATC GGCAAGACGGTGCAGTTCCGCGGCCTCGACACCGACCGCGAAGTGATCCGCGAGACGGTGCTGGAGCCGGCCACGCAGGA GGAAGTCGACAACACGGTGGCCGTGATGGGCGGCGAGGACTGGAAGATGTGGGTGGACGCGCTGCGCGAGGCCGGCCTGC TGGCCGAGGGCGCGAAGACCACGGCGTTCACCTATCTCGGCGAGCAGATCACGCACGACATCTACTGGAACGGCTCGATC GGCGCGGCCAAGAAGGACCTCGACCGCACCGTGATCGGCCTGCGCGAGTCGCTCGCGCCGCTCGGCGGCGACGCACGCGT GTCGGTGCTGAAGGCGGTGGTCACGCAGGCCAGCTCGGCGATCCCGATGATGCCGCTGTACCTGTCGCTGCTGTTCAAGG TGATGAAGGAAACCGGCACCCACGAGGGCTGCATCGAACAGGTGTACGGGCTGCTGCACGACACCCTGTACGGCACCACC CCGCACATCGACGAGGACGGCCGCCTGCGCGCCGACTACAAGGAGCTGGCCCCGGAAGTGCAGGCCAAAGTGGCGGCGCT GTGGGGCCACGTCACCAACGAGAACCTCTACGAGCTGACCGACTTCGCCGGCTACAAGCACGAGTTCCTGCGCCTGTTCG GCTTCGAGATCGCGGGCGTGGACTACGACGCCGACGTCAATCCCGACGTGCCGATTCCGGGCCTGATCCAGGTCGGCATG TAA
Upstream 100 bases:
>100_bases ATGAATCGGCCGCGATCGCGCGCGGCGGCGCGGGGCATCCATTACAATGCACGGCGTTTACGTTCGTCGAACTACGACTT CCCCGCATTCAGAGGCTTTC
Downstream 100 bases:
>100_bases GGCCGCCGCGCGGCAGACGCCGCGCGGAGCAGACCTGAAACAGCATGGAAACAAGCGGCGCCGGCCTTCACCGGCGCCGC TTTTTGGTTCACGCGCGCCG
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MIIKPRVRGFICVTTHPVGCEANVKEQIDYVVKQGPIADGPKKVLVIGSSTGYGLAARISAAFASGADTLGVCFERAGSD SKPGTAGWYNTAAFEKFAKAEGRYARTINGDAFSDEVKRVTLETIKADLGQVDLVVYSLASPRRTHPKTGVVHQSTLKPI GKTVQFRGLDTDREVIRETVLEPATQEEVDNTVAVMGGEDWKMWVDALREAGLLAEGAKTTAFTYLGEQITHDIYWNGSI GAAKKDLDRTVIGLRESLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKETGTHEGCIEQVYGLLHDTLYGTT PHIDEDGRLRADYKELAPEVQAKVAALWGHVTNENLYELTDFAGYKHEFLRLFGFEIAGVDYDADVNPDVPIPGLIQVGM
Sequences:
>Translated_400_residues MIIKPRVRGFICVTTHPVGCEANVKEQIDYVVKQGPIADGPKKVLVIGSSTGYGLAARISAAFASGADTLGVCFERAGSD SKPGTAGWYNTAAFEKFAKAEGRYARTINGDAFSDEVKRVTLETIKADLGQVDLVVYSLASPRRTHPKTGVVHQSTLKPI GKTVQFRGLDTDREVIRETVLEPATQEEVDNTVAVMGGEDWKMWVDALREAGLLAEGAKTTAFTYLGEQITHDIYWNGSI GAAKKDLDRTVIGLRESLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKETGTHEGCIEQVYGLLHDTLYGTT PHIDEDGRLRADYKELAPEVQAKVAALWGHVTNENLYELTDFAGYKHEFLRLFGFEIAGVDYDADVNPDVPIPGLIQVGM >Mature_400_residues MIIKPRVRGFICVTTHPVGCEANVKEQIDYVVKQGPIADGPKKVLVIGSSTGYGLAARISAAFASGADTLGVCFERAGSD SKPGTAGWYNTAAFEKFAKAEGRYARTINGDAFSDEVKRVTLETIKADLGQVDLVVYSLASPRRTHPKTGVVHQSTLKPI GKTVQFRGLDTDREVIRETVLEPATQEEVDNTVAVMGGEDWKMWVDALREAGLLAEGAKTTAFTYLGEQITHDIYWNGSI GAAKKDLDRTVIGLRESLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKETGTHEGCIEQVYGLLHDTLYGTT PHIDEDGRLRADYKELAPEVQAKVAALWGHVTNENLYELTDFAGYKHEFLRLFGFEIAGVDYDADVNPDVPIPGLIQVGM
Specific function: Probable reductase [H]
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010758 [H]
Pfam domain/function: PF07055 scADH [H]
EC number: NA
Molecular weight: Translated: 43466; Mature: 43466
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKPRVRGFICVTTHPVGCEANVKEQIDYVVKQGPIADGPKKVLVIGSSTGYGLAARIS CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH AAFASGADTLGVCFERAGSDSKPGTAGWYNTAAFEKFAKAEGRYARTINGDAFSDEVKRV HHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TLETIKADLGQVDLVVYSLASPRRTHPKTGVVHQSTLKPIGKTVQFRGLDTDREVIRETV HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEHHHHHHHCCCEEEECCCCHHHHHHHHH LEPATQEEVDNTVAVMGGEDWKMWVDALREAGLLAEGAKTTAFTYLGEQITHDIYWNGSI HCCCCHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCC GAAKKDLDRTVIGLRESLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKETGT CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC HEGCIEQVYGLLHDTLYGTTPHIDEDGRLRADYKELAPEVQAKVAALWGHVTNENLYELT CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCHHHHHHHHHHHHHCCCCCHHHHH DFAGYKHEFLRLFGFEIAGVDYDADVNPDVPIPGLIQVGM HHCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MIIKPRVRGFICVTTHPVGCEANVKEQIDYVVKQGPIADGPKKVLVIGSSTGYGLAARIS CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH AAFASGADTLGVCFERAGSDSKPGTAGWYNTAAFEKFAKAEGRYARTINGDAFSDEVKRV HHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TLETIKADLGQVDLVVYSLASPRRTHPKTGVVHQSTLKPIGKTVQFRGLDTDREVIRETV HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEHHHHHHHCCCEEEECCCCHHHHHHHHH LEPATQEEVDNTVAVMGGEDWKMWVDALREAGLLAEGAKTTAFTYLGEQITHDIYWNGSI HCCCCHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCC GAAKKDLDRTVIGLRESLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKETGT CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC HEGCIEQVYGLLHDTLYGTTPHIDEDGRLRADYKELAPEVQAKVAALWGHVTNENLYELT CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCHHHHHHHHHHHHHCCCCCHHHHH DFAGYKHEFLRLFGFEIAGVDYDADVNPDVPIPGLIQVGM HHCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA