| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025247
Identifier: 238025247
GI number: 238025247
Start: 2390151
End: 2390534
Strand: Direct
Name: 238025247
Synonym: bglu_2g19190
Alternate gene names: NA
Gene position: 2390151-2390534 (Clockwise)
Preceding gene: 238025246
Following gene: 238025248
Centisome position: 84.54
GC content: 65.36
Gene sequence:
>384_bases ATGGTTTCCCGTCCGTTTGCCGAGTCGTTCGATCTCGAGGCGGCGTTCGCCGACGTCACCGAGCACTGGTCGCCGAAGGT GGTCGCACGCGTCAACGACCAGTACGTGAAGGTGGCCAAGGTACTCGGCCAACTGGCATGGCACGACCACGCGCACGAGG ACGAGCTGTTCTTCGTGGTGCGCGGCCATCTGAAGATCGAGTACGAAGGCTCGCGCGTGGTCGAGCTGCCGGCCGGCTCG ATGCATGTGGTGCCGCGCGGCACGCGCCACAATCCCGTCGCCGAGCAGGAATGCTGGATCGTGCTGATCGAGCCGGTGGC GACGAAGCACACGGGGGACGTGGTGTCGCCGCTGACGAAGACGATCGAGCAACAGCTGCGCTGA
Upstream 100 bases:
>100_bases CCCTGCGATGCGGCGCGACAAGCCGGCGCCGGCGGCGCCTCCTCCACCTCGCGACGAGCCTGCTGCTCGCCGCATCCATC GTTCCAACCTGGAGATAAAC
Downstream 100 bases:
>100_bases GCCGGTGATCGGGCCGGCTCAGCGCCCGGCCAGGGCCGCTTTGCTGCATAAACATAAGACCATTACGGGAAAACACCGAT GCTGTAGTCGAACTACATTC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Mannose-6-Phosphate Isomerase; Cupin Domain Protein; Cupin 2 Protein; Dsbh Domain Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; DSBH Domain-Containing Protein; Cupin Domain-Containing Protein; Facilitator Superfamily Protein; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Conserved Barrel; Cupin Domain-Containing; Cupin Region
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MVSRPFAESFDLEAAFADVTEHWSPKVVARVNDQYVKVAKVLGQLAWHDHAHEDELFFVVRGHLKIEYEGSRVVELPAGS MHVVPRGTRHNPVAEQECWIVLIEPVATKHTGDVVSPLTKTIEQQLR
Sequences:
>Translated_127_residues MVSRPFAESFDLEAAFADVTEHWSPKVVARVNDQYVKVAKVLGQLAWHDHAHEDELFFVVRGHLKIEYEGSRVVELPAGS MHVVPRGTRHNPVAEQECWIVLIEPVATKHTGDVVSPLTKTIEQQLR >Mature_127_residues MVSRPFAESFDLEAAFADVTEHWSPKVVARVNDQYVKVAKVLGQLAWHDHAHEDELFFVVRGHLKIEYEGSRVVELPAGS MHVVPRGTRHNPVAEQECWIVLIEPVATKHTGDVVSPLTKTIEQQLR
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14360; Mature: 14360
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRPFAESFDLEAAFADVTEHWSPKVVARVNDQYVKVAKVLGQLAWHDHAHEDELFFVV CCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEE RGHLKIEYEGSRVVELPAGSMHVVPRGTRHNPVAEQECWIVLIEPVATKHTGDVVSPLTK EEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH TIEQQLR HHHHHCC >Mature Secondary Structure MVSRPFAESFDLEAAFADVTEHWSPKVVARVNDQYVKVAKVLGQLAWHDHAHEDELFFVV CCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEE RGHLKIEYEGSRVVELPAGSMHVVPRGTRHNPVAEQECWIVLIEPVATKHTGDVVSPLTK EEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH TIEQQLR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA