Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025246

Identifier: 238025246

GI number: 238025246

Start: 2389469

End: 2389969

Strand: Direct

Name: 238025246

Synonym: bglu_2g19180

Alternate gene names: NA

Gene position: 2389469-2389969 (Clockwise)

Preceding gene: 238025245

Following gene: 238025247

Centisome position: 84.51

GC content: 74.85

Gene sequence:

>501_bases
ATGAACGGCCGGACCCCCACCCTGCTGCTCGCCGCCTCGGTCGTGCTGAACGTGTTCCTGCTCGGCGCGATCGCGGGCGG
CGCCTATCAGTGGTACGCGCGCCAGCACGGCGCTGGCGGCACCCATGCGCCGAAGCAGGCACTGCGCTTCGCGGCCGACG
GGCTGCCCGCCGAGCGGCAGCGCGAGTTCATGGAGGCGCTGAAAGCGGCGCGCCGCGAGGCGCGCGTCTATGCGCGCGAG
GCCCGCGAGGGCCGCCGCGACGTGCTCGACCTGCTCGCCATGCCGCAACTCGATCGCCCCGCGCTCGACGAGGCGCTGTC
GCGCACGCGCGAGGCCGACACGCGCCTGCGCGCGCAGGTCGAGAGCAACGTGGCCGATTTCGCGGCGAGCCTGACGCCCG
AGGAGCGTCAGCGCTTCGTCCAAGGGCTCAGGCACAGCGGCCAGTGGCGCCTGCCCGCCACGCAGGGCGGGCACGAGCGG
GACGCGCACGGCGGCAACTGA

Upstream 100 bases:

>100_bases
CGATGTCCTCGGCCGTGCTCCCGAGCGCGCCCGCGGCGCTGCACGAGAGCACCTACCTGACCACCAGCTTCGGTGGCTCG
ACCGACGACTGGAGCGGTGA

Downstream 100 bases:

>100_bases
GCCGCACTCGGTTCGCGCCCGAATCAGGCCCGGCTCACGAGCCGCCCGCGGCGGGGCCGCCCGGCGCGCCGCGCGGCGTC
GCCCTGCGATGCGGCGCGAC

Product: putative membrane-associated protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE
AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER
DAHGGN

Sequences:

>Translated_166_residues
MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE
AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER
DAHGGN
>Mature_166_residues
MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE
AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER
DAHGGN

Specific function: Unknown

COG id: COG5612

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18321; Mature: 18321

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
REFMEALKAARREARVYAREAREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHERDAHGGN
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
REFMEALKAARREARVYAREAREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHERDAHGGN
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA