| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025246
Identifier: 238025246
GI number: 238025246
Start: 2389469
End: 2389969
Strand: Direct
Name: 238025246
Synonym: bglu_2g19180
Alternate gene names: NA
Gene position: 2389469-2389969 (Clockwise)
Preceding gene: 238025245
Following gene: 238025247
Centisome position: 84.51
GC content: 74.85
Gene sequence:
>501_bases ATGAACGGCCGGACCCCCACCCTGCTGCTCGCCGCCTCGGTCGTGCTGAACGTGTTCCTGCTCGGCGCGATCGCGGGCGG CGCCTATCAGTGGTACGCGCGCCAGCACGGCGCTGGCGGCACCCATGCGCCGAAGCAGGCACTGCGCTTCGCGGCCGACG GGCTGCCCGCCGAGCGGCAGCGCGAGTTCATGGAGGCGCTGAAAGCGGCGCGCCGCGAGGCGCGCGTCTATGCGCGCGAG GCCCGCGAGGGCCGCCGCGACGTGCTCGACCTGCTCGCCATGCCGCAACTCGATCGCCCCGCGCTCGACGAGGCGCTGTC GCGCACGCGCGAGGCCGACACGCGCCTGCGCGCGCAGGTCGAGAGCAACGTGGCCGATTTCGCGGCGAGCCTGACGCCCG AGGAGCGTCAGCGCTTCGTCCAAGGGCTCAGGCACAGCGGCCAGTGGCGCCTGCCCGCCACGCAGGGCGGGCACGAGCGG GACGCGCACGGCGGCAACTGA
Upstream 100 bases:
>100_bases CGATGTCCTCGGCCGTGCTCCCGAGCGCGCCCGCGGCGCTGCACGAGAGCACCTACCTGACCACCAGCTTCGGTGGCTCG ACCGACGACTGGAGCGGTGA
Downstream 100 bases:
>100_bases GCCGCACTCGGTTCGCGCCCGAATCAGGCCCGGCTCACGAGCCGCCCGCGGCGGGGCCGCCCGGCGCGCCGCGCGGCGTC GCCCTGCGATGCGGCGCGAC
Product: putative membrane-associated protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER DAHGGN
Sequences:
>Translated_166_residues MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER DAHGGN >Mature_166_residues MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQREFMEALKAARREARVYARE AREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQVESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHER DAHGGN
Specific function: Unknown
COG id: COG5612
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18321; Mature: 18321
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQ CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH REFMEALKAARREARVYAREAREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHERDAHGGN HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGRTPTLLLAASVVLNVFLLGAIAGGAYQWYARQHGAGGTHAPKQALRFAADGLPAERQ CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH REFMEALKAARREARVYAREAREGRRDVLDLLAMPQLDRPALDEALSRTREADTRLRAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ESNVADFAASLTPEERQRFVQGLRHSGQWRLPATQGGHERDAHGGN HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA