| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025237
Identifier: 238025237
GI number: 238025237
Start: 2380030
End: 2381169
Strand: Direct
Name: 238025237
Synonym: bglu_2g19090
Alternate gene names: NA
Gene position: 2380030-2381169 (Clockwise)
Preceding gene: 238025236
Following gene: 238025238
Centisome position: 84.18
GC content: 75.26
Gene sequence:
>1140_bases ATGCCGGCTCTTTCCGGTTTTGCCGCGCGCGCCGCCCGCCGTAGCGCCGGCGCCGCCGCGCTCGCCGTGCTGGCCGCCTG CGCGGCCGGCGGCACCGCCGCACCGCCTTCGGCCGCGCGCGAGCCCGAGGCTCCGGCCACGCCGCTGTCCGGCGCGGCGC CGCTCACGCTCGAACACGCCGCCACCGATGCGTTCGTCGCGCAATACGGCATCGCTCCCGATTCGCCGAAGGCCGCGATC CTCGCGCACTGGCGCGAGAAGATGCGCGACGATCCCGACATCCGCCGCCTGCTCGGCAAGCCCGGGCCGGACGCGCTCGG CCGCTCGATCGCGACGCGGCGCGCCGAGCTGTTCAGCGAGGGCTCGCTGCGCGTCTCGCGTGCCGACCGCTCCGCCTTCA TCGCGCTCGGCACGCGCGTGCTCGACGCCGCGCCCGCCGACTGCGGCGGCCTGAAGAGCATGAGCGACGTGATGCTGCGC TATCTGTCGCTCGCGAAGCTCACCGAGCGCGAGGTCGACGACTACTTCCGCATCACCTATGAATCGCTGAAGCGCACCGC GCTGAACACGCCGCTGGCCACCATCAACGCCGAGCAGCGCAGCCAGGGCAGGCAGGCGCTGTCGGCCGCGATCGACCTGC AGTTGCAGCGCGACCCGGCCGCGAGGCGCGCGCTCGCGACCGCCGCCGATCCGGACCGCGCACCCGCCGATGCCTGGTGC CGCAACCTGCGCACCCTGCAGCACGCCGTGATGGCGATGCCGCAGCCCCAGCGCGACTGGCTGCTCATTTCGATCCAGAC CGACGCGATCGCGCAGTTGCATGCGCGCGACGCGGCGGCCTCGGCGGCCCCGCCGCCTCCCGCGCCCGGGCCGCTGGCCT CGCCCGCCTATGCCGAGCGCGTGCGGCAGCGCATTGCGCCGCTCGTCACGCGGCGCGGCACGGCGGACCGGCGCGTGACG CTGGAGATCCGCAGCGCGCCCGACGGCACGCTGCTGTCGGCCGTGATCGTGCAGCCGAGCGGCGACGCCGATTGGGACGA CGCCGTGCTGCGCGCCGTGCGGGCGGCCTCGCCGCTGCCGCCCGATGTGGGCGGCACCACGCCGGCCGCGTTTCGGCTGA CGGTTCCCGCCGAACAGTAA
Upstream 100 bases:
>100_bases CGTGTCCCGGCGAAACGGTCCGCGTGACGATGATGCCGTAGCCCTGCGTGCCGCCGCGGCGGCATGCTAGATTGCCTGCA TCGCACTCACGGAGGCCGCC
Downstream 100 bases:
>100_bases GGGGGGGCCGCGCGGAACCGGCCGGCGCCGTCATCGGAATGTGCCGATGAATATCTTCCAGAGGGTCCTTTCCAATCGCG CGAGCGCAAGCGTTTGCGCA
Product: TonB-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPALSGFAARAARRSAGAAALAVLAACAAGGTAAPPSAAREPEAPATPLSGAAPLTLEHAATDAFVAQYGIAPDSPKAAI LAHWREKMRDDPDIRRLLGKPGPDALGRSIATRRAELFSEGSLRVSRADRSAFIALGTRVLDAAPADCGGLKSMSDVMLR YLSLAKLTEREVDDYFRITYESLKRTALNTPLATINAEQRSQGRQALSAAIDLQLQRDPAARRALATAADPDRAPADAWC RNLRTLQHAVMAMPQPQRDWLLISIQTDAIAQLHARDAAASAAPPPPAPGPLASPAYAERVRQRIAPLVTRRGTADRRVT LEIRSAPDGTLLSAVIVQPSGDADWDDAVLRAVRAASPLPPDVGGTTPAAFRLTVPAEQ
Sequences:
>Translated_379_residues MPALSGFAARAARRSAGAAALAVLAACAAGGTAAPPSAAREPEAPATPLSGAAPLTLEHAATDAFVAQYGIAPDSPKAAI LAHWREKMRDDPDIRRLLGKPGPDALGRSIATRRAELFSEGSLRVSRADRSAFIALGTRVLDAAPADCGGLKSMSDVMLR YLSLAKLTEREVDDYFRITYESLKRTALNTPLATINAEQRSQGRQALSAAIDLQLQRDPAARRALATAADPDRAPADAWC RNLRTLQHAVMAMPQPQRDWLLISIQTDAIAQLHARDAAASAAPPPPAPGPLASPAYAERVRQRIAPLVTRRGTADRRVT LEIRSAPDGTLLSAVIVQPSGDADWDDAVLRAVRAASPLPPDVGGTTPAAFRLTVPAEQ >Mature_378_residues PALSGFAARAARRSAGAAALAVLAACAAGGTAAPPSAAREPEAPATPLSGAAPLTLEHAATDAFVAQYGIAPDSPKAAIL AHWREKMRDDPDIRRLLGKPGPDALGRSIATRRAELFSEGSLRVSRADRSAFIALGTRVLDAAPADCGGLKSMSDVMLRY LSLAKLTEREVDDYFRITYESLKRTALNTPLATINAEQRSQGRQALSAAIDLQLQRDPAARRALATAADPDRAPADAWCR NLRTLQHAVMAMPQPQRDWLLISIQTDAIAQLHARDAAASAAPPPPAPGPLASPAYAERVRQRIAPLVTRRGTADRRVTL EIRSAPDGTLLSAVIVQPSGDADWDDAVLRAVRAASPLPPDVGGTTPAAFRLTVPAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39956; Mature: 39825
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALSGFAARAARRSAGAAALAVLAACAAGGTAAPPSAAREPEAPATPLSGAAPLTLEHA CCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHH ATDAFVAQYGIAPDSPKAAILAHWREKMRDDPDIRRLLGKPGPDALGRSIATRRAELFSE HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC GSLRVSRADRSAFIALGTRVLDAAPADCGGLKSMSDVMLRYLSLAKLTEREVDDYFRITY CCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLKRTALNTPLATINAEQRSQGRQALSAAIDLQLQRDPAARRALATAADPDRAPADAWC HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCHHHHH RNLRTLQHAVMAMPQPQRDWLLISIQTDAIAQLHARDAAASAAPPPPAPGPLASPAYAER HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VRQRIAPLVTRRGTADRRVTLEIRSAPDGTLLSAVIVQPSGDADWDDAVLRAVRAASPLP HHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC PDVGGTTPAAFRLTVPAEQ CCCCCCCCCEEEEECCCCC >Mature Secondary Structure PALSGFAARAARRSAGAAALAVLAACAAGGTAAPPSAAREPEAPATPLSGAAPLTLEHA CCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHH ATDAFVAQYGIAPDSPKAAILAHWREKMRDDPDIRRLLGKPGPDALGRSIATRRAELFSE HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC GSLRVSRADRSAFIALGTRVLDAAPADCGGLKSMSDVMLRYLSLAKLTEREVDDYFRITY CCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLKRTALNTPLATINAEQRSQGRQALSAAIDLQLQRDPAARRALATAADPDRAPADAWC HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCHHHHH RNLRTLQHAVMAMPQPQRDWLLISIQTDAIAQLHARDAAASAAPPPPAPGPLASPAYAER HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VRQRIAPLVTRRGTADRRVTLEIRSAPDGTLLSAVIVQPSGDADWDDAVLRAVRAASPLP HHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC PDVGGTTPAAFRLTVPAEQ CCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA