| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is uxaA [H]
Identifier: 238025183
GI number: 238025183
Start: 2310503
End: 2312029
Strand: Direct
Name: uxaA [H]
Synonym: bglu_2g18540
Alternate gene names: 238025183
Gene position: 2310503-2312029 (Clockwise)
Preceding gene: 238025182
Following gene: 238025184
Centisome position: 81.72
GC content: 72.3
Gene sequence:
>1527_bases ATGAATGCAGGCACGCTCCTGAAACTCCACCGCGACGACAACGTCGCGCTGGCCCTGCGCGCGCTCGATGCCGGCGACGT CGTCGAGCTCGACGGGCATTCCCTGGCGGTGCGCACGCCGGTGCCGGCCGGCCACAAGATCGCGATCCGCGCGCTGGCCC GGGGCGACCGCGTGACCAAGTACCGGCAGACGATCGGCGTGGCGAGCGCCGCGATCGAGGCGGGCGAGCACGTGCACGTG CACAACGTGGACATGCCCGAGCATCCGGCCGGCGGCGCGCCGCTCGGCACCGCGGCGCCGCCGGCGGCCGGCGCCGCGCT GTCCGACACGTTCATGGGCTTCGTGCGCCCCGACGGCCAGGTCGGCACGCGCAACTACATCGGCGTGATCGCGAGCGTCA ATTGCTCGGCCACGGTTTGCCACGCCATCGCGGATGCGTTCCGCGGGCCGGCGCTCGACGCGTTTCCGGAGGTGGACGGC GTGGTCGCGATCACGCACCAGGGCGGATGCGGGCTGGCCGCCACCGGCGACGGCATCGACCTGCTGCGCCGCACGCTGGC CGGCTATGCCCGCAATCCGAATTTCGGCGGCATCCTGCTCGTCGGCCTGGGCTGCGAGGTCAACCAGCTCGACGGCGTGC TCGCCCTGCTCGACGCGCCCGGCGCCGATCCGGTGCGCACCCTCGTGATCCAGGACGAAGGCGGCGTGCGCCAGACCGTG GCGCGCGGGGTGGCCATCGTGCAGGACCTGCTCGACCGCGCCGGCCGCGCGCGCCGCACGCCGGTCTGCGCCTCGCAGCT GAAGGTCGGCCTGCAATGCGGCGGCTCGGACGGCTATTCCGGCATCACCGGCAATCCCGCGCTCGGCGCGGCCGTGGATC TGCTGGTGCGCCACGGCGGCACCGCGATCCTGTCGGAGACGCCGGAAATCTACGGCGCCGAGCACCTGCTGACGGCGCGG GCCGCCTCCGGCGACGTCGCGCAGCGCCTGCTCGACAGGCTGCAATGGTGGGAGCGTTACGCCGCGGACAACGGCGGGGA GCTGAACAACAATCCGTCGCCCGGCAACAAGGCCGGCGGCATCACCACCATCCTCGAGAAATCGCTGGGCGCGGTATCGA AGGGCGGCAGCTCGCCGCTGAACGCGGTGTACGACTACGCCGAGCCGGTGGCCGCGCGCGGCCTGGTGTTCATGGACACG CCCGGCTACGACCCGGTCTCGGCCACCGGGCAGGTGGCGGGCGGGGCGAACCTGATTTGCTTCACGACCGGCCGCGGCTC GGTGTTCGGCTCGAAGCCGGTGCCCACCATCAAGATCGCGACCACCACCGGCCTGTTCGAGCGGATGCGCGCCGACATGG ATTTCAACAGTGGCCCGATCGTCGACGGCCAGCTCGAGGTGGCGGCCGCGGGCGAGCAGTTGTTTCGCCTGATGCTGGAG GTCGCCTCGGGGCGCCGGACCTGCGGCGAGGACAACGGCATCGGCGACCGCGAGTTCGTGCCCTGGCTGCGCGGGGCGGT AATGTGA
Upstream 100 bases:
>100_bases CGCTGGCGGACGCGCATGTCCCGGGCCACGCCCAACCGCGCCTGCGCGGCCTGCTGGCCGGGCGCGACCTGCCGGAACCG ACTTGAGAGGAACACGCATC
Downstream 100 bases:
>100_bases CCGGCGACGCCGCGGCGCGGAGGTGCGACGCGTCAAGCCGGCCCTCGCATGATCGGGAGAGCGAATGAAGCACGGGCCCC TCGAGACAGGCGCGCGCCAA
Product: Altronate dehydratase
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MNAGTLLKLHRDDNVALALRALDAGDVVELDGHSLAVRTPVPAGHKIAIRALARGDRVTKYRQTIGVASAAIEAGEHVHV HNVDMPEHPAGGAPLGTAAPPAAGAALSDTFMGFVRPDGQVGTRNYIGVIASVNCSATVCHAIADAFRGPALDAFPEVDG VVAITHQGGCGLAATGDGIDLLRRTLAGYARNPNFGGILLVGLGCEVNQLDGVLALLDAPGADPVRTLVIQDEGGVRQTV ARGVAIVQDLLDRAGRARRTPVCASQLKVGLQCGGSDGYSGITGNPALGAAVDLLVRHGGTAILSETPEIYGAEHLLTAR AASGDVAQRLLDRLQWWERYAADNGGELNNNPSPGNKAGGITTILEKSLGAVSKGGSSPLNAVYDYAEPVAARGLVFMDT PGYDPVSATGQVAGGANLICFTTGRGSVFGSKPVPTIKIATTTGLFERMRADMDFNSGPIVDGQLEVAAAGEQLFRLMLE VASGRRTCGEDNGIGDREFVPWLRGAVM
Sequences:
>Translated_508_residues MNAGTLLKLHRDDNVALALRALDAGDVVELDGHSLAVRTPVPAGHKIAIRALARGDRVTKYRQTIGVASAAIEAGEHVHV HNVDMPEHPAGGAPLGTAAPPAAGAALSDTFMGFVRPDGQVGTRNYIGVIASVNCSATVCHAIADAFRGPALDAFPEVDG VVAITHQGGCGLAATGDGIDLLRRTLAGYARNPNFGGILLVGLGCEVNQLDGVLALLDAPGADPVRTLVIQDEGGVRQTV ARGVAIVQDLLDRAGRARRTPVCASQLKVGLQCGGSDGYSGITGNPALGAAVDLLVRHGGTAILSETPEIYGAEHLLTAR AASGDVAQRLLDRLQWWERYAADNGGELNNNPSPGNKAGGITTILEKSLGAVSKGGSSPLNAVYDYAEPVAARGLVFMDT PGYDPVSATGQVAGGANLICFTTGRGSVFGSKPVPTIKIATTTGLFERMRADMDFNSGPIVDGQLEVAAAGEQLFRLMLE VASGRRTCGEDNGIGDREFVPWLRGAVM >Mature_508_residues MNAGTLLKLHRDDNVALALRALDAGDVVELDGHSLAVRTPVPAGHKIAIRALARGDRVTKYRQTIGVASAAIEAGEHVHV HNVDMPEHPAGGAPLGTAAPPAAGAALSDTFMGFVRPDGQVGTRNYIGVIASVNCSATVCHAIADAFRGPALDAFPEVDG VVAITHQGGCGLAATGDGIDLLRRTLAGYARNPNFGGILLVGLGCEVNQLDGVLALLDAPGADPVRTLVIQDEGGVRQTV ARGVAIVQDLLDRAGRARRTPVCASQLKVGLQCGGSDGYSGITGNPALGAAVDLLVRHGGTAILSETPEIYGAEHLLTAR AASGDVAQRLLDRLQWWERYAADNGGELNNNPSPGNKAGGITTILEKSLGAVSKGGSSPLNAVYDYAEPVAARGLVFMDT PGYDPVSATGQVAGGANLICFTTGRGSVFGSKPVPTIKIATTTGLFERMRADMDFNSGPIVDGQLEVAAAGEQLFRLMLE VASGRRTCGEDNGIGDREFVPWLRGAVM
Specific function: D-galactarate metabolism; first step. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789516, Length=499, Percent_Identity=37.875751503006, Blast_Score=311, Evalue=8e-86, Organism=Escherichia coli, GI1789475, Length=502, Percent_Identity=33.8645418326693, Blast_Score=271, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 52422; Mature: 52422
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGTLLKLHRDDNVALALRALDAGDVVELDGHSLAVRTPVPAGHKIAIRALARGDRVTK CCCCCEEEEECCCCEEEEEEECCCCCEEEECCCEEEEECCCCCCCCEEEEEHHCCCHHHH YRQTIGVASAAIEAGEHVHVHNVDMPEHPAGGAPLGTAAPPAAGAALSDTFMGFVRPDGQ HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCC VGTRNYIGVIASVNCSATVCHAIADAFRGPALDAFPEVDGVVAITHQGGCGLAATGDGID CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEECCCCHH LLRRTLAGYARNPNFGGILLVGLGCEVNQLDGVLALLDAPGADPVRTLVIQDEGGVRQTV HHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCEEEEECCCCCCCEEEEEEECCCCHHHHH ARGVAIVQDLLDRAGRARRTPVCASQLKVGLQCGGSDGYSGITGNPALGAAVDLLVRHGG HHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC TAILSETPEIYGAEHLLTARAASGDVAQRLLDRLQWWERYAADNGGELNNNPSPGNKAGG CEEECCCCCHHCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ITTILEKSLGAVSKGGSSPLNAVYDYAEPVAARGLVFMDTPGYDPVSATGQVAGGANLIC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE FTTGRGSVFGSKPVPTIKIATTTGLFERMRADMDFNSGPIVDGQLEVAAAGEQLFRLMLE EECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCEECCCEEEHHHHHHHHHHHHH VASGRRTCGEDNGIGDREFVPWLRGAVM HHCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNAGTLLKLHRDDNVALALRALDAGDVVELDGHSLAVRTPVPAGHKIAIRALARGDRVTK CCCCCEEEEECCCCEEEEEEECCCCCEEEECCCEEEEECCCCCCCCEEEEEHHCCCHHHH YRQTIGVASAAIEAGEHVHVHNVDMPEHPAGGAPLGTAAPPAAGAALSDTFMGFVRPDGQ HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCC VGTRNYIGVIASVNCSATVCHAIADAFRGPALDAFPEVDGVVAITHQGGCGLAATGDGID CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEECCCCHH LLRRTLAGYARNPNFGGILLVGLGCEVNQLDGVLALLDAPGADPVRTLVIQDEGGVRQTV HHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCEEEEECCCCCCCEEEEEEECCCCHHHHH ARGVAIVQDLLDRAGRARRTPVCASQLKVGLQCGGSDGYSGITGNPALGAAVDLLVRHGG HHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC TAILSETPEIYGAEHLLTARAASGDVAQRLLDRLQWWERYAADNGGELNNNPSPGNKAGG CEEECCCCCHHCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ITTILEKSLGAVSKGGSSPLNAVYDYAEPVAARGLVFMDTPGYDPVSATGQVAGGANLIC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE FTTGRGSVFGSKPVPTIKIATTTGLFERMRADMDFNSGPIVDGQLEVAAAGEQLFRLMLE EECCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCEECCCEEEHHHHHHHHHHHHH VASGRRTCGEDNGIGDREFVPWLRGAVM HHCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]