| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is uxaB [H]
Identifier: 238025182
GI number: 238025182
Start: 2309346
End: 2310488
Strand: Direct
Name: uxaB [H]
Synonym: bglu_2g18530
Alternate gene names: 238025182
Gene position: 2309346-2310488 (Clockwise)
Preceding gene: 238025181
Following gene: 238025183
Centisome position: 81.68
GC content: 72.0
Gene sequence:
>1143_bases ATGAGCGTCCCCATCCTCCAGTTCGGCACGAGCCGGTTCCTGCTCGCGCATGCCGCCTTCTTCGTGTCCGAGGCGCTCGC GCGCGGCGAGGCGATCGGCAGCATCGGCGTGGTGCAGACCACCTCGAACCCGGCCAGCCGCGCCCGCATCGAGGCGCTGG CCGCGGCCGGCCGCTATCCGGTGCGCATCCGCGGACTGGCCGACGGCGCCGTGATCGACCGCGTCGTGCCATGCGAGGCG GTGCGCCAGGCCTGGACCGCCGCGGCCGACTGGGCCGCGATCCGCCAGGCCGTCGTCGACGAGGTGCGCGTCATCGTGTC GAACACGGCCGATGCCGGCTACCGGCTCGACGCGCGCGACTCGGCCGAGGCGCTCGCCGACCCGGCCCGGGTGCCGCACA GCTTCCCGGCGAAGCTGCTGACGCTGCTTCATGCGCGCTGGCAGCAGCGCCCCGACGACGGCCTCACGCTGCTGCCCTGC GAGCTGATCGCGCACAACGGCGACACGCTGCGCGACATCGTGCTGGATCTGGCCCGGCAGTGGCGCCTGCCCGACGGCTT GCTCGCCTACCTGCGGCACACCTGCGTCTGGGTGAATTCGCTCGTGGACCGGATCGTGTCCGAGGCGATCGATCCGGTGG GCGCGATCGCCGAGCCATACGCACTGTGGGCCATCGAGCGGCAGGCCGGCATGACGCTGCCCTGCACGCACGAGCAGATC GTCGTGACGGACGACCTGGTCAGCCACGAACGCCTGAAACTGTTCTTCCTCAACCTGGGCCACACCTGGCTGGCCGAGCA GTGGCTGCGCGACGGCCGCCCGCCCGACGAAACGGTGCGCGAGGCGCTCGCCGATGCGCGGCTCAGCGACGGGATCGAGC ACGTCTGGCGCGACGAGGTGCTGCCGGTGTTCGCGGCCCTGGGCCAGCGCGAGGCGGCCGAGCGCTATATCGACACGGTG CGCGACCGTCTGCTCAACCCCTACCTGAACCACCGCATCGCGGACATCGCGACTCACCACGACGAAAAGATCCGGCGCCG GATTCGCCCCTTGATCGCGCTGGCGGACGCGCATGTCCCGGGCCACGCCCAACCGCGCCTGCGCGGCCTGCTGGCCGGGC GCGACCTGCCGGAACCGACTTGA
Upstream 100 bases:
>100_bases GTGCCCGAGGCGCTGCCGCGGCTGCTCGAGCCGGGGCAGACCGTGGTGAAGGCGCTCGTCGAGTGTTGACCGGCATGCCA ACGCAACCAGGACCCGCCGC
Downstream 100 bases:
>100_bases GAGGAACACGCATCATGAATGCAGGCACGCTCCTGAAACTCCACCGCGACGACAACGTCGCGCTGGCCCTGCGCGCGCTC GATGCCGGCGACGTCGTCGA
Product: Mannitol dehydrogenase-like protein
Products: NA
Alternate protein names: Tagaturonate dehydrogenase; Tagaturonate reductase [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSVPILQFGTSRFLLAHAAFFVSEALARGEAIGSIGVVQTTSNPASRARIEALAAAGRYPVRIRGLADGAVIDRVVPCEA VRQAWTAAADWAAIRQAVVDEVRVIVSNTADAGYRLDARDSAEALADPARVPHSFPAKLLTLLHARWQQRPDDGLTLLPC ELIAHNGDTLRDIVLDLARQWRLPDGLLAYLRHTCVWVNSLVDRIVSEAIDPVGAIAEPYALWAIERQAGMTLPCTHEQI VVTDDLVSHERLKLFFLNLGHTWLAEQWLRDGRPPDETVREALADARLSDGIEHVWRDEVLPVFAALGQREAAERYIDTV RDRLLNPYLNHRIADIATHHDEKIRRRIRPLIALADAHVPGHAQPRLRGLLAGRDLPEPT
Sequences:
>Translated_380_residues MSVPILQFGTSRFLLAHAAFFVSEALARGEAIGSIGVVQTTSNPASRARIEALAAAGRYPVRIRGLADGAVIDRVVPCEA VRQAWTAAADWAAIRQAVVDEVRVIVSNTADAGYRLDARDSAEALADPARVPHSFPAKLLTLLHARWQQRPDDGLTLLPC ELIAHNGDTLRDIVLDLARQWRLPDGLLAYLRHTCVWVNSLVDRIVSEAIDPVGAIAEPYALWAIERQAGMTLPCTHEQI VVTDDLVSHERLKLFFLNLGHTWLAEQWLRDGRPPDETVREALADARLSDGIEHVWRDEVLPVFAALGQREAAERYIDTV RDRLLNPYLNHRIADIATHHDEKIRRRIRPLIALADAHVPGHAQPRLRGLLAGRDLPEPT >Mature_379_residues SVPILQFGTSRFLLAHAAFFVSEALARGEAIGSIGVVQTTSNPASRARIEALAAAGRYPVRIRGLADGAVIDRVVPCEAV RQAWTAAADWAAIRQAVVDEVRVIVSNTADAGYRLDARDSAEALADPARVPHSFPAKLLTLLHARWQQRPDDGLTLLPCE LIAHNGDTLRDIVLDLARQWRLPDGLLAYLRHTCVWVNSLVDRIVSEAIDPVGAIAEPYALWAIERQAGMTLPCTHEQIV VTDDLVSHERLKLFFLNLGHTWLAEQWLRDGRPPDETVREALADARLSDGIEHVWRDEVLPVFAALGQREAAERYIDTVR DRLLNPYLNHRIADIATHHDEKIRRRIRPLIALADAHVPGHAQPRLRGLLAGRDLPEPT
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994885, Length=393, Percent_Identity=28.7531806615776, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788497, Length=370, Percent_Identity=25.4054054054054, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.58 [H]
Molecular weight: Translated: 42170; Mature: 42038
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPILQFGTSRFLLAHAAFFVSEALARGEAIGSIGVVQTTSNPASRARIEALAAAGRYP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC VRIRGLADGAVIDRVVPCEAVRQAWTAAADWAAIRQAVVDEVRVIVSNTADAGYRLDARD EEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC SAEALADPARVPHSFPAKLLTLLHARWQQRPDDGLTLLPCELIAHNGDTLRDIVLDLARQ CHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHH WRLPDGLLAYLRHTCVWVNSLVDRIVSEAIDPVGAIAEPYALWAIERQAGMTLPCTHEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHEEEHHHCCCCCCCCCCEE VVTDDLVSHERLKLFFLNLGHTWLAEQWLRDGRPPDETVREALADARLSDGIEHVWRDEV EEEHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LPVFAALGQREAAERYIDTVRDRLLNPYLNHRIADIATHHDEKIRRRIRPLIALADAHVP HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC GHAQPRLRGLLAGRDLPEPT CCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure SVPILQFGTSRFLLAHAAFFVSEALARGEAIGSIGVVQTTSNPASRARIEALAAAGRYP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC VRIRGLADGAVIDRVVPCEAVRQAWTAAADWAAIRQAVVDEVRVIVSNTADAGYRLDARD EEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC SAEALADPARVPHSFPAKLLTLLHARWQQRPDDGLTLLPCELIAHNGDTLRDIVLDLARQ CHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHH WRLPDGLLAYLRHTCVWVNSLVDRIVSEAIDPVGAIAEPYALWAIERQAGMTLPCTHEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHEEEHHHCCCCCCCCCCEE VVTDDLVSHERLKLFFLNLGHTWLAEQWLRDGRPPDETVREALADARLSDGIEHVWRDEV EEEHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LPVFAALGQREAAERYIDTVRDRLLNPYLNHRIADIATHHDEKIRRRIRPLIALADAHVP HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC GHAQPRLRGLLAGRDLPEPT CCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]