| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025180
Identifier: 238025180
GI number: 238025180
Start: 2307407
End: 2308291
Strand: Direct
Name: 238025180
Synonym: bglu_2g18510
Alternate gene names: NA
Gene position: 2307407-2308291 (Clockwise)
Preceding gene: 238025179
Following gene: 238025181
Centisome position: 81.61
GC content: 71.98
Gene sequence:
>885_bases ATGATGCCGAGAGTCGACGCTCACCAGCATTACTGGCGCATCGCCGCGCGCGGGGGCTATTGGCCGCCCGGCGAGCTGCG GGCGATCTTCCGCGATTTCACCCCGCCGGACCTGGCGCCGGAACTCGAGGCCGCCGGCATCGACGGCACCGTGCTCGTGC AGTCGCTGCCCACCGAGGCGGACACGCAGTATCTGCTCGAGCTGGCCGCCGGCACCGACTCGGTCTGGGCGGTGGTCGGC TGGGTCGATCTGAAGGGCGCCGACGCCGCGAGTCGGATCGCAAGCTTTGCCGCGCACCCGAAGGCGCGCGGCCTGCGGCC GATGCTGCAGGATCTCGCCGACGACGCCTGGATAGACGATCCCGCACTGGAGCCGGCCGTGGCCGCCATGCTGGCGCACC GGCTGTGCTTCGACGCCCTGGTGCTGCCGCGCCATCTGGATGCGCTGCTCGCCTTCGCGCAACGCTTCCCCGACTTGCCG ATCGTCATCGACCACGGCGCGAAGCCGGCCATCGCGCGCGGGGAAAGCGAGCCGTGGCGGGCGCGCATGACGCGTCTGGC GAGCCTGCCGAACGTCCATTGCAAGCTGTCGGGCCTCTGGACCGAGGCCGGCGCGGCAGCGGATCGCGACGCGCTGGACA CGCGCAGCTGGCCCTACGTGCAGGCGCTTGCCGAGCTGTTCGGCCCGCGCCGCCTGATGTGGGGCAGCGACTGGCCGGTG CTGCGCCTGGCCGACGGCTGCAACGGCTACGCCGACTGGCTGGCCGCCTGCGAGGAACAGGGCAGGCGCGCCTTCGGCCC CGATGCCGCTGGCGACCTGTTCGGCGGCAATGCGTGCCGTTTCTACGGAATCGGCCCGTCGGGCCGGTCCACCCGATCCC AATGA
Upstream 100 bases:
>100_bases ACATCGCCTGGCTCGAGCACGAGATTCCCGGCGCGCTGTGGGACGCGCTTCGGCACGAGGCGCTGATCGACGAGGCGGCG CCGGTGCCGGGGAGCGCGAG
Downstream 100 bases:
>100_bases AAGGAGCTTCCCATGCTTAGCGTGATCTGCGAAGCGCCCGGCGTGCTGCGGGCACTGCAACGCGACCTGCCCGTGCGCGG CAGCGGCGAAATACTGTTGC
Product: Amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MMPRVDAHQHYWRIAARGGYWPPGELRAIFRDFTPPDLAPELEAAGIDGTVLVQSLPTEADTQYLLELAAGTDSVWAVVG WVDLKGADAASRIASFAAHPKARGLRPMLQDLADDAWIDDPALEPAVAAMLAHRLCFDALVLPRHLDALLAFAQRFPDLP IVIDHGAKPAIARGESEPWRARMTRLASLPNVHCKLSGLWTEAGAAADRDALDTRSWPYVQALAELFGPRRLMWGSDWPV LRLADGCNGYADWLAACEEQGRRAFGPDAAGDLFGGNACRFYGIGPSGRSTRSQ
Sequences:
>Translated_294_residues MMPRVDAHQHYWRIAARGGYWPPGELRAIFRDFTPPDLAPELEAAGIDGTVLVQSLPTEADTQYLLELAAGTDSVWAVVG WVDLKGADAASRIASFAAHPKARGLRPMLQDLADDAWIDDPALEPAVAAMLAHRLCFDALVLPRHLDALLAFAQRFPDLP IVIDHGAKPAIARGESEPWRARMTRLASLPNVHCKLSGLWTEAGAAADRDALDTRSWPYVQALAELFGPRRLMWGSDWPV LRLADGCNGYADWLAACEEQGRRAFGPDAAGDLFGGNACRFYGIGPSGRSTRSQ >Mature_294_residues MMPRVDAHQHYWRIAARGGYWPPGELRAIFRDFTPPDLAPELEAAGIDGTVLVQSLPTEADTQYLLELAAGTDSVWAVVG WVDLKGADAASRIASFAAHPKARGLRPMLQDLADDAWIDDPALEPAVAAMLAHRLCFDALVLPRHLDALLAFAQRFPDLP IVIDHGAKPAIARGESEPWRARMTRLASLPNVHCKLSGLWTEAGAAADRDALDTRSWPYVQALAELFGPRRLMWGSDWPV LRLADGCNGYADWLAACEEQGRRAFGPDAAGDLFGGNACRFYGIGPSGRSTRSQ
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 32034; Mature: 32034
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRVDAHQHYWRIAARGGYWPPGELRAIFRDFTPPDLAPELEAAGIDGTVLVQSLPTEA CCCCCCCHHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCH DTQYLLELAAGTDSVWAVVGWVDLKGADAASRIASFAAHPKARGLRPMLQDLADDAWIDD HHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCC PALEPAVAAMLAHRLCFDALVLPRHLDALLAFAQRFPDLPIVIDHGAKPAIARGESEPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH ARMTRLASLPNVHCKLSGLWTEAGAAADRDALDTRSWPYVQALAELFGPRRLMWGSDWPV HHHHHHHCCCCCEEEEEEEEHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCEEECCCCCCE LRLADGCNGYADWLAACEEQGRRAFGPDAAGDLFGGNACRFYGIGPSGRSTRSQ EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MMPRVDAHQHYWRIAARGGYWPPGELRAIFRDFTPPDLAPELEAAGIDGTVLVQSLPTEA CCCCCCCHHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCH DTQYLLELAAGTDSVWAVVGWVDLKGADAASRIASFAAHPKARGLRPMLQDLADDAWIDD HHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCC PALEPAVAAMLAHRLCFDALVLPRHLDALLAFAQRFPDLPIVIDHGAKPAIARGESEPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH ARMTRLASLPNVHCKLSGLWTEAGAAADRDALDTRSWPYVQALAELFGPRRLMWGSDWPV HHHHHHHCCCCCEEEEEEEEHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCEEECCCCCCE LRLADGCNGYADWLAACEEQGRRAFGPDAAGDLFGGNACRFYGIGPSGRSTRSQ EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]