| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is pld1 [H]
Identifier: 238025179
GI number: 238025179
Start: 2306394
End: 2307410
Strand: Direct
Name: pld1 [H]
Synonym: bglu_2g18500
Alternate gene names: 238025179
Gene position: 2306394-2307410 (Clockwise)
Preceding gene: 238025178
Following gene: 238025180
Centisome position: 81.57
GC content: 73.06
Gene sequence:
>1017_bases ATGAACGCTCACGATACCCGCGCCCTGCCTCGCAACGGGCTGCCGCTGACGGCGCTCGGCCTCGGCTGCTCGCAGCTGGG CGGCCTCTACACGGCCATGGCGGACGCCGAGGCCGACGCGCTGATGGACGCGGCCTGGGCCGCCGGCCTGCGCTACTTCG ATTCCGCGCCCTATTACGGCTACACGCTCTCGGAGCGCCGCGTCGGGCGCTCGCTCGCGGCACGCCCGCGCGACGCGTTC ACCCTGAGCACCAAGGTGGGCCGCCTGATGCGGCCCGACGCGAGCGTGCGGCCCGGCGACGACGGCTGGGCCGCGCCGCT GCCGTTCCGCCCCGTCTTCGACTATAGCTACGACGGCATCCTGCGCTCCTACGAAGACAGCCGGCAGCGGCTCGGCCTGG CGAAGATCGACGTGCTGTACGTCCACGACATCGGCCGCATGACGCACGGCGAGCGCCATGCGCAGCATTGGGACAGCTTG ACCAGGGGCGGCGGCTTTCGCGCGCTGGAAGCGCTGCGCGAGGCCGGCGAGATCGGCGCGTTCGGCCTGGGCGTCAACGA ATGGGAAGTGGCCGCCGATGCGCTCGACGAGGCGGCGCTCGACGTCATCCTGCTGGCCGGCCGCTACACGCTGCTCGAGC AGACGGCGCTGGCGCCGCTGCTCGACCGCTGCCTGCGGGCCGGCACGGGCCTCGTCGTCGGCGGCGTGTTCAACTCCGGC CTGCTGACCGGCAACGGCAAATTCAACTACGCCGACGCGCCCGCCGACGTGATCGACAAGGCCGCGCGGCTCGCGGCCGT CTGCGCGCGCTTCGCGGTCCCGCTGCCGGCCGCGGCGCTGCAGTTCCCGTTCGCCCACCCGGCGGTGGTGTCGTGCCTGG TCGGCGCGCGCAGCGTGGCGCAGTTGCAGCAGAACATCGCCTGGCTCGAGCACGAGATTCCCGGCGCGCTGTGGGACGCG CTTCGGCACGAGGCGCTGATCGACGAGGCGGCGCCGGTGCCGGGGAGCGCGAGATGA
Upstream 100 bases:
>100_bases AACGTCCTGTACTGAAGCCCTGCCGCGGCGGCGGGCGGGCTCGCCGCCGCCGCGCCCGCCGCCCCTCTCAACCCTGCTTG CTCATTTGCCTGGTGGCATC
Downstream 100 bases:
>100_bases TGCCGAGAGTCGACGCTCACCAGCATTACTGGCGCATCGCCGCGCGCGGGGGCTATTGGCCGCCCGGCGAGCTGCGGGCG ATCTTCCGCGATTTCACCCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MNAHDTRALPRNGLPLTALGLGCSQLGGLYTAMADAEADALMDAAWAAGLRYFDSAPYYGYTLSERRVGRSLAARPRDAF TLSTKVGRLMRPDASVRPGDDGWAAPLPFRPVFDYSYDGILRSYEDSRQRLGLAKIDVLYVHDIGRMTHGERHAQHWDSL TRGGGFRALEALREAGEIGAFGLGVNEWEVAADALDEAALDVILLAGRYTLLEQTALAPLLDRCLRAGTGLVVGGVFNSG LLTGNGKFNYADAPADVIDKAARLAAVCARFAVPLPAAALQFPFAHPAVVSCLVGARSVAQLQQNIAWLEHEIPGALWDA LRHEALIDEAAPVPGSAR
Sequences:
>Translated_338_residues MNAHDTRALPRNGLPLTALGLGCSQLGGLYTAMADAEADALMDAAWAAGLRYFDSAPYYGYTLSERRVGRSLAARPRDAF TLSTKVGRLMRPDASVRPGDDGWAAPLPFRPVFDYSYDGILRSYEDSRQRLGLAKIDVLYVHDIGRMTHGERHAQHWDSL TRGGGFRALEALREAGEIGAFGLGVNEWEVAADALDEAALDVILLAGRYTLLEQTALAPLLDRCLRAGTGLVVGGVFNSG LLTGNGKFNYADAPADVIDKAARLAAVCARFAVPLPAAALQFPFAHPAVVSCLVGARSVAQLQQNIAWLEHEIPGALWDA LRHEALIDEAAPVPGSAR >Mature_338_residues MNAHDTRALPRNGLPLTALGLGCSQLGGLYTAMADAEADALMDAAWAAGLRYFDSAPYYGYTLSERRVGRSLAARPRDAF TLSTKVGRLMRPDASVRPGDDGWAAPLPFRPVFDYSYDGILRSYEDSRQRLGLAKIDVLYVHDIGRMTHGERHAQHWDSL TRGGGFRALEALREAGEIGAFGLGVNEWEVAADALDEAALDVILLAGRYTLLEQTALAPLLDRCLRAGTGLVVGGVFNSG LLTGNGKFNYADAPADVIDKAARLAAVCARFAVPLPAAALQFPFAHPAVVSCLVGARSVAQLQQNIAWLEHEIPGALWDA LRHEALIDEAAPVPGSAR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=25.4658385093168, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI212645785, Length=304, Percent_Identity=25.3289473684211, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24646159, Length=313, Percent_Identity=27.1565495207668, Blast_Score=85, Evalue=9e-17, Organism=Drosophila melanogaster, GI24646155, Length=305, Percent_Identity=26.5573770491803, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.107 [H]
Molecular weight: Translated: 36218; Mature: 36218
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHDTRALPRNGLPLTALGLGCSQLGGLYTAMADAEADALMDAAWAAGLRYFDSAPYYG CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YTLSERRVGRSLAARPRDAFTLSTKVGRLMRPDASVRPGDDGWAAPLPFRPVFDYSYDGI EEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LRSYEDSRQRLGLAKIDVLYVHDIGRMTHGERHAQHWDSLTRGGGFRALEALREAGEIGA HHHHHHHHHHCCHHHEEEEEEECHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE FGLGVNEWEVAADALDEAALDVILLAGRYTLLEQTALAPLLDRCLRAGTGLVVGGVFNSG ECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC LLTGNGKFNYADAPADVIDKAARLAAVCARFAVPLPAAALQFPFAHPAVVSCLVGARSVA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHH QLQQNIAWLEHEIPGALWDALRHEALIDEAAPVPGSAR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNAHDTRALPRNGLPLTALGLGCSQLGGLYTAMADAEADALMDAAWAAGLRYFDSAPYYG CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YTLSERRVGRSLAARPRDAFTLSTKVGRLMRPDASVRPGDDGWAAPLPFRPVFDYSYDGI EEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LRSYEDSRQRLGLAKIDVLYVHDIGRMTHGERHAQHWDSLTRGGGFRALEALREAGEIGA HHHHHHHHHHCCHHHEEEEEEECHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE FGLGVNEWEVAADALDEAALDVILLAGRYTLLEQTALAPLLDRCLRAGTGLVVGGVFNSG ECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC LLTGNGKFNYADAPADVIDKAARLAAVCARFAVPLPAAALQFPFAHPAVVSCLVGARSVA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHH QLQQNIAWLEHEIPGALWDALRHEALIDEAAPVPGSAR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA