| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is otsA [H]
Identifier: 238025174
GI number: 238025174
Start: 2300286
End: 2301707
Strand: Direct
Name: otsA [H]
Synonym: bglu_2g18450
Alternate gene names: 238025174
Gene position: 2300286-2301707 (Clockwise)
Preceding gene: 238025171
Following gene: 238025176
Centisome position: 81.36
GC content: 68.28
Gene sequence:
>1422_bases GTGAGCCGTCTCGTCGTGGTATCGAATCGCACCTATGATCCGGACAGCCCGACGCCGGGCGGCCTGGCCGTCGCGCTGAA CGAGAGTCTGCAGCAGCGCGGCGGCATCTGGTTCGGCTGGAGCGGCAAGCTCACCGAAGCCGACCCGGCTACCCAGCCAG TGCAGACGCGCGAAGTGGGCAACATGCGGCTCGCCACCATCGACATGTCGCAGCGCGACTACGACGCGTTCTATCTCGGC TACTCCAACAACGTGCTCTGGCCGGTGTTCCACTACCGGCTCGACCTCGCCAACTTCGACGTGCAGTTCAGCGACGGCTA TCGCCGCGTGAACCGGCTGTTCGCGCAAAAGCTGCTGCCGCTGCTCGAGCCCGACGACGTGCTCTGGGTCCACGACTATC ACCTGATCCCGCTCGCCACCGAACTGCGCGCCCAGGGCTGCCGCAACCGCATCGGCTTCTTCCTGCACATCCCCGTGCCG CCGCCGCAGATCATGGCCGCCATCCCCGAACACGAATGGCTGATGCGCTCGCTGTTCGCCTACGACCTGGTCGGCTTCCA GGCGCATACCGACGTCACCCACTTCGTGCGCTACGCCGAGGCCGAGGCCGAGGCGCAACTGATCGACGGCGAGCGGCTGC GCGCCTTCGGCCGCACCATCCGCGTCGGCGCGTTCCCGATCGGCATCGACGTGGACGGCTTCTCGCAAATGGCCACCGAC GACGACGGCCTCAACGTCTACGAACAGATGCGCGACGAATACTCGCGCCGTAAGCTGCTGCTCGGCGTGGACCGGCTCGA TTACTCGAAAGGGCTGCCGCAGCGCGTGCAGGCGTTCCGCGCCATGCTCGAGATGTTCCCGGAGATGCGCAAGCACGCCA CGCTGATCCAGATCGCCGCGCCCAGCCGCGAGGACGTGAGCGCCTACAGCCGGCTGCGCCAGCAGATGGATGCGTTGTGC GGCTCGATCAACGGCGACTACGGCGAACTCGACTGGATGCCGGTACGCTACATCCACCGCAGCCTGGACCGCACCTCGCT GCCGGGCCTCTATCGCGCGAGCCGCGTGGCGCTCGTCACGCCGCTGCGCGACGGCATGAACCTGGTGGCCAAGGAATTCA TCGCCGCGCAGGACGCGAAGAACCCGGGCGTGCTGGTGCTCTCGCGCTTCGCCGGCGCCGCCGAGCAGCTGACCGACGCG CTGCTCGTGAATCCCTACGATATCCAGGGCACCGCGCGCGCGATCCACGCCGCGCTGACGATGCCGCTGGAGGAACGCGT GCGGCGCCATGCGGCGCTGCTGGCCCAGATCCGCAGACACGACGTGCACCACTGGGCGGCCGGCTTTCTCGGCGCGCTCG ACGGCACGAATCGCCCGGCGCAGGCGCGGCGCACGCGCGAACTGGCCGATTCCGTCGCCTAG
Upstream 100 bases:
>100_bases GTGGCGTTCGACGGCGTCATCGCCGGCTTGCCGGGCCTGCCGGAGACCGGCGGCCACCATCAAAGATCATCGGAGTCCCA ACGAACCGCAGGAGCCCATC
Downstream 100 bases:
>100_bases TTCCGCGGCGGCGGCACGCCCGCCTCGGCCGCCGCCGCCGCGCCCGCCCCGCCTCAGCCGCCGCTACGCCGCGGCCTGCT AATCGGCCGTGCGGCTCTGC
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSRLVVVSNRTYDPDSPTPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLG YSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVP PPQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFRAMLEMFPEMRKHATLIQIAAPSREDVSAYSRLRQQMDALC GSINGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKNPGVLVLSRFAGAAEQLTDA LLVNPYDIQGTARAIHAALTMPLEERVRRHAALLAQIRRHDVHHWAAGFLGALDGTNRPAQARRTRELADSVA
Sequences:
>Translated_473_residues MSRLVVVSNRTYDPDSPTPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLG YSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVP PPQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFRAMLEMFPEMRKHATLIQIAAPSREDVSAYSRLRQQMDALC GSINGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKNPGVLVLSRFAGAAEQLTDA LLVNPYDIQGTARAIHAALTMPLEERVRRHAALLAQIRRHDVHHWAAGFLGALDGTNRPAQARRTRELADSVA >Mature_472_residues SRLVVVSNRTYDPDSPTPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLGY SNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPP PQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATDD DGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFRAMLEMFPEMRKHATLIQIAAPSREDVSAYSRLRQQMDALCG SINGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKNPGVLVLSRFAGAAEQLTDAL LVNPYDIQGTARAIHAALTMPLEERVRRHAALLAQIRRHDVHHWAAGFLGALDGTNRPAQARRTRELADSVA
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=455, Percent_Identity=47.4725274725275, Blast_Score=403, Evalue=1e-113, Organism=Caenorhabditis elegans, GI71987012, Length=430, Percent_Identity=28.3720930232558, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI115533558, Length=427, Percent_Identity=29.5081967213115, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI115533560, Length=427, Percent_Identity=29.5081967213115, Blast_Score=162, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319602, Length=468, Percent_Identity=34.8290598290598, Blast_Score=286, Evalue=6e-78, Organism=Saccharomyces cerevisiae, GI6320279, Length=403, Percent_Identity=29.0322580645161, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6323537, Length=411, Percent_Identity=28.9537712895377, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6323917, Length=393, Percent_Identity=28.498727735369, Blast_Score=176, Evalue=6e-45, Organism=Drosophila melanogaster, GI19920676, Length=486, Percent_Identity=37.037037037037, Blast_Score=310, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 53426; Mature: 53294
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVVVSNRTYDPDSPTPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVG CCCEEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCC NMRLATIDMSQRDYDAFYLGYSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLP CEEEEEEECCCCCCCEEEEECCCCEEEEEHHEEEEHCCCEEEECHHHHHHHHHHHHHHHH LLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPPPQIMAAIPEHEWLMRSLFA CCCCCCEEEEECEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHH YDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD HHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEECCCCCHHHCCC DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFRAMLEMFPEMRKHATLIQIAA CCCCHHHHHHHHHHHHHHEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEC PSREDVSAYSRLRQQMDALCGSINGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCEEEEE PLRDGMNLVAKEFIAAQDAKNPGVLVLSRFAGAAEQLTDALLVNPYDIQGTARAIHAALT CCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC MPLEERVRRHAALLAQIRRHDVHHWAAGFLGALDGTNRPAQARRTRELADSVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SRLVVVSNRTYDPDSPTPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVG CCEEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCC NMRLATIDMSQRDYDAFYLGYSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLP CEEEEEEECCCCCCCEEEEECCCCEEEEEHHEEEEHCCCEEEECHHHHHHHHHHHHHHHH LLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPPPQIMAAIPEHEWLMRSLFA CCCCCCEEEEECEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHH YDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD HHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEECCCCCHHHCCC DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFRAMLEMFPEMRKHATLIQIAA CCCCHHHHHHHHHHHHHHEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEC PSREDVSAYSRLRQQMDALCGSINGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCEEEEE PLRDGMNLVAKEFIAAQDAKNPGVLVLSRFAGAAEQLTDALLVNPYDIQGTARAIHAALT CCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC MPLEERVRRHAALLAQIRRHDVHHWAAGFLGALDGTNRPAQARRTRELADSVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA