| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025171
Identifier: 238025171
GI number: 238025171
Start: 2297936
End: 2298703
Strand: Direct
Name: 238025171
Synonym: bglu_2g18420
Alternate gene names: NA
Gene position: 2297936-2298703 (Clockwise)
Preceding gene: 238025170
Following gene: 238025174
Centisome position: 81.28
GC content: 71.88
Gene sequence:
>768_bases ATGCTTGCCATGCTCGAGAAAGTCGTTGCGCACAACGGCCTCGTTGCCGCGTTCGCGCTGGTCGGCGTCGTGACCTGGAT ATCGGTGGTGCTGTCGCGGACCCTCACGCGCGGGCGCGTTCACGGCTCCGCGATCGCGATCCTGATCGGCCTCGCACTCG CCTACGCCGGCGGCGCCCTCACGCACGGCGCGAAAGGCATCGCCGACGTGCCGCTGTTCGCCGGCATCGGCCTGATGGGC GGGGCGATGCTGCGCGATTTCGCGATCGTCGCGACCGCCTTCGAGGTGCAGGCCACCGAGGCGCGCCGCGCCGGGCTGAT CGGCGTGGTGTCGCTGCTGCTCGGCACGCTGCTGCCGTTCATCGTGGGCGCGCTGGTGGCGCGCGCGTTCGGCTATACCG ACGCCGTCAGCATGACGACGATCGGCGCCGGCGCGGTGACCTACATCGTGGGCCCGGTAACGGGCGCCGCGATCGGCGCG AGTTCCGACGTGATCGCACTGAGCATCGCCACCGGGCTCGTGAAGGCCATCATCGTGATGGTCGGCACGCCGTTCGCGGC CGGCTTCCTCGGCCTGCGCACGCCGCGCTCGGCGATGATCTTCGGCGGCCTGGCCGGCACCGTCAGCGGCGTGACGGCGG GCCTGGCCGCCACCGACCGGCGCCTGGTGCCCTACGGTGCGCTGATCTCGACGTTCCACACCGGCGTGGGCTGCCTGCTC GGGCCGTCGGCGCTGTACTTCGCGACGCGGGCGATGGTCGGCGGCTGA
Upstream 100 bases:
>100_bases GGGCGCGGTGGCGATCTGCGCCTGCTGCATCGCCGTGCTCTCGCGCCTGGGCCACGACGATTCGGCGCTCGTGCCGGTCG AGCAATAAGCGGAGGCCGCC
Downstream 100 bases:
>100_bases GCCTGCAATCGCGCGCCGCGCGCGCAGCGGCAACGGCCGGCTCTCGATGGCGCGGCCGCCGGCGACGAGCCTGCCGGCGG CCATCGCGCGACCCGCGAGC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: Malonate/Sodium Symporter MadM Subunit; Malonate Transporter; Malonate Transporter Subunit MadM; MalonateSodium Symporter Subunit MadM; Malonate Transporter-Like Membrane Protein; Facilitator Superfamily Transporter; Malonate Transporter M Subunit; Signal Transduction Histidine Kinase LytS
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLAMLEKVVAHNGLVAAFALVGVVTWISVVLSRTLTRGRVHGSAIAILIGLALAYAGGALTHGAKGIADVPLFAGIGLMG GAMLRDFAIVATAFEVQATEARRAGLIGVVSLLLGTLLPFIVGALVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAAGFLGLRTPRSAMIFGGLAGTVSGVTAGLAATDRRLVPYGALISTFHTGVGCLL GPSALYFATRAMVGG
Sequences:
>Translated_255_residues MLAMLEKVVAHNGLVAAFALVGVVTWISVVLSRTLTRGRVHGSAIAILIGLALAYAGGALTHGAKGIADVPLFAGIGLMG GAMLRDFAIVATAFEVQATEARRAGLIGVVSLLLGTLLPFIVGALVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAAGFLGLRTPRSAMIFGGLAGTVSGVTAGLAATDRRLVPYGALISTFHTGVGCLL GPSALYFATRAMVGG >Mature_255_residues MLAMLEKVVAHNGLVAAFALVGVVTWISVVLSRTLTRGRVHGSAIAILIGLALAYAGGALTHGAKGIADVPLFAGIGLMG GAMLRDFAIVATAFEVQATEARRAGLIGVVSLLLGTLLPFIVGALVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAAGFLGLRTPRSAMIFGGLAGTVSGVTAGLAATDRRLVPYGALISTFHTGVGCLL GPSALYFATRAMVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25368; Mature: 25368
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAMLEKVVAHNGLVAAFALVGVVTWISVVLSRTLTRGRVHGSAIAILIGLALAYAGGAL CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH THGAKGIADVPLFAGIGLMGGAMLRDFAIVATAFEVQATEARRAGLIGVVSLLLGTLLPF HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGALVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCHHHHHHCCCCHHHHEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHH VGTPFAAGFLGLRTPRSAMIFGGLAGTVSGVTAGLAATDRRLVPYGALISTFHTGVGCLL HCCCHHHHHHHCCCCCHHHEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GPSALYFATRAMVGG CCHHHHHHHHHHCCC >Mature Secondary Structure MLAMLEKVVAHNGLVAAFALVGVVTWISVVLSRTLTRGRVHGSAIAILIGLALAYAGGAL CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH THGAKGIADVPLFAGIGLMGGAMLRDFAIVATAFEVQATEARRAGLIGVVSLLLGTLLPF HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGALVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCHHHHHHCCCCHHHHEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHH VGTPFAAGFLGLRTPRSAMIFGGLAGTVSGVTAGLAATDRRLVPYGALISTFHTGVGCLL HCCCHHHHHHHCCCCCHHHEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GPSALYFATRAMVGG CCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA