| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025169
Identifier: 238025169
GI number: 238025169
Start: 2295248
End: 2296975
Strand: Direct
Name: 238025169
Synonym: bglu_2g18400
Alternate gene names: NA
Gene position: 2295248-2296975 (Clockwise)
Preceding gene: 238025168
Following gene: 238025170
Centisome position: 81.18
GC content: 63.48
Gene sequence:
>1728_bases GTGACGTCGGTGAAAGATCGAGCCGGATACATTGAACGTGCCTCCGCTTGCGGCGGCTTACACGTCTTGTTCCGACTCAT AACCTTTCACGAGAATAATATGGACGGCAAGGTTAACGCTCATCGCCCTGCGGCGACCGCTCCCAATCCGGGGGCAGTGG CTGACGAAAGCACCGGCACCAGCCAAACAGTTGCCCCGACTCAACGGACGAGTTCCCACGCGCTGTCGGATCTGCCCTCG ACCTCGACGGTGCTCGCGCGTGAAGAGGCGCCGCCGCGCGAGGCACCGGTCATTCGCCCGTCCTCGCGCGAACGCTCGCA AACCGCCGCACCGCTGCCCACAGCCACACCGTCGCCCCAACACTCGTCTGCGCCAGCGCCGAGAAGACTGCCGCGTGCGA CGACTCATGCCTCGTCAGCGCAAGGGCCGGAACAGGCACCGGATCCCCGGACGATCAACGCGGCCGACGAGGCGGACACG GAGAGCTCGAGCAGCATCTATTTCGACGCCAGCAGCTCGTTCGGGGATATGGACGAAACGTTGCGGGATATGGACGACGT CTCCTTCACGAATTTTTCCAACGCCTTGGATAGACTGGATGACCCGGAATCTGCTCAGCAGCTCGGTCCCGTTCAGCAGG ACGCGAACCTCTCGGCACTGCAGCAGGCGCTCGCGATCGAGCACCGGCCCGAACCCACGACGGCAGAGCAGCGCACGCTG ACCAACAGCGTGCTTCAGTTGGCGAGCGACATTGTCAACAACAACATCGACAACCGGGCGGGCAAGCTGCTGACCTCCGC CGCCCATGCCTTTGTGTCGCGTGCGCTGACCGTGTACGGCCCGACCTTTCTTCGTCAACTCGTCGGCCAGGGCCTGGGTG AGGCGATGAGCGACAAGCATCTGTCGAAAGACGTGAAAGCGATGATCGGGCTTTTGCTGACGGCCGCGCCGATCGCGCTG CTTGTCGCCGGAATGATGCGCGACAAGGAAAAGGGAATCGCTACCGACACGAGCCGCAACTCACGTCTTGCGCTGATGGC GGTAGGCAGCGTGATGGGGCTGGCTGCGATCGGCACCGGCAGCATGGCGGGTGCCTCGGCCAGCCTGGGCGCCTTCGTGC TGTACTGCGCGATGCGCGACGGCATGCAACAGTTCGTCAAGCTCGGCGACAAGCATCCCAAGGAGCCGTCGTTCCGGCAA TCGCTCGCCGCCGGAACGGCATACACCGTGGACCAGATGGCGGTCGGCAGCGGCATGTCATATGCATCGTCGCCATCGGG CGCCGGCGCAGCAGGCCAGGCGCTGCAGACGGCTCATTCGGCCGAGCGCGCCGCGTGGAACATGGGTGGCGAACTCGCCG ACGACATGATTTCGACTGCGATCACCAAGGGCGGCATTCCGGAATTGAAGGTGTCGTTCGCGATACCGTCGCTGGACGAT TTCAAGAATACCGTGACGGGCGCCTTTCCAGCGCGCGCGACCTTGTTCACGGCAAGCACCTTGCTCTCGGAAATCGTCGC GGACAAGAGCCAGCACCTGAGCAAGAACACCCAGAACAACGTCAACAACCTGGCAGTGGCGCTATTGCTGGGTATGGTGA TGTACGCGCCGTTCGTGCAAATGGGCAAGACCAAGAGCCCGGCCAACCGCGGCGTGTCGATCCAAGAACTCGGCCCGAAC GACGAGATCGATCTGGAAGCCGGCCCGAGCACCCTGGCCCGCACCTGA
Upstream 100 bases:
>100_bases GCCCGGCCGCTCGAACCGAGCAGGATTTGCCGGGCGCCTGCCGCCGTTGATGCGGGGCAAAGGCTCCCGGGCTTCGTGAC ACACGACGCGAGTTCGTATT
Downstream 100 bases:
>100_bases CGGCACATGGCGCCGAGGCGGATCCCGCTGGTCCGTCTCGCGCCTAAGCCGGGAAAGCCGCGACTCGATCCGACAGCTAT CCGGTCCGACGGTGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MTSVKDRAGYIERASACGGLHVLFRLITFHENNMDGKVNAHRPAATAPNPGAVADESTGTSQTVAPTQRTSSHALSDLPS TSTVLAREEAPPREAPVIRPSSRERSQTAAPLPTATPSPQHSSAPAPRRLPRATTHASSAQGPEQAPDPRTINAADEADT ESSSSIYFDASSSFGDMDETLRDMDDVSFTNFSNALDRLDDPESAQQLGPVQQDANLSALQQALAIEHRPEPTTAEQRTL TNSVLQLASDIVNNNIDNRAGKLLTSAAHAFVSRALTVYGPTFLRQLVGQGLGEAMSDKHLSKDVKAMIGLLLTAAPIAL LVAGMMRDKEKGIATDTSRNSRLALMAVGSVMGLAAIGTGSMAGASASLGAFVLYCAMRDGMQQFVKLGDKHPKEPSFRQ SLAAGTAYTVDQMAVGSGMSYASSPSGAGAAGQALQTAHSAERAAWNMGGELADDMISTAITKGGIPELKVSFAIPSLDD FKNTVTGAFPARATLFTASTLLSEIVADKSQHLSKNTQNNVNNLAVALLLGMVMYAPFVQMGKTKSPANRGVSIQELGPN DEIDLEAGPSTLART
Sequences:
>Translated_575_residues MTSVKDRAGYIERASACGGLHVLFRLITFHENNMDGKVNAHRPAATAPNPGAVADESTGTSQTVAPTQRTSSHALSDLPS TSTVLAREEAPPREAPVIRPSSRERSQTAAPLPTATPSPQHSSAPAPRRLPRATTHASSAQGPEQAPDPRTINAADEADT ESSSSIYFDASSSFGDMDETLRDMDDVSFTNFSNALDRLDDPESAQQLGPVQQDANLSALQQALAIEHRPEPTTAEQRTL TNSVLQLASDIVNNNIDNRAGKLLTSAAHAFVSRALTVYGPTFLRQLVGQGLGEAMSDKHLSKDVKAMIGLLLTAAPIAL LVAGMMRDKEKGIATDTSRNSRLALMAVGSVMGLAAIGTGSMAGASASLGAFVLYCAMRDGMQQFVKLGDKHPKEPSFRQ SLAAGTAYTVDQMAVGSGMSYASSPSGAGAAGQALQTAHSAERAAWNMGGELADDMISTAITKGGIPELKVSFAIPSLDD FKNTVTGAFPARATLFTASTLLSEIVADKSQHLSKNTQNNVNNLAVALLLGMVMYAPFVQMGKTKSPANRGVSIQELGPN DEIDLEAGPSTLART >Mature_574_residues TSVKDRAGYIERASACGGLHVLFRLITFHENNMDGKVNAHRPAATAPNPGAVADESTGTSQTVAPTQRTSSHALSDLPST STVLAREEAPPREAPVIRPSSRERSQTAAPLPTATPSPQHSSAPAPRRLPRATTHASSAQGPEQAPDPRTINAADEADTE SSSSIYFDASSSFGDMDETLRDMDDVSFTNFSNALDRLDDPESAQQLGPVQQDANLSALQQALAIEHRPEPTTAEQRTLT NSVLQLASDIVNNNIDNRAGKLLTSAAHAFVSRALTVYGPTFLRQLVGQGLGEAMSDKHLSKDVKAMIGLLLTAAPIALL VAGMMRDKEKGIATDTSRNSRLALMAVGSVMGLAAIGTGSMAGASASLGAFVLYCAMRDGMQQFVKLGDKHPKEPSFRQS LAAGTAYTVDQMAVGSGMSYASSPSGAGAAGQALQTAHSAERAAWNMGGELADDMISTAITKGGIPELKVSFAIPSLDDF KNTVTGAFPARATLFTASTLLSEIVADKSQHLSKNTQNNVNNLAVALLLGMVMYAPFVQMGKTKSPANRGVSIQELGPND EIDLEAGPSTLART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60297; Mature: 60166
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVKDRAGYIERASACGGLHVLFRLITFHENNMDGKVNAHRPAATAPNPGAVADESTGT CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQTVAPTQRTSSHALSDLPSTSTVLAREEAPPREAPVIRPSSRERSQTAAPLPTATPSPQ CCCCCCCHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC HSSAPAPRRLPRATTHASSAQGPEQAPDPRTINAADEADTESSSSIYFDASSSFGDMDET CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCHHHH LRDMDDVSFTNFSNALDRLDDPESAQQLGPVQQDANLSALQQALAIEHRPEPTTAEQRTL HHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH TNSVLQLASDIVNNNIDNRAGKLLTSAAHAFVSRALTVYGPTFLRQLVGQGLGEAMSDKH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LSKDVKAMIGLLLTAAPIALLVAGMMRDKEKGIATDTSRNSRLALMAVGSVMGLAAIGTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC SMAGASASLGAFVLYCAMRDGMQQFVKLGDKHPKEPSFRQSLAAGTAYTVDQMAVGSGMS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC YASSPSGAGAAGQALQTAHSAERAAWNMGGELADDMISTAITKGGIPELKVSFAIPSLDD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH FKNTVTGAFPARATLFTASTLLSEIVADKSQHLSKNTQNNVNNLAVALLLGMVMYAPFVQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGKTKSPANRGVSIQELGPNDEIDLEAGPSTLART HCCCCCCHHCCCEEEECCCCCCEECCCCCHHHCCC >Mature Secondary Structure TSVKDRAGYIERASACGGLHVLFRLITFHENNMDGKVNAHRPAATAPNPGAVADESTGT CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQTVAPTQRTSSHALSDLPSTSTVLAREEAPPREAPVIRPSSRERSQTAAPLPTATPSPQ CCCCCCCHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC HSSAPAPRRLPRATTHASSAQGPEQAPDPRTINAADEADTESSSSIYFDASSSFGDMDET CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCHHHH LRDMDDVSFTNFSNALDRLDDPESAQQLGPVQQDANLSALQQALAIEHRPEPTTAEQRTL HHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH TNSVLQLASDIVNNNIDNRAGKLLTSAAHAFVSRALTVYGPTFLRQLVGQGLGEAMSDKH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LSKDVKAMIGLLLTAAPIALLVAGMMRDKEKGIATDTSRNSRLALMAVGSVMGLAAIGTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC SMAGASASLGAFVLYCAMRDGMQQFVKLGDKHPKEPSFRQSLAAGTAYTVDQMAVGSGMS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC YASSPSGAGAAGQALQTAHSAERAAWNMGGELADDMISTAITKGGIPELKVSFAIPSLDD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH FKNTVTGAFPARATLFTASTLLSEIVADKSQHLSKNTQNNVNNLAVALLLGMVMYAPFVQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGKTKSPANRGVSIQELGPNDEIDLEAGPSTLART HCCCCCCHHCCCEEEECCCCCCEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA