| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025168
Identifier: 238025168
GI number: 238025168
Start: 2294456
End: 2295097
Strand: Direct
Name: 238025168
Synonym: bglu_2g18390
Alternate gene names: NA
Gene position: 2294456-2295097 (Clockwise)
Preceding gene: 238025167
Following gene: 238025169
Centisome position: 81.15
GC content: 76.48
Gene sequence:
>642_bases ATGAAGACCGACGATCTGATATCGATGCTGGCCACCGGCGTGACGCCCGCGGACCCGCGCCTGCCGGCCAGGCGCTTCGC GACGGCGCTCGCGATCGGCGCGGCCGGCGCGCTGCTGCTGATGGCGGCCCTGCTCGGCATGCGCCGCGACCTCGCCGAGG TCGCGCTCACGCCGCTGTTCTGGGCCAAGCTGGCGCTGCCGCTCGCACTCGCGATCGGCGCGCTCGCCACGCTCGCCAGG CTCGCGCGCCCGGGTGCGCACGCCGGCCGCCCGAGCCTCCTGATCGCCGCGCCGGTGGCAGTGGCCTGGATCGCCGCGCT GGCCGTGCTGGCCGCCGCGCCGGCGGGCGACCGGCTCGCGCTCGTGCTCGGCTCGACCTGGCAGGTCTGTCCGTGGCTGA TCGCGCTGCTGTCGGTGCCGGGCTTGGTGGCGATCCTCGCCGCGCTCAGGCGCCTCGCGCCCACCCGCCTCGCGCTGGCT GGCGGCGTGGGCGGCCTGCTGTCGGGCGCCGTCGCGACGCTCGTCTACTGCCTGCATTGCCCGGAGATGGGCGTGCCGTT CTGGAGCGCCTGGTACCTGCTCGGCATGCTGGTGCCGAGCGCCGCGGGTGCCGCGATCGGGCCGCGCGTGCTGCGCTGGT GA
Upstream 100 bases:
>100_bases TGGCCGAAACGGCGCGGATGACCGGCCTGTCCGAATCGGCCGTGAAGATCGGAGTACACCGCGGCCTGAAGGCGCTGGCC GCGAAGATTCGGGGAACACG
Downstream 100 bases:
>100_bases CGGCCGGGCGCGCCGCCGCGCCGCGCGCTGCGACACGCCACCGAGCATTTGCCCGGCCGCTCGAACCGAGCAGGATTTGC CGGGCGCCTGCCGCCGTTGA
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW
Sequences:
>Translated_213_residues MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW >Mature_213_residues MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLFWAKLALPLALAIGALATLAR LARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLALVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALA GGVGGLLSGAVATLVYCLHCPEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW
Specific function: Unknown
COG id: COG4944
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21764; Mature: 21764
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLF CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAKLALPLALAIGALATLARLARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALAGGVGGLLSGAVATLVYCLHC EEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC PEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW CCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHCC >Mature Secondary Structure MKTDDLISMLATGVTPADPRLPARRFATALAIGAAGALLLMAALLGMRRDLAEVALTPLF CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAKLALPLALAIGALATLARLARPGAHAGRPSLLIAAPVAVAWIAALAVLAAAPAGDRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LVLGSTWQVCPWLIALLSVPGLVAILAALRRLAPTRLALAGGVGGLLSGAVATLVYCLHC EEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC PEMGVPFWSAWYLLGMLVPSAAGAAIGPRVLRW CCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA