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The map label for this gene is 238025167

Identifier: 238025167

GI number: 238025167

Start: 2293887

End: 2294459

Strand: Direct

Name: 238025167

Synonym: bglu_2g18380

Alternate gene names: NA

Gene position: 2293887-2294459 (Clockwise)

Preceding gene: 339717980

Following gene: 238025168

Centisome position: 81.13

GC content: 68.59

Gene sequence:

>573_bases
ATGGAGCGAATTCGAGACGGTGCCGCTCGGCAGCAGACCGAACAGGCGCTGCGGCAGTGGCTGCTGGCCGGCCTCGATGG
CGACGAGGCCGCCTATCGGCGCTTCCTGAGCGCGCTGTGCGCGTACCTGCGCGGCTTCGTGCGGCGCCGGCTCGCGAACC
GGCCCGCCGACGTGGAGGACCTGGTGCAGGAGATGCTGCTGGCGATCCACGACAAGCGGCACACGTATCGCGCCGGCGAG
CCGCTGACGGCCTGGGTCCACGCGATCGCGCGCTACAAGCTGATCGACGACTTCCGCGCCTGGTCCAGGCAGGACGCGCT
GAACCAAAGCTTCGACGACGAATCGGAGTGGCTCGCGGCCCCGGAGTCGGAACCGTTCGAGGCGCGACGCGATCTGGCCA
AGCTGCTCGACACGCTGCCGGACCGGCAGCGCCTGCCGATCTTGCATGTGAAGCTGGAAGGGTTGTCGGTGGCCGAAACG
GCGCGGATGACCGGCCTGTCCGAATCGGCCGTGAAGATCGGAGTACACCGCGGCCTGAAGGCGCTGGCCGCGAAGATTCG
GGGAACACGATGA

Upstream 100 bases:

>100_bases
GCGGACGGCGGCACGCCCCACGCCCGCGCCCGGACTCGCGAACGCGCGCCGCGGCATTCGCCGAAAGTATTTTTTCGGCT
TCCTGTAACCCGGACGACGC

Downstream 100 bases:

>100_bases
AGACCGACGATCTGATATCGATGCTGGCCACCGGCGTGACGCCCGCGGACCCGCGCCTGCCGGCCAGGCGCTTCGCGACG
GCGCTCGCGATCGGCGCGGC

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Q Factor; Extracytoplasmic Function AlteRNAtive Sigma Factor; ECF-Family Sigma Factor D; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma Factor SigD; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor NccH; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MERIRDGAARQQTEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVEDLVQEMLLAIHDKRHTYRAGE
PLTAWVHAIARYKLIDDFRAWSRQDALNQSFDDESEWLAAPESEPFEARRDLAKLLDTLPDRQRLPILHVKLEGLSVAET
ARMTGLSESAVKIGVHRGLKALAAKIRGTR

Sequences:

>Translated_190_residues
MERIRDGAARQQTEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVEDLVQEMLLAIHDKRHTYRAGE
PLTAWVHAIARYKLIDDFRAWSRQDALNQSFDDESEWLAAPESEPFEARRDLAKLLDTLPDRQRLPILHVKLEGLSVAET
ARMTGLSESAVKIGVHRGLKALAAKIRGTR
>Mature_190_residues
MERIRDGAARQQTEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVEDLVQEMLLAIHDKRHTYRAGE
PLTAWVHAIARYKLIDDFRAWSRQDALNQSFDDESEWLAAPESEPFEARRDLAKLLDTLPDRQRLPILHVKLEGLSVAET
ARMTGLSESAVKIGVHRGLKALAAKIRGTR

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21656; Mature: 21656

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIRDGAARQQTEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVED
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LVQEMLLAIHDKRHTYRAGEPLTAWVHAIARYKLIDDFRAWSRQDALNQSFDDESEWLAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PESEPFEARRDLAKLLDTLPDRQRLPILHVKLEGLSVAETARMTGLSESAVKIGVHRGLK
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHH
ALAAKIRGTR
HHHHHHCCCC
>Mature Secondary Structure
MERIRDGAARQQTEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVED
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LVQEMLLAIHDKRHTYRAGEPLTAWVHAIARYKLIDDFRAWSRQDALNQSFDDESEWLAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PESEPFEARRDLAKLLDTLPDRQRLPILHVKLEGLSVAETARMTGLSESAVKIGVHRGLK
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHH
ALAAKIRGTR
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA