Click here to switch to the map view.

The map label for this gene is hpcR [H]

Identifier: 238025132

GI number: 238025132

Start: 2246091

End: 2246531

Strand: Direct

Name: hpcR [H]

Synonym: bglu_2g17970

Alternate gene names: 238025132

Gene position: 2246091-2246531 (Clockwise)

Preceding gene: 238025131

Following gene: 238025134

Centisome position: 79.44

GC content: 65.76

Gene sequence:

>441_bases
ATGAATCGCACGATTGACCATCGCAATCTAACGATGTTGCTGCTGGAAGCTCGCGAGGCGCTGGTCGGCCGCTTCCGTCC
GATCCTCAAGGAAGCGTCGCTGACCGAGCAGCAATGGCGGATCATCCGCTTACTCGATGGCGAACCGCGTGGCGAACTCG
AAGCCGGCCAGATCGCCAAGCGCTGCTGCATCCTCAGCCCCAGCCTGACGGGCGTGCTCGAACGGCTCGAGCGCGACGGC
CTGATCACGCGCATGCGTTCGACCGAGGACCAGCGCCGGCTGCTCGTGGCACTGACCGAGCGCAGCCGCCAGCTGGCGCG
CAAGATCGGCCAGCGCATCGACGACCAGGATCGCCAGCTCGAACAACAACTCGGCGCGGACGGCCTGCGCGCGATCTATA
CCGCGCTCGACCGCCTGCTCGAAGTCGCCTCGGTTCACTAG

Upstream 100 bases:

>100_bases
GTATCGACATACGAATTTCATCGAAACAGGACGAGTCGAAAACATTTCGTCCTGTTAAGATTGTTACCTTGCTCGCAATA
CCAACACCGAACCGATTTAC

Downstream 100 bases:

>100_bases
CCGGTACATTTGTACGCGGCGCGAAGTCAGCCCGTCGCGCCGCTTCGGCACCGAGTCAGGACCACGGCCTGGCGACTCGC
CCTCCGTCCGTCAGGACAGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNRTIDHRNLTMLLLEAREALVGRFRPILKEASLTEQQWRIIRLLDGEPRGELEAGQIAKRCCILSPSLTGVLERLERDG
LITRMRSTEDQRRLLVALTERSRQLARKIGQRIDDQDRQLEQQLGADGLRAIYTALDRLLEVASVH

Sequences:

>Translated_146_residues
MNRTIDHRNLTMLLLEAREALVGRFRPILKEASLTEQQWRIIRLLDGEPRGELEAGQIAKRCCILSPSLTGVLERLERDG
LITRMRSTEDQRRLLVALTERSRQLARKIGQRIDDQDRQLEQQLGADGLRAIYTALDRLLEVASVH
>Mature_146_residues
MNRTIDHRNLTMLLLEAREALVGRFRPILKEASLTEQQWRIIRLLDGEPRGELEAGQIAKRCCILSPSLTGVLERLERDG
LITRMRSTEDQRRLLVALTERSRQLARKIGQRIDDQDRQLEQQLGADGLRAIYTALDRLLEVASVH

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16808; Mature: 16808

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51118 HTH_HXLR ; PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTIDHRNLTMLLLEAREALVGRFRPILKEASLTEQQWRIIRLLDGEPRGELEAGQIAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCHHHHHH
RCCILSPSLTGVLERLERDGLITRMRSTEDQRRLLVALTERSRQLARKIGQRIDDQDRQL
HHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
EQQLGADGLRAIYTALDRLLEVASVH
HHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRTIDHRNLTMLLLEAREALVGRFRPILKEASLTEQQWRIIRLLDGEPRGELEAGQIAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCHHHHHH
RCCILSPSLTGVLERLERDGLITRMRSTEDQRRLLVALTERSRQLARKIGQRIDDQDRQL
HHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
EQQLGADGLRAIYTALDRLLEVASVH
HHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]