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The map label for this gene is yhbU [H]

Identifier: 238025110

GI number: 238025110

Start: 2213532

End: 2214557

Strand: Direct

Name: yhbU [H]

Synonym: bglu_2g17690

Alternate gene names: 238025110

Gene position: 2213532-2214557 (Clockwise)

Preceding gene: 238025106

Following gene: 238025111

Centisome position: 78.29

GC content: 70.96

Gene sequence:

>1026_bases
ATGCCCGAACTGAAGATCCCCGAACTCGTCTGCCCCGCCGGCAATCTGCCCGCGCTGCGCGCGGCAGTGGACGGCGGCGC
CGATTGCGTCTATGTCGGGCTGAAGGGCGACACCAACGCGCGCGCGTTCCCGGGGCTGAACTTCGACCGCAACACGCTGG
CCGACGGCGTGCGGCATGCCCATGCGGCCGGCAGCCGGGTGCTGCTCGCGATCAACACCTACGCGAGCGGCGCCGACCTC
TCGCCCTGGACCCGCGCGATCGATCTGGCAGCCGGCATCGGCATCGACGCGATCATCGTCGCCGACCCCGCGCTGATGGC
CTACGCGGCGCGCGTCCATCCGTCGTTGCGGCTGCATCTGTCGGTGCAGGGCTCCGTCACGAGCCATGCCGGCATCAATT
TCCTGCGCGACGAATTCGGCATCCAGCGCGCCGTGCTGCCGCGCGTGCTCTCGCTCGAACAAATCGCCAACACCGTGGCC
AACACCTCGGTGGAAATCGAGGTATTCGGCTTCGGCAGCCTGTGCGTGATGGTCGAGGGCCGCTGCGCGCTGTCGGCCCA
TGCGAGCGGCGCCGCGCCGAACCTCGACGGCGTCTGCTCGCCGGCCCGCCACGTCCATTGGATCGAGCGCGAGGAAGCGG
GCCAGACCTGGCTCGACGCGCGCCTCGCCTCGGTGCTCGTCGACAGCTATCGCGCGGGCGAGCCGTCGAGCTATCCCACC
ATTTGCAAGGGGCGCTTCGAGGTCGGCGGCCAGCGCTATCACGCGCTCGAGGCGCCCACCAGCCTGAACGCGCTGTCGCT
GCTGCCCGAACTCGCGCGCATCGGCGTGCGCGCCGTCAAGATCGAGGGCCGGCAGCGCGGCCCGGCCTACACCGCCGCCG
TCACGCGCGTCTGGCGCGCGGCGCTCGACCGGCTCGCGCAGGAGGGCGACGCGATGAGCTTCGATCCCGCCTGGTCCTGC
TCGCTCGGCGCGCTGTCCGAAGGGCAGGCCGACACGCTCGGCGCCTATTCGCGCCCATGGAAATGA

Upstream 100 bases:

>100_bases
GCGCCGCCAATGAAGCCGGGCGCGCCTTCGCGTGCCCGGCGCAGCACCGATCCGGCAGCCTCGGGCGCGCCGGCCACCGT
CACGATCGACCAGGAATGCC

Downstream 100 bases:

>100_bases
TCCCCGCGATGAAACTCTCCCTTGGTCCGATCCAGTACTACTGGAGCCGCGACGACATCATGAAGTTCTACGACGAGGTG
GCGCGCACGCGCGTCGACAT

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPELKIPELVCPAGNLPALRAAVDGGADCVYVGLKGDTNARAFPGLNFDRNTLADGVRHAHAAGSRVLLAINTYASGADL
SPWTRAIDLAAGIGIDAIIVADPALMAYAARVHPSLRLHLSVQGSVTSHAGINFLRDEFGIQRAVLPRVLSLEQIANTVA
NTSVEIEVFGFGSLCVMVEGRCALSAHASGAAPNLDGVCSPARHVHWIEREEAGQTWLDARLASVLVDSYRAGEPSSYPT
ICKGRFEVGGQRYHALEAPTSLNALSLLPELARIGVRAVKIEGRQRGPAYTAAVTRVWRAALDRLAQEGDAMSFDPAWSC
SLGALSEGQADTLGAYSRPWK

Sequences:

>Translated_341_residues
MPELKIPELVCPAGNLPALRAAVDGGADCVYVGLKGDTNARAFPGLNFDRNTLADGVRHAHAAGSRVLLAINTYASGADL
SPWTRAIDLAAGIGIDAIIVADPALMAYAARVHPSLRLHLSVQGSVTSHAGINFLRDEFGIQRAVLPRVLSLEQIANTVA
NTSVEIEVFGFGSLCVMVEGRCALSAHASGAAPNLDGVCSPARHVHWIEREEAGQTWLDARLASVLVDSYRAGEPSSYPT
ICKGRFEVGGQRYHALEAPTSLNALSLLPELARIGVRAVKIEGRQRGPAYTAAVTRVWRAALDRLAQEGDAMSFDPAWSC
SLGALSEGQADTLGAYSRPWK
>Mature_340_residues
PELKIPELVCPAGNLPALRAAVDGGADCVYVGLKGDTNARAFPGLNFDRNTLADGVRHAHAAGSRVLLAINTYASGADLS
PWTRAIDLAAGIGIDAIIVADPALMAYAARVHPSLRLHLSVQGSVTSHAGINFLRDEFGIQRAVLPRVLSLEQIANTVAN
TSVEIEVFGFGSLCVMVEGRCALSAHASGAAPNLDGVCSPARHVHWIEREEAGQTWLDARLASVLVDSYRAGEPSSYPTI
CKGRFEVGGQRYHALEAPTSLNALSLLPELARIGVRAVKIEGRQRGPAYTAAVTRVWRAALDRLAQEGDAMSFDPAWSCS
LGALSEGQADTLGAYSRPWK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=336, Percent_Identity=51.4880952380952, Blast_Score=353, Evalue=8e-99,
Organism=Escherichia coli, GI1788397, Length=320, Percent_Identity=29.6875, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI87081910, Length=304, Percent_Identity=28.9473684210526, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36155; Mature: 36024

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELKIPELVCPAGNLPALRAAVDGGADCVYVGLKGDTNARAFPGLNFDRNTLADGVRHA
CCCCCCCCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
HAAGSRVLLAINTYASGADLSPWTRAIDLAAGIGIDAIIVADPALMAYAARVHPSLRLHL
HCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCEEEEE
SVQGSVTSHAGINFLRDEFGIQRAVLPRVLSLEQIANTVANTSVEIEVFGFGSLCVMVEG
EEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEC
RCALSAHASGAAPNLDGVCSPARHVHWIEREEAGQTWLDARLASVLVDSYRAGEPSSYPT
CEEEECCCCCCCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
ICKGRFEVGGQRYHALEAPTSLNALSLLPELARIGVRAVKIEGRQRGPAYTAAVTRVWRA
EECCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH
ALDRLAQEGDAMSFDPAWSCSLGALSEGQADTLGAYSRPWK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PELKIPELVCPAGNLPALRAAVDGGADCVYVGLKGDTNARAFPGLNFDRNTLADGVRHA
CCCCCCCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
HAAGSRVLLAINTYASGADLSPWTRAIDLAAGIGIDAIIVADPALMAYAARVHPSLRLHL
HCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCEEEEE
SVQGSVTSHAGINFLRDEFGIQRAVLPRVLSLEQIANTVANTSVEIEVFGFGSLCVMVEG
EEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEC
RCALSAHASGAAPNLDGVCSPARHVHWIEREEAGQTWLDARLASVLVDSYRAGEPSSYPT
CEEEECCCCCCCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
ICKGRFEVGGQRYHALEAPTSLNALSLLPELARIGVRAVKIEGRQRGPAYTAAVTRVWRA
EECCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH
ALDRLAQEGDAMSFDPAWSCSLGALSEGQADTLGAYSRPWK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]