| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yoaE [H]
Identifier: 238025102
GI number: 238025102
Start: 2203544
End: 2204299
Strand: Direct
Name: yoaE [H]
Synonym: bglu_2g17590
Alternate gene names: 238025102
Gene position: 2203544-2204299 (Clockwise)
Preceding gene: 238025099
Following gene: 238025103
Centisome position: 77.94
GC content: 67.59
Gene sequence:
>756_bases ATGGACCACCTGCTGACACTCGCCGCCGACCCGGCCGTCTGGGCCGCCCTCGTCACGCTGGTCACGATGGAAATCGTGCT CGGCATCGACAACCTGATCTTCATCTCGATCCTCAGCAACAAGCTGCCCGAGGCGCAACGCATGCGCACCCAGCGCATCG GCATCGGGCTCGCGCTGGTGATGCGGCTGGCCCTGCTCGGCACCGTGGCCTGGATCGCGCGCCTGACGCAGCCGGCCTTC ACGCTGTTCGATCACGCGTTCTCGTGGCGCGACATCATCCTGCTCGCGGGCGGCCTGTTCCTGGTCTGGAAGGCGACCCG CGAGATCCACCACCACGTCTCGCCGAGCGGCGGCGAGCCCGGCTCGAGCGGCGCGGGCACCGCGCTGCTCACGCCGTTCG CGGCCATCGGGCAGATTCTCGTGCTCGACCTGGTGTTCTCGGTCGACAGCATCGTGACCGCGATCGGCATGACCGAGCAC GTCGCGATCATGTTCGTGGCGGTAATCGCGGCCGTCGCCGTGATGATGTTCGCGGCCGGCCCGCTGTCGCGCTTCATCGA CCGCAACCCGACGATCGTGATGCTCGCGCTGAGCTTCCTGGTGGTGATCGGCATGACGCTGATCGCCGAAGGCTTCGGCA GCCATGTGCCGAAGGGCTATATCTACGCGGCGATGGCGTTCTCGGCGTTCGTGGAGGGGATGAACATGCTGTCGCGGCGC GCGAAGGCGAAGCGCGCGACGGGCGGCGGACACTGA
Upstream 100 bases:
>100_bases CCGATTGTTCATTCAGCTTGAAACTGGTTTTTCCGAAGTCCAAGATCGCCGATCATAACAAGCCCGATCATCTTCCACCG GATTCCGGAACCCGCCCGCC
Downstream 100 bases:
>100_bases GCGCCGCGCAGCGCGGCACCGCCGCGGCTCAGCGCTCGGCCGTCTGCAGGCCGCGTATCCGGCCCAGACGCTGCGCGGCG AGCCGCTGCGCCTCGCGGCG
Product: membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MDHLLTLAADPAVWAALVTLVTMEIVLGIDNLIFISILSNKLPEAQRMRTQRIGIGLALVMRLALLGTVAWIARLTQPAF TLFDHAFSWRDIILLAGGLFLVWKATREIHHHVSPSGGEPGSSGAGTALLTPFAAIGQILVLDLVFSVDSIVTAIGMTEH VAIMFVAVIAAVAVMMFAAGPLSRFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSAFVEGMNMLSRR AKAKRATGGGH
Sequences:
>Translated_251_residues MDHLLTLAADPAVWAALVTLVTMEIVLGIDNLIFISILSNKLPEAQRMRTQRIGIGLALVMRLALLGTVAWIARLTQPAF TLFDHAFSWRDIILLAGGLFLVWKATREIHHHVSPSGGEPGSSGAGTALLTPFAAIGQILVLDLVFSVDSIVTAIGMTEH VAIMFVAVIAAVAVMMFAAGPLSRFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSAFVEGMNMLSRR AKAKRATGGGH >Mature_251_residues MDHLLTLAADPAVWAALVTLVTMEIVLGIDNLIFISILSNKLPEAQRMRTQRIGIGLALVMRLALLGTVAWIARLTQPAF TLFDHAFSWRDIILLAGGLFLVWKATREIHHHVSPSGGEPGSSGAGTALLTPFAAIGQILVLDLVFSVDSIVTAIGMTEH VAIMFVAVIAAVAVMMFAAGPLSRFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSAFVEGMNMLSRR AKAKRATGGGH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=231, Percent_Identity=49.7835497835498, Blast_Score=248, Evalue=3e-67, Organism=Escherichia coli, GI1789197, Length=233, Percent_Identity=51.5021459227468, Blast_Score=224, Evalue=4e-60, Organism=Escherichia coli, GI87082033, Length=230, Percent_Identity=46.5217391304348, Blast_Score=213, Evalue=8e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26792; Mature: 26792
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHLLTLAADPAVWAALVTLVTMEIVLGIDNLIFISILSNKLPEAQRMRTQRIGIGLALV CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRLALLGTVAWIARLTQPAFTLFDHAFSWRDIILLAGGLFLVWKATREIHHHVSPSGGEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSSGAGTALLTPFAAIGQILVLDLVFSVDSIVTAIGMTEHVAIMFVAVIAAVAVMMFAAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLSRFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSAFVEGMNMLSRR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AKAKRATGGGH HHHHCCCCCCC >Mature Secondary Structure MDHLLTLAADPAVWAALVTLVTMEIVLGIDNLIFISILSNKLPEAQRMRTQRIGIGLALV CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRLALLGTVAWIARLTQPAFTLFDHAFSWRDIILLAGGLFLVWKATREIHHHVSPSGGEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSSGAGTALLTPFAAIGQILVLDLVFSVDSIVTAIGMTEHVAIMFVAVIAAVAVMMFAAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLSRFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSAFVEGMNMLSRR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AKAKRATGGGH HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]