| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is otsA [H]
Identifier: 238025080
GI number: 238025080
Start: 2175312
End: 2176718
Strand: Direct
Name: otsA [H]
Synonym: bglu_2g17360
Alternate gene names: 238025080
Gene position: 2175312-2176718 (Clockwise)
Preceding gene: 238025079
Following gene: 339717979
Centisome position: 76.94
GC content: 67.8
Gene sequence:
>1407_bases GTGGGCCGTCTCATCGTCGTATCGAACCGTACCGCCGACCCGGACAATGAAGCGCCGGGCGGCCTGGCCGTCGCGCTGAA CGAGAGTCTGCAGCAGCGCGGCGGCATCTGGTTCGGCTGGAGCGGCAAGCTCACCGAAGCCGACCCGGCTACCCAGCCAG TGCAGACGCGCGAAGTGGGCAACATGCGGCTCGCCACCATCGACATGTCGCAGCGCGACTACGACGCGTTCTATCTCGGC TACTCCAACAACGTGCTCTGGCCGGTGTTCCATTACCGGCTCGACCTCGCCAACTTCGACGTGCAGTTCAGCGACGGCTA TCGCCGCGTGAACCGGCTGTTCGCCCAGAAGCTGCTGCCCCTGCTCGAGCCCGACGACGTGCTCTGGGTCCACGACTATC ACCTGATCCCGCTCGCCACCGAACTGCGCGCCCAGGGCTGCCGCAACCGCATCGGCTTCTTCCTGCACATCCCCGTGCCG CCGCCGCAGATCATGGCCGCCATCCCCGAACACGAATGGCTGATGCGCTCGCTGTTCGCCTACGACCTGGTCGGCTTCCA GGCGCATACCGACGTCACCCACTTCGTGCGCTACGCCGAGGCCGAGGCCGAGGCGCAACTGATCGACGGCGAGCGGCTGC GCGCCTTCGGCCGCACCATCCGCGTCGGCGCGTTCCCGATCGGCATCGACGTCGACGGCTTCTCGCAGATGGCCACCGAC GACGACGGCCTCAACGTCTACGAACAGATGCGCGACGAATACTCGCGCCGCAAGCTGCTGCTCGGCGTGGACCGGCTCGA TTACTCGAAAGGGCTGCCGCAGCGCGTGCAGGCGTTCCGCGAAATGCTCGACCGCTACCCGGAAATGCGCCAGAGCGCCA CGCTGATCCAGATCGCCGCGCCCAGCCGCGAGGACGTGGACGCCTATGACCAGTTGCGCCAGGAAATGGATTCGCTGTGC GGCTCCGTGAATGGCGACTACGGCGAACTCGACTGGATGCCGGTACGCTACATCCACCGCAGCCTGGACCGCACCTCGCT GCCGGGCCTCTATCGCGCGAGCCGCGTGGCGCTCGTCACGCCGCTGCGCGACGGCATGAACCTGGTGGCCAAGGAATTCA TCGCCGCGCAGGACGCGAAGGACCCGGGCGTGCTGGTGCTCTCGCGCTTCGCCGGCGCCGCCGAGCAGCTGACCGACGCG CTGCTCGTGAATCCCTACGACATCCAGGGCACCGCGCGCGCGATCCACGCCGCGCTGACGATGCCGCTGGAGGAACGCGT GCGGCGCCATGCGGCGCTGCTCGAAGAGATCCGCAAGTACGACGTGCATTGGTGGAGCAACGGCTTCCTCGATGCGCTCG ACGACGCGCCGATCCCGCCGACGCGACGGCCCGCCGGGCTGGTTTGA
Upstream 100 bases:
>100_bases CGGCCCGCCCCGTCCGACCCGCCTCATCCGGCCCGCCCGCGCGACGTGTTCCGCGGGCCGGTCGCGCCATCATTCGCCAT CGCTATCAGGAGGTATCTCT
Downstream 100 bases:
>100_bases AGGCGTAACGCCGCGATCATGCGCGGCGGCGGGCCGCCGTGCGACCGGCGCGGCCGCGCCGCCGGCCCGCCGCTCCTGGC CCTATCGCCGTCCCGCGCTT
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MGRLIVVSNRTADPDNEAPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLG YSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVP PPQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFREMLDRYPEMRQSATLIQIAAPSREDVDAYDQLRQEMDSLC GSVNGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKDPGVLVLSRFAGAAEQLTDA LLVNPYDIQGTARAIHAALTMPLEERVRRHAALLEEIRKYDVHWWSNGFLDALDDAPIPPTRRPAGLV
Sequences:
>Translated_468_residues MGRLIVVSNRTADPDNEAPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLG YSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVP PPQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFREMLDRYPEMRQSATLIQIAAPSREDVDAYDQLRQEMDSLC GSVNGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKDPGVLVLSRFAGAAEQLTDA LLVNPYDIQGTARAIHAALTMPLEERVRRHAALLEEIRKYDVHWWSNGFLDALDDAPIPPTRRPAGLV >Mature_467_residues GRLIVVSNRTADPDNEAPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVGNMRLATIDMSQRDYDAFYLGY SNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLPLLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPP PQIMAAIPEHEWLMRSLFAYDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATDD DGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFREMLDRYPEMRQSATLIQIAAPSREDVDAYDQLRQEMDSLCG SVNGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVTPLRDGMNLVAKEFIAAQDAKDPGVLVLSRFAGAAEQLTDAL LVNPYDIQGTARAIHAALTMPLEERVRRHAALLEEIRKYDVHWWSNGFLDALDDAPIPPTRRPAGLV
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=455, Percent_Identity=46.5934065934066, Blast_Score=397, Evalue=1e-112, Organism=Caenorhabditis elegans, GI71987012, Length=430, Percent_Identity=28.8372093023256, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI115533558, Length=427, Percent_Identity=28.8056206088993, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI115533560, Length=427, Percent_Identity=28.8056206088993, Blast_Score=167, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6319602, Length=469, Percent_Identity=34.7547974413646, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6320279, Length=403, Percent_Identity=28.0397022332506, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6323537, Length=456, Percent_Identity=27.6315789473684, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6323917, Length=388, Percent_Identity=27.5773195876289, Blast_Score=175, Evalue=1e-44, Organism=Drosophila melanogaster, GI19920676, Length=484, Percent_Identity=37.1900826446281, Blast_Score=309, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 53027; Mature: 52896
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLIVVSNRTADPDNEAPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVG CCCEEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCC NMRLATIDMSQRDYDAFYLGYSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLP CEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEHCCCEEEECHHHHHHHHHHHHHHHH LLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPPPQIMAAIPEHEWLMRSLFA CCCCCCEEEEECEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHH YDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD HHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEEECCCCHHHCCC DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFREMLDRYPEMRQSATLIQIAA CCCCHHHHHHHHHHHHHEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC PSREDVDAYDQLRQEMDSLCGSVNGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCEEEEE PLRDGMNLVAKEFIAAQDAKDPGVLVLSRFAGAAEQLTDALLVNPYDIQGTARAIHAALT CCHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC MPLEERVRRHAALLEEIRKYDVHWWSNGFLDALDDAPIPPTRRPAGLV CCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GRLIVVSNRTADPDNEAPGGLAVALNESLQQRGGIWFGWSGKLTEADPATQPVQTREVG CCEEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCC NMRLATIDMSQRDYDAFYLGYSNNVLWPVFHYRLDLANFDVQFSDGYRRVNRLFAQKLLP CEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEHCCCEEEECHHHHHHHHHHHHHHHH LLEPDDVLWVHDYHLIPLATELRAQGCRNRIGFFLHIPVPPPQIMAAIPEHEWLMRSLFA CCCCCCEEEEECEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHH YDLVGFQAHTDVTHFVRYAEAEAEAQLIDGERLRAFGRTIRVGAFPIGIDVDGFSQMATD HHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEEECCCCHHHCCC DDGLNVYEQMRDEYSRRKLLLGVDRLDYSKGLPQRVQAFREMLDRYPEMRQSATLIQIAA CCCCHHHHHHHHHHHHHEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC PSREDVDAYDQLRQEMDSLCGSVNGDYGELDWMPVRYIHRSLDRTSLPGLYRASRVALVT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCEEEEE PLRDGMNLVAKEFIAAQDAKDPGVLVLSRFAGAAEQLTDALLVNPYDIQGTARAIHAALT CCHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC MPLEERVRRHAALLEEIRKYDVHWWSNGFLDALDDAPIPPTRRPAGLV CCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA