| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 339717979
Identifier: 339717979
GI number: 339717979
Start: 2177209
End: 2178942
Strand: Direct
Name: 339717979
Synonym: NA
Alternate gene names: NA
Gene position: 2177209-2178942 (Clockwise)
Preceding gene: 238025080
Following gene: 238025082
Centisome position: 77.01
GC content: 73.53
Gene sequence:
>1734_bases ATGTATACGCTACTCAACAAAACCGCGATCGCAGTCGGCATATCGTCGATGCTCGCCCTGCAAGGCTGCGGCGGCAGCGA CGCGCTGACGACGCCTAGCGGCGGCCAGCTCGGCGTGCAATCGACGTCGGGCGGCACCTCGGGCCTGATCTCCGGCACGA CGTCGGGTGGAACTTCGGGTGGAACTTCGGGTGGAACTTCGGGTGGAACTTCGGGCGGGTCTTCGGGTACTTCGGGTACT TCGGGTACTTCGGGTACTTCGGGTACTTCGGGTACTTCGGGTACTTCGGGTACTTCGGGCACCTCGGGCACCTCGGGCAC CTCGGGCACCTCGGGCACTTCCGGCACTTCCGGCACTTCCGGCACTTCCGGCACTTCCGGCACCTCGGGCACCTCGGGCA CCTCGGGCACTTCGGGCACTTCCGGCACTTCCGGCACTTCCGGCACTTCCGGCACTTCCGGCACCTCGGGCACCTCGGGC ACTTCCGGCACCGCCAGCACTCCACTCGGCACGGTTTTCACCCAGCTCGGCAACGTCGTCACCGCGACCGGCCAGACCGT CGTCGACGGGGGCCAGGCCGTGGAGGCCAGCTCGCTGCCGGTCGCGGCCGGCACCACGGCCAATGTCGGCAGCGCGGTGT CGAGCCTCGGCAGCGGCGTGGTCTCGCTCGGCAACGGGCTCGCGGCCGGCCTCGGCCAAGTCGGCACGGCGTCGAACCCG CTCGGCCCGACGCTGGGCTCGAGCGCCAACCTCGTATCGGATGCGGCCACCGCGGTCCAATCGCTCGGCAACGGGGTGGC CGCGCTCGGCGGCGGCCCGCTCGCGCCGCTCGCCCCGGTCACGCAGGCGCTCGGCTCGCTCGTGGGCACGGTGGGCGGGG TGGTCGGCAGCGCCGGCACGGGCCTCGGCACCACGCTATCGAGCACACCGGTGCAGCAGATCGAGACGCAGGCCGGCTCG CTGATCAACCCGATCACCAACGCCGTGTCCGGCGTGACCCAGACGGTGGGCACGGCCACCGGCCTCGGCGCCCCCGTCAA CAGCCTGCTCGGCACCCTCGGCGCGGGCCTCGGCAGCGCCGGCGCGGCGCTGGCCAACGCCAGCGGCAACCCGCTCGGCC AGGATCTCGGCAAGGTGGTCACGCAGCTCGGCAACACCGTCACGAGCACGGGCGGCCTGCTGACGGGCTCGGCCACCAAC CCGCTCTCGCCGTTGCTGAACCCGACCGGCTCGCTCGGCCTGAACCTCGGCCTCGGCGCCACGCTCGGCGGCACCAGCGG CGGCAGCTCGCCCGGCTCGGGCTCGGGCACGGTGGCCGGCCTCGGCACGCTGCTCACGCCGGTCACAAACCTGCTCGGCG GCCTGTCGGGCAGCGCCGGCGGCTCGGCCGGCGGCACCGCCTCGACGGGCCTCGGCGGCCTGCTCTCGCCGGTCACGAAT CTGGCTGGCTCGCTCACGGGCGGCGTGCAGGGTTCGCTGGGCGGCACCAGCGGCGCGACGGCCGGCGCGGGCGGCACGCT GACAGGCGCCGTCACCGGCGCGGCCGGCATCGTTGCGGGTGCAACCGGTTCGGCCGCCACCACGGCCGCCGGCTCGGTGA CGGGCACGGCCGCCGGCGCCACCGGCAAGCTGGCCGGCACCGCCACGGCCTCGGGCAGCACGTCCACTGGCCTGCTCTCG CCGGTGACGAACCTGGTGGGCGGCCTGCTCGGCGGACTCGGCGGCAGGAAATAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
NA
Sequences:
>Translated_577_residues MYTLLNKTAIAVGISSMLALQGCGGSDALTTPSGGQLGVQSTSGGTSGLISGTTSGGTSGGTSGGTSGGTSGGSSGTSGT SGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG TSGTASTPLGTVFTQLGNVVTATGQTVVDGGQAVEASSLPVAAGTTANVGSAVSSLGSGVVSLGNGLAAGLGQVGTASNP LGPTLGSSANLVSDAATAVQSLGNGVAALGGGPLAPLAPVTQALGSLVGTVGGVVGSAGTGLGTTLSSTPVQQIETQAGS LINPITNAVSGVTQTVGTATGLGAPVNSLLGTLGAGLGSAGAALANASGNPLGQDLGKVVTQLGNTVTSTGGLLTGSATN PLSPLLNPTGSLGLNLGLGATLGGTSGGSSPGSGSGTVAGLGTLLTPVTNLLGGLSGSAGGSAGGTASTGLGGLLSPVTN LAGSLTGGVQGSLGGTSGATAGAGGTLTGAVTGAAGIVAGATGSAATTAAGSVTGTAAGATGKLAGTATASGSTSTGLLS PVTNLVGGLLGGLGGRK >Mature_577_residues MYTLLNKTAIAVGISSMLALQGCGGSDALTTPSGGQLGVQSTSGGTSGLISGTTSGGTSGGTSGGTSGGTSGGSSGTSGT SGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG TSGTASTPLGTVFTQLGNVVTATGQTVVDGGQAVEASSLPVAAGTTANVGSAVSSLGSGVVSLGNGLAAGLGQVGTASNP LGPTLGSSANLVSDAATAVQSLGNGVAALGGGPLAPLAPVTQALGSLVGTVGGVVGSAGTGLGTTLSSTPVQQIETQAGS LINPITNAVSGVTQTVGTATGLGAPVNSLLGTLGAGLGSAGAALANASGNPLGQDLGKVVTQLGNTVTSTGGLLTGSATN PLSPLLNPTGSLGLNLGLGATLGGTSGGSSPGSGSGTVAGLGTLLTPVTNLLGGLSGSAGGSAGGTASTGLGGLLSPVTN LAGSLTGGVQGSLGGTSGATAGAGGTLTGAVTGAAGIVAGATGSAATTAAGSVTGTAAGATGKLAGTATASGSTSTGLLS PVTNLVGGLLGGLGGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50627; Mature: 50627
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTLLNKTAIAVGISSMLALQGCGGSDALTTPSGGQLGVQSTSGGTSGLISGTTSGGTSG CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCC GTSGGTSGGTSGGSSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTASTPLGTVFTQLGNVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEE TATGQTVVDGGQAVEASSLPVAAGTTANVGSAVSSLGSGVVSLGNGLAAGLGQVGTASNP EECCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC LGPTLGSSANLVSDAATAVQSLGNGVAALGGGPLAPLAPVTQALGSLVGTVGGVVGSAGT CCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GLGTTLSSTPVQQIETQAGSLINPITNAVSGVTQTVGTATGLGAPVNSLLGTLGAGLGSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC GAALANASGNPLGQDLGKVVTQLGNTVTSTGGLLTGSATNPLSPLLNPTGSLGLNLGLGA CHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHCCCCCCCCEECCCCC TLGGTSGGSSPGSGSGTVAGLGTLLTPVTNLLGGLSGSAGGSAGGTASTGLGGLLSPVTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHH LAGSLTGGVQGSLGGTSGATAGAGGTLTGAVTGAAGIVAGATGSAATTAAGSVTGTAAGA HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHEECCCCCCHHHCCCCCCCCCCCC TGKLAGTATASGSTSTGLLSPVTNLVGGLLGGLGGRK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYTLLNKTAIAVGISSMLALQGCGGSDALTTPSGGQLGVQSTSGGTSGLISGTTSGGTSG CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCC GTSGGTSGGTSGGSSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTASTPLGTVFTQLGNVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEE TATGQTVVDGGQAVEASSLPVAAGTTANVGSAVSSLGSGVVSLGNGLAAGLGQVGTASNP EECCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC LGPTLGSSANLVSDAATAVQSLGNGVAALGGGPLAPLAPVTQALGSLVGTVGGVVGSAGT CCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GLGTTLSSTPVQQIETQAGSLINPITNAVSGVTQTVGTATGLGAPVNSLLGTLGAGLGSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC GAALANASGNPLGQDLGKVVTQLGNTVTSTGGLLTGSATNPLSPLLNPTGSLGLNLGLGA CHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHCCCCCCCCEECCCCC TLGGTSGGSSPGSGSGTVAGLGTLLTPVTNLLGGLSGSAGGSAGGTASTGLGGLLSPVTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHH LAGSLTGGVQGSLGGTSGATAGAGGTLTGAVTGAAGIVAGATGSAATTAAGSVTGTAAGA HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHEECCCCCCHHHCCCCCCCCCCCC TGKLAGTATASGSTSTGLLSPVTNLVGGLLGGLGGRK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA