| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is est [H]
Identifier: 238024778
GI number: 238024778
Start: 1808946
End: 1809884
Strand: Reverse
Name: est [H]
Synonym: bglu_2g14160
Alternate gene names: 238024778
Gene position: 1809884-1808946 (Counterclockwise)
Preceding gene: 238024779
Following gene: 238024777
Centisome position: 64.01
GC content: 70.39
Gene sequence:
>939_bases ATGGCGAGCCTCGAGACGACCCGCGCCGACACCGCGAGCCGCCCGGCCCGCGCCTCGGCCGCCGCGCCGATCTTCGGCGA AGGCGATGGCCATGCCGTGCTGCTGCTGCACGGCCTGTCCAGTTCGCCGCTCGAATTGCGCTACCTGGCGCGCTACCTGC ACGAGGAAGGCTTCACGGTTTGCGCGCCGGTGCTCGACGGCTACAGCGCGGGCTCGTCCGAGCAGCCGATGGAGCGCTGG ATCGAGGGCGCGGTGCGCGAGTTCGATGCGCTCGCGGCGCGCTACGAGCGCGTCTCGGTGTGCGGGCTGTCGATCGGCGG GGCGCTCGCGCTGCGGCTGATCCAGGAGCGCCCGCAGGCGCAGGCGCTGGCGCTGCTGTCGCTGACGCTGGCCTACAACG GCTGGGCGATCCCGTGGTATCGCTTCATCCTCGACCTGGCCTACTACACGCCGCTGCGGCACCGCTACCGCTACCGCGAG GCCGAGCCGTTCGGCCTGCGCAACGAGGCGCTGCGCGCCAAGATCGCGCGAGCGATGGAGCGCGACGCGTTCAGCGAGGT CGGCCCGGCGGAAATCTCGCTGCCGGCGCTGCACCAGGCCAACCGGCTTGCGCGCCTGGCGCGCCAGGGGCTCGAGCGGA TCGAGAACGACACGCTGGTGATCCACGCGATCGACGACGAGACCTCGAGCCCGCGCAATCCGAACTACGTCATCGAGCGG ATCGGTGCAAGCTTTCTGCGCACCATCTGGCTCGACGATTCCTATCACATGATCACCTCGGACAACGAACGGGAAATCGT TGCGCGCGAGACCGCGCTGTTCCTCCGCGAGAGCGAGATCACGCACGGCGCCGGCAGCGGAGCGAATCCGCCGGTGGTGT CGAAGGCGCTCGCGCGGCGGCTGCGCCAGCTCGCGGCGGTGGCCCGCAAGAGCAAATGA
Upstream 100 bases:
>100_bases GACAGCGGCGGCGAGTTCCGCCTCACGCAGTGCCAATGCGAACGATTCACGACGCACGCGGGCGATTTCCTCGTGCTGCG CGTGGAGGAGCAAGGCTGAG
Downstream 100 bases:
>100_bases AATGAAGACCCTGTTCCTCTGGAAGACGGCGGCGCCGCTCGCCGCGATGCTGCTCGCCTCGGCCGCGCACGCCGGCCCCG ACGGCGCGGCCGACGGCAGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MASLETTRADTASRPARASAAAPIFGEGDGHAVLLLHGLSSSPLELRYLARYLHEEGFTVCAPVLDGYSAGSSEQPMERW IEGAVREFDALAARYERVSVCGLSIGGALALRLIQERPQAQALALLSLTLAYNGWAIPWYRFILDLAYYTPLRHRYRYRE AEPFGLRNEALRAKIARAMERDAFSEVGPAEISLPALHQANRLARLARQGLERIENDTLVIHAIDDETSSPRNPNYVIER IGASFLRTIWLDDSYHMITSDNEREIVARETALFLRESEITHGAGSGANPPVVSKALARRLRQLAAVARKSK
Sequences:
>Translated_312_residues MASLETTRADTASRPARASAAAPIFGEGDGHAVLLLHGLSSSPLELRYLARYLHEEGFTVCAPVLDGYSAGSSEQPMERW IEGAVREFDALAARYERVSVCGLSIGGALALRLIQERPQAQALALLSLTLAYNGWAIPWYRFILDLAYYTPLRHRYRYRE AEPFGLRNEALRAKIARAMERDAFSEVGPAEISLPALHQANRLARLARQGLERIENDTLVIHAIDDETSSPRNPNYVIER IGASFLRTIWLDDSYHMITSDNEREIVARETALFLRESEITHGAGSGANPPVVSKALARRLRQLAAVARKSK >Mature_311_residues ASLETTRADTASRPARASAAAPIFGEGDGHAVLLLHGLSSSPLELRYLARYLHEEGFTVCAPVLDGYSAGSSEQPMERWI EGAVREFDALAARYERVSVCGLSIGGALALRLIQERPQAQALALLSLTLAYNGWAIPWYRFILDLAYYTPLRHRYRYREA EPFGLRNEALRAKIARAMERDAFSEVGPAEISLPALHQANRLARLARQGLERIENDTLVIHAIDDETSSPRNPNYVIERI GASFLRTIWLDDSYHMITSDNEREIVARETALFLRESEITHGAGSGANPPVVSKALARRLRQLAAVARKSK
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 34637; Mature: 34506
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLETTRADTASRPARASAAAPIFGEGDGHAVLLLHGLSSSPLELRYLARYLHEEGFTV CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEE CAPVLDGYSAGSSEQPMERWIEGAVREFDALAARYERVSVCGLSIGGALALRLIQERPQA EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH QALALLSLTLAYNGWAIPWYRFILDLAYYTPLRHRYRYREAEPFGLRNEALRAKIARAME HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDAFSEVGPAEISLPALHQANRLARLARQGLERIENDTLVIHAIDDETSSPRNPNYVIER HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHH IGASFLRTIWLDDSYHMITSDNEREIVARETALFLRESEITHGAGSGANPPVVSKALARR HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH LRQLAAVARKSK HHHHHHHHHCCC >Mature Secondary Structure ASLETTRADTASRPARASAAAPIFGEGDGHAVLLLHGLSSSPLELRYLARYLHEEGFTV CCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEE CAPVLDGYSAGSSEQPMERWIEGAVREFDALAARYERVSVCGLSIGGALALRLIQERPQA EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH QALALLSLTLAYNGWAIPWYRFILDLAYYTPLRHRYRYREAEPFGLRNEALRAKIARAME HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDAFSEVGPAEISLPALHQANRLARLARQGLERIENDTLVIHAIDDETSSPRNPNYVIER HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHH IGASFLRTIWLDDSYHMITSDNEREIVARETALFLRESEITHGAGSGANPPVVSKALARR HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH LRQLAAVARKSK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]