| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024777
Identifier: 238024777
GI number: 238024777
Start: 1808144
End: 1808944
Strand: Reverse
Name: 238024777
Synonym: bglu_2g14150
Alternate gene names: NA
Gene position: 1808944-1808144 (Counterclockwise)
Preceding gene: 238024778
Following gene: 238024776
Centisome position: 63.98
GC content: 70.41
Gene sequence:
>801_bases ATGAAGACCCTGTTCCTCTGGAAGACGGCGGCGCCGCTCGCCGCGATGCTGCTCGCCTCGGCCGCGCACGCCGGCCCCGA CGGCGCGGCCGACGGCAGCGCCGGCGCCACGGCGTCGCCGTGGAAGATCACGGTCGGCCCGGGCGTCTACGTCGCCCCGC AGTATCCGGGCTCGCGGCATCTGAAGGCCTATCCGTTCCCGGCGCTCGACATCTCCTACCGCGACACGTTCTTCTCGCAA GGCCCGGACGTGCTCGGCTGGAACGTGCTGCACAGCGACACCTACCACCTCGGCGCGGCGATCAGCTTCGATTTCCAGTC GCGCGACGCGAACGACGACGGCCGGCTGCGCGGCCTGCCCGACGTCCACGACGGCCCGAAGCTGAAGCTGTTCGCCGACT ACACGGTGTGGGCGTTCACCGGGGCGCTGGCCGTCTATCGCGACGTGGTCGGCTACGGGCAGGGCACCACGGCCAGCGCC GATCTCTACGCCTCGCTGCCGCTCAAGGGCTGGCTGTTCTCGGTCGGCCCGGGCCTGACCTGGGCCAACGGCGCCTACAC GCGCACGCTGTTCGGCATCTCGCCGTCGGAAAGCGCCGCGTCCGGGCTGCCGCAATACGGCACCGGCGCCGGCATCCGCG ACATCCACCTGAACTTCTACATGACGCACGACTTCTCGCGCCACTGGGTCGGCACCGTCAATTCGACGCTCGGGCGGCTG CAGCGCTTCGCGGCGAACAGCCCGATCACGCAGCGCCGCACCGAATGGACCACGTTCGCCTCGCTCGGCTACCGGTTCTG A
Upstream 100 bases:
>100_bases ACGCACGGCGCCGGCAGCGGAGCGAATCCGCCGGTGGTGTCGAAGGCGCTCGCGCGGCGGCTGCGCCAGCTCGCGGCGGT GGCCCGCAAGAGCAAATGAA
Downstream 100 bases:
>100_bases CCGGCGCGCGCGCCGCCCGCGAACCGGCGCGCGGGGCGATTCGCCGGTAGCATGTGGTTCGGGCGGCGGCGGGCGGGGCG CACGCGCCGCTCGCCGCTGC
Product: MltA-interacting MipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKTLFLWKTAAPLAAMLLASAAHAGPDGAADGSAGATASPWKITVGPGVYVAPQYPGSRHLKAYPFPALDISYRDTFFSQ GPDVLGWNVLHSDTYHLGAAISFDFQSRDANDDGRLRGLPDVHDGPKLKLFADYTVWAFTGALAVYRDVVGYGQGTTASA DLYASLPLKGWLFSVGPGLTWANGAYTRTLFGISPSESAASGLPQYGTGAGIRDIHLNFYMTHDFSRHWVGTVNSTLGRL QRFAANSPITQRRTEWTTFASLGYRF
Sequences:
>Translated_266_residues MKTLFLWKTAAPLAAMLLASAAHAGPDGAADGSAGATASPWKITVGPGVYVAPQYPGSRHLKAYPFPALDISYRDTFFSQ GPDVLGWNVLHSDTYHLGAAISFDFQSRDANDDGRLRGLPDVHDGPKLKLFADYTVWAFTGALAVYRDVVGYGQGTTASA DLYASLPLKGWLFSVGPGLTWANGAYTRTLFGISPSESAASGLPQYGTGAGIRDIHLNFYMTHDFSRHWVGTVNSTLGRL QRFAANSPITQRRTEWTTFASLGYRF >Mature_266_residues MKTLFLWKTAAPLAAMLLASAAHAGPDGAADGSAGATASPWKITVGPGVYVAPQYPGSRHLKAYPFPALDISYRDTFFSQ GPDVLGWNVLHSDTYHLGAAISFDFQSRDANDDGRLRGLPDVHDGPKLKLFADYTVWAFTGALAVYRDVVGYGQGTTASA DLYASLPLKGWLFSVGPGLTWANGAYTRTLFGISPSESAASGLPQYGTGAGIRDIHLNFYMTHDFSRHWVGTVNSTLGRL QRFAANSPITQRRTEWTTFASLGYRF
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mipA/ompV family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010583 [H]
Pfam domain/function: PF06629 MipA [H]
EC number: NA
Molecular weight: Translated: 28720; Mature: 28720
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFLWKTAAPLAAMLLASAAHAGPDGAADGSAGATASPWKITVGPGVYVAPQYPGSRH CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCC LKAYPFPALDISYRDTFFSQGPDVLGWNVLHSDTYHLGAAISFDFQSRDANDDGRLRGLP EEECCCCCEECCHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCC DVHDGPKLKLFADYTVWAFTGALAVYRDVVGYGQGTTASADLYASLPLKGWLFSVGPGLT CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCE WANGAYTRTLFGISPSESAASGLPQYGTGAGIRDIHLNFYMTHDFSRHWVGTVNSTLGRL ECCCCEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCEEHHHHHHHHHH QRFAANSPITQRRTEWTTFASLGYRF HHHHCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MKTLFLWKTAAPLAAMLLASAAHAGPDGAADGSAGATASPWKITVGPGVYVAPQYPGSRH CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCC LKAYPFPALDISYRDTFFSQGPDVLGWNVLHSDTYHLGAAISFDFQSRDANDDGRLRGLP EEECCCCCEECCHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCC DVHDGPKLKLFADYTVWAFTGALAVYRDVVGYGQGTTASADLYASLPLKGWLFSVGPGLT CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCE WANGAYTRTLFGISPSESAASGLPQYGTGAGIRDIHLNFYMTHDFSRHWVGTVNSTLGRL ECCCCEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCEEHHHHHHHHHH QRFAANSPITQRRTEWTTFASLGYRF HHHHCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]