| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024745
Identifier: 238024745
GI number: 238024745
Start: 1770550
End: 1771563
Strand: Reverse
Name: 238024745
Synonym: bglu_2g13820
Alternate gene names: NA
Gene position: 1771563-1770550 (Counterclockwise)
Preceding gene: 238024746
Following gene: 238024744
Centisome position: 62.66
GC content: 75.54
Gene sequence:
>1014_bases ATGCCCCCCGACCTCGAGGGCAGCCACGACGAACGCGCGCCGAACGAACGGCCCGTCGACGTGATCGCCCCGCAGCATCT GAGCGTCGCCACGCCGGCCGGCGCCGGCACCGTGCCGCTGTACACCAGCGGCGAGTGGAACGCACCGCAACCGGGCGTGC GCAGTGCCGTGATCCTGCTGCACGGCCGGCTGCGCAACGCCGACGCGTATTTTCGGCTCGCCCGGCGCGCACGCGCCGCG GCCGGCCGCCATGCCGAGCACGCGGTGCTGCTGGTGCCGCAGTTCCTCGCGCGGGCCGACGCCGAGGCGCATCGTCTGCC GGCCTCGACGCTGGTCTGGGACTGGACCGGCTGGATGGGCGGCGGCGAGGCGCTCGCGCCCGCGCCGGTCAGCTCGTTCG AGGTGATCGACGCGCTGCTGGCCGCGCTGGCCGACGCGCGCGGGTTTCCCGCGCTGCGCGAGGTGGTGGTGGCCGGCCAC TCGGGCGGCGGCCAGGTCGCGCAGCGCTACGCCGTGCTGGCACGCGGCGAGGCGGCGCTGACCGAACGCGGCGTGGCGCT GCGCTACGTGATCGCGAATCCATCCTCCTACGTGTATTTCGACGCGCTGCGCCCCGATGCCGGCGCTGGCTTCTCGGCCT ACGACGCGGCGCGCTGCGCCGGCTTCAACGCCTGGAAGTACGGGCTCGAGGCGCTGCCGCCCTATGCCAGCGGGCAGGCC GCCGCGGCCGAGCCGGGTGCCTTCGAGCGCGCCTACCTGAAGCGCGACGTGACGATGCTGCTCGGCGAGCGCGACTGCGA CCCGCAGCATCCGGCGCTCGACCGCTCGTGCGCGGCGATGGCGCAGGGCGCGCACCGGCTCGAGCGCGGGCTCGCCTACG CGCGCTACATCGCGGCGCGCGCGCCGGCCGGCTGCACGCATGCGACGCACCGGATTCCCGGCGCGGGCCATGACGCCGAC GCGGTGTTCGGCTCGCCGGCCGGCATCGCGGCATTGTTCGGCGAGCCGGCGTAA
Upstream 100 bases:
>100_bases CCGGTTTCGTCTCGCTGGCGCTGGTCGGGTCGTGCCGTCGCGGGCACCCCGGGCTCGGCGTCGAGGCACCCGTCACGCCG AGGACGCCCGCTTGAGCACC
Downstream 100 bases:
>100_bases CGGTGCGCGCGCCGTATACTGGCGGCCCTCAAGCGACGTCCCTCGAACCCAGCCGTGCCCCATACACCCGACACGCCATC CGCCGCCGGCCCCGTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MPPDLEGSHDERAPNERPVDVIAPQHLSVATPAGAGTVPLYTSGEWNAPQPGVRSAVILLHGRLRNADAYFRLARRARAA AGRHAEHAVLLVPQFLARADAEAHRLPASTLVWDWTGWMGGGEALAPAPVSSFEVIDALLAALADARGFPALREVVVAGH SGGGQVAQRYAVLARGEAALTERGVALRYVIANPSSYVYFDALRPDAGAGFSAYDAARCAGFNAWKYGLEALPPYASGQA AAAEPGAFERAYLKRDVTMLLGERDCDPQHPALDRSCAAMAQGAHRLERGLAYARYIAARAPAGCTHATHRIPGAGHDAD AVFGSPAGIAALFGEPA
Sequences:
>Translated_337_residues MPPDLEGSHDERAPNERPVDVIAPQHLSVATPAGAGTVPLYTSGEWNAPQPGVRSAVILLHGRLRNADAYFRLARRARAA AGRHAEHAVLLVPQFLARADAEAHRLPASTLVWDWTGWMGGGEALAPAPVSSFEVIDALLAALADARGFPALREVVVAGH SGGGQVAQRYAVLARGEAALTERGVALRYVIANPSSYVYFDALRPDAGAGFSAYDAARCAGFNAWKYGLEALPPYASGQA AAAEPGAFERAYLKRDVTMLLGERDCDPQHPALDRSCAAMAQGAHRLERGLAYARYIAARAPAGCTHATHRIPGAGHDAD AVFGSPAGIAALFGEPA >Mature_336_residues PPDLEGSHDERAPNERPVDVIAPQHLSVATPAGAGTVPLYTSGEWNAPQPGVRSAVILLHGRLRNADAYFRLARRARAAA GRHAEHAVLLVPQFLARADAEAHRLPASTLVWDWTGWMGGGEALAPAPVSSFEVIDALLAALADARGFPALREVVVAGHS GGGQVAQRYAVLARGEAALTERGVALRYVIANPSSYVYFDALRPDAGAGFSAYDAARCAGFNAWKYGLEALPPYASGQAA AAEPGAFERAYLKRDVTMLLGERDCDPQHPALDRSCAAMAQGAHRLERGLAYARYIAARAPAGCTHATHRIPGAGHDADA VFGSPAGIAALFGEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35392; Mature: 35261
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDLEGSHDERAPNERPVDVIAPQHLSVATPAGAGTVPLYTSGEWNAPQPGVRSAVILL CCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCHHEEEEEE HGRLRNADAYFRLARRARAAAGRHAEHAVLLVPQFLARADAEAHRLPASTLVWDWTGWMG ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCHHHHCCCCCEEEECCCCCC GGEALAPAPVSSFEVIDALLAALADARGFPALREVVVAGHSGGGQVAQRYAVLARGEAAL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH TERGVALRYVIANPSSYVYFDALRPDAGAGFSAYDAARCAGFNAWKYGLEALPPYASGQA HHCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC AAAEPGAFERAYLKRDVTMLLGERDCDPQHPALDRSCAAMAQGAHRLERGLAYARYIAAR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APAGCTHATHRIPGAGHDADAVFGSPAGIAALFGEPA CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure PPDLEGSHDERAPNERPVDVIAPQHLSVATPAGAGTVPLYTSGEWNAPQPGVRSAVILL CCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCHHEEEEEE HGRLRNADAYFRLARRARAAAGRHAEHAVLLVPQFLARADAEAHRLPASTLVWDWTGWMG ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCHHHHCCCCCEEEECCCCCC GGEALAPAPVSSFEVIDALLAALADARGFPALREVVVAGHSGGGQVAQRYAVLARGEAAL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH TERGVALRYVIANPSSYVYFDALRPDAGAGFSAYDAARCAGFNAWKYGLEALPPYASGQA HHCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC AAAEPGAFERAYLKRDVTMLLGERDCDPQHPALDRSCAAMAQGAHRLERGLAYARYIAAR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APAGCTHATHRIPGAGHDADAVFGSPAGIAALFGEPA CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA